EY702820

Overview
NameEY702820
Unique NameEY702820
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702820 vs. ExPASy Swiss-Prot
Match: TM205_XENLA (Transmembrane protein 205 OS=Xenopus laevis GN=tmem205 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.224e-25
Identity = 56/159 (35.22%), Postives = 92/159 (57.86%), Query Frame = 2
Query:  176 LKLAHLLCFSTAWGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSLVGVCCSIAVASFAYLHPWKSSSTAEKYQLGFLLSAFAFNLTNLVVFTPMTIEMMKQRHKVEREENIGDEVGWTKNRG----VAKSNPKLAAMNKKFGMIHGLSSLANIM 640
            +K+ HLL  S +WG   W+TF+ G ++ K +PRH FG +QSK+FP Y  +V  C  I++A +A  HP +  S +E  Q+    ++          F+P+T + M + H +ERE ++G  VG + N+     + + +PK  A+ K+F   HG+SSL N++
Sbjct:   11 VKIFHLLVLSASWGMQCWMTFVAGFVLIKGVPRHTFGLVQSKLFPYYNHIVLCCSFISLAIYAAYHPRELLSPSESVQISLFFTSLLVAALQARWFSPVTTKTMFKMHVIEREHSLGQGVGLSANKEGYQLLQEKDPKYKALRKRFMRYHGISSLCNLL 169          
BLAST of EY702820 vs. ExPASy Swiss-Prot
Match: TM205_XENTR (Transmembrane protein 205 OS=Xenopus tropicalis GN=tmem205 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.017e-23
Identity = 54/159 (33.96%), Postives = 89/159 (55.97%), Query Frame = 2
Query:  176 LKLAHLLCFSTAWGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSLVGVCCSIAVASFAYLHPWKSSSTAEKYQLGFLLSAFAFNLTNLVVFTPMTIEMMKQRHKVEREENIGDEVGWTKNR----GVAKSNPKLAAMNKKFGMIHGLSSLANIM 640
            ++  HLL  S +WG   W TF+ G ++ + +PRH FG +QSK+FP Y  +V  C  I++A +A  HP +  S +E  Q+            +   F+P+T + M + H +ERE ++G  VG + NR     + + +PK  A+ ++F   HG+SSL N++
Sbjct:   11 VRTIHLLVLSASWGMQCWTTFVAGFVLIRGVPRHTFGLVQSKLFPFYNHIVLCCSFISLAIYAAYHPRELLSPSESVQITLFFVCLLAAALHARWFSPVTTKTMFKMHIIEREHSLGQGVGLSANREAYQRLQEKDPKYKALRQRFMRYHGISSLCNLL 169          
BLAST of EY702820 vs. ExPASy Swiss-Prot
Match: TM205_HUMAN (Transmembrane protein 205 OS=Homo sapiens GN=TMEM205 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.017e-23
Identity = 64/178 (35.96%), Postives = 89/178 (50.00%), Query Frame = 2
Query:  164 LSPFLKLAHLLCFSTAWGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSLVGVCCSIAVASFAYLHPWKSSSTAEKYQLGFLLSAFAFNLTNLVVFTPMTIEMMKQRHKVEREENIGDEV-----GWTKNRGVAKSNPKLAAMNKKFGMIHGLSSLANIMSFGSLAMHSWYLAG 682
            L   +K+ HLL  S AWG  +WVTF+ G ++F++LPRH FG +QSK+FP YF +   C  I +   A  H W   +  E  QL  L  +      N     P T   M     VE+E  +G EV     G    R + + +PK +A+ + F   HGLSSL N+   G +  +   LAG
Sbjct:    7 LGGLIKMVHLLVLSGAWGMQMWVTFVSGFLLFRSLPRHTFGLVQSKLFPFYFHISMGCAFINLCILASQHAWAQLTFWEASQLYLLFLSLTLATVNARWLEPRTTAAMWALQTVEKERGLGGEVPGSHQGPDPYRQLREKDPKYSALRQNFFRYHGLSSLCNL---GCVLSNGLCLAG 181          
BLAST of EY702820 vs. ExPASy Swiss-Prot
Match: TM205_PONAB (Transmembrane protein 205 OS=Pongo abelii GN=TMEM205 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.941e-23
Identity = 63/178 (35.39%), Postives = 89/178 (50.00%), Query Frame = 2
Query:  164 LSPFLKLAHLLCFSTAWGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSLVGVCCSIAVASFAYLHPWKSSSTAEKYQLGFLLSAFAFNLTNLVVFTPMTIEMMKQRHKVEREENIGDEV-----GWTKNRGVAKSNPKLAAMNKKFGMIHGLSSLANIMSFGSLAMHSWYLAG 682
            L   +K+ HLL  S AWG  +WVTF+ G ++F++LPRH FG +QSK+FP YF +   C  + +   A  H W   +  E  QL  L  +      N     P T   M     VE+E  +G EV     G    R + + +PK +A+ + F   HGLSSL N+   G +  +   LAG
Sbjct:    7 LGGLIKMVHLLVLSGAWGMQMWVTFVSGFLLFRSLPRHTFGLVQSKLFPFYFHISMGCAFVNLCILASQHAWAQLTFWEASQLYLLFLSLTLATVNARWLEPRTTAAMWALQTVEKERGLGGEVPGSHQGPDPYRQLREKDPKYSALRQNFFRYHGLSSLCNL---GCVLSNGLCLAG 181          
BLAST of EY702820 vs. ExPASy Swiss-Prot
Match: TM205_MOUSE (Transmembrane protein 205 OS=Mus musculus GN=Tmem205 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.357e-22
Identity = 59/159 (37.11%), Postives = 83/159 (52.20%), Query Frame = 2
Query:  176 LKLAHLLCFSTAWGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSLVGVCCSIAVASFAYLHPWKSSSTAEKYQLGFLLSAFAFNLTNLVVFTPMTIEMMKQRHKVEREENIGDEV-----GWTKNRGVAKSNPKLAAMNKKFGMIHGLSSLANI 637
            +K+ HLL  S AWG  +WVTFI G ++F++LPRH FG +QSK+FP YF +   C  I +   A    W   +  E  QL  LL +      N       T  +M+    +E+E  +G EV     G    R +   +PK +A+ +KF   HGLSSL N+
Sbjct:   11 IKVIHLLVLSGAWGMQVWVTFISGFLLFRSLPRHTFGLVQSKVFPVYFHVSLGCAFINLCILAPQRAWIHLTLWEVSQLSLLLLSLTLATINARWLEARTTAVMRALQSIEKERGLGTEVPGNFQGPDPYRQLRDKDPKYSALRRKFYHYHGLSSLCNL 169          
BLAST of EY702820 vs. ExPASy Swiss-Prot
Match: TM205_BOVIN (Transmembrane protein 205 OS=Bos taurus GN=TMEM205 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.292e-21
Identity = 62/173 (35.84%), Postives = 85/173 (49.13%), Query Frame = 2
Query:  179 KLAHLLCFSTAWGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSLVGVCCSIAVASFAYLHPWKSSSTAEKYQLGFLLSAFAFNLTNLVVFTPMTIEMMKQRHKVEREENIGDEV-----GWTKNRGVAKSNPKLAAMNKKFGMIHGLSSLANIMSFGSLAMHSWYLAG 682
            K+ HLL  S AWG  +WVTFI G ++F+ LPRH FG +QSK+FP YF +   C  + +   A    W   +  E  QL  LL +      N       T   M     VE+E  +G EV     G      +   +PK +A+ ++F   HGLSSL N+   G L  +  +LAG
Sbjct:   12 KVVHLLVLSGAWGMQMWVTFISGFVLFRGLPRHTFGLVQSKLFPFYFHISMGCAFVNLCILASQCSWAQLTFWEASQLFLLLLSLTLATINARWLESRTTAAMWALQTVEKERGLGGEVPGSHQGSDPYHQLRGQDPKYSALRQQFFRYHGLSSLCNL---GCLLSNGLHLAG 181          
BLAST of EY702820 vs. ExPASy Swiss-Prot
Match: TM205_DANRE (Transmembrane protein 205 OS=Danio rerio GN=tmem205 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.402e-20
Identity = 55/173 (31.79%), Postives = 88/173 (50.87%), Query Frame = 2
Query:  173 FLKLAHLLCFSTAWGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSLVGVCCSIAVASFAYLHPWKSSSTAEKYQLGFLLSAFAFNLTNLVVFTPMTIEMMKQRHKVEREENIGDEVGWTKNR----GVAKSNPKLAAMNKKFGMIHGLSSLANIMSFGSLAMHSWYLA 679
            F+K+ HLL  S  WG  +WV+FI G ++   +  H FG +QSK+FP YF  +    ++++A +A  HP +     E  Q+     A      N   F P   E M    ++E+E  +G++VG + NR     + + +PK       F   HGLS+L N++ F  + ++  YLA
Sbjct:   10 FVKVLHLLVISFTWGMQVWVSFIAGFVLISQVSMHTFGLVQSKLFPVYFYCLLGGNAVSLAVYAVYHPRELLDWHEGIQMSLFFVAVIMAGLNAQWFGPSATENMLVMQEIEKEHGLGNQVGMSSNREGYTKLREQDPKYKEHRSTFYRYHGLSNLCNLIGFFCITVNLIYLA 182          
The following BLAST results are available for this feature:
BLAST of EY702820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
TM205_XENLA3.224e-2535.22Transmembrane protein 205 OS=Xenopus laevis GN=tme... [more]
TM205_XENTR3.017e-2333.96Transmembrane protein 205 OS=Xenopus tropicalis GN... [more]
TM205_HUMAN3.017e-2335.96Transmembrane protein 205 OS=Homo sapiens GN=TMEM2... [more]
TM205_PONAB3.941e-2335.39Transmembrane protein 205 OS=Pongo abelii GN=TMEM2... [more]
TM205_MOUSE4.357e-2237.11Transmembrane protein 205 OS=Mus musculus GN=Tmem2... [more]
TM205_BOVIN6.292e-2135.84Transmembrane protein 205 OS=Bos taurus GN=TMEM205... [more]
TM205_DANRE1.402e-2031.79Transmembrane protein 205 OS=Danio rerio GN=tmem20... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-F05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702820 ID=EY702820; Name=EY702820; organism=Citrus sinensis; type=EST; length=923bp
TTCCCGACCCACGCGTCCGGTTAATCTGAGGGCGTGAGGTCAGAGTAAGA
GAGAAATGGCTTGGCTAACAAGATTCCTGGCAGCCGTGGCTTTCTTAGCC
ATCGGAGTGATATTCTCACCTGAGACATTTGGATCAAAATCGGACGGCCT
TAATTCATCCAAGCTATCGCCCTTCCTGAAGCTGGCTCATCTCCTCTGCT
TCTCCACTGCTTGGGGCGCAGCTCTTTGGGTCACCTTCATCGGCGGCATC
ATCATGTTCAAGAACCTACCAAGGCATCAGTTTGGTAATCTACAAAGCAA
GATGTTTCCAGCATATTTTTCGCTAGTAGGAGTGTGCTGTTCAATAGCTG
TTGCATCATTTGCATATCTGCATCCGTGGAAGTCATCATCCACTGCTGAA
AAGTACCAGCTCGGCTTCCTACTCTCTGCTTTTGCTTTCAATCTCACCAA
TTTGGTTGTCTTCACACCCATGACCATTGAGATGATGAAGCAGAGGCACA
AAGTGGAGAGAGAAGAGAACATTGGAGATGAAGTTGGGTGGACAAAGAAC
AGGGGAGTTGCAAAGTCTAACCCAAAGCTTGCAGCGATGAATAAGAAGTT
TGGAATGATTCATGGATTATCATCCCTTGCTAATATCATGTCATTTGGCA
GCCTTGCCATGCACTCTTGGTATTTGGCTGGTAAGATCAATCTTTAACTG
TATCAGAGTGTCATCTCCATATCCCTTCATTTGGATATTTGGGACGCTGG
TTCACTTCATCATACATGATGCATTGACTTTGGACACTGTATTGGGGCAT
GTGCACCTTAAGAATAATTCACTATATTCTAAGGATAATTCACCATATGG
CATTAAATGGAAATTGACTCTCGTTTAATTGATGAAATAAAGGTGGGCAG
GATCAAAAAGAAAAAAAAAGGGC
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