EY649681

Overview
NameEY649681
Unique NameEY649681
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649681 vs. ExPASy Swiss-Prot
Match: U420_DICDI (UPF0420 protein OS=Dictyostelium discoideum GN=DDB_G0277179 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.753e-15
Identity = 53/201 (26.37%), Postives = 93/201 (46.27%), Query Frame = 1
Query:  148 DTRLQGSQFSDTNLSWLPNVVKDFLLPAGFPGSVSDDYLGYMLLQFPTNVTGWICHAIVTSSLLKAVGIDSFSGTTXXXXXXXIKWVSKDGIGAVGRLFIGGRFGNLFDDDPKQWRMYADFIGSAGSIFDLATQVYPA-YFLPLASLGNLSKAVARGLKDPSFRVIQNHFAISGNLXXXXXXXXXXXXXXPVFGLALGILI 747
            D RL   +  + N S   NV+ +  LP G+P SV+ DY GY        +   I   + T ++LK  G+   S T         +W+ +DG+G +GR+    R G   D + K+WR  AD + + G  F++ + ++ +  FLPL+ +G ++K++       +   +  HFA   NL               + G+ L +++
Sbjct:   40 DDRLNFLETIEKN-SGFYNVLCELFLPNGYPDSVTTDYFGYQFWDSIQALCSTITGTLATRAILKGYGVGDSSATVASATT---QWLIRDGMGMIGRIVFAWRKGTDLDCNSKKWRYTADILNNIGMAFEMISPLFSSQLFLPLSCIGLIAKSICGVAGGCTKASLTQHFAKRDNLADVSAKDGSQETAVNLVGMLLSVIV 236          
BLAST of EY649681 vs. ExPASy Swiss-Prot
Match: CP058_MOUSE (UPF0420 protein C16orf58 homolog OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.616e-14
Identity = 45/181 (24.86%), Postives = 79/181 (43.65%), Query Frame = 1
Query:  208 VKDFLLPAGFPGSVSDDYLGYMLLQFPTNVTGWICHAIVTSSLLKAVGIDSFSGTTXXXXXXXIKWVSKDGIGAVGRLFIGGRFGNLFDDDPKQWRMYADFIGSAGSIFDLATQVYPAYFLPLASLGNLSKAVARGLKDPSFRVIQNHFAISGNLXXXXXXXXXXXXXXPVFGLALGILIL 750
            ++  LLP GFP SVS DYL Y L          +  ++ T ++L+ +G+ +   +          W+ KD  G +GR+ +    G+  D + KQWR++AD +       ++   +YP +F    S  NL+K +       +   +  H A   N+               + GL + +L+L
Sbjct:   71 LRSVLLPQGFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLQGLGVGNAKASVSAATST---WLVKDSTGMLGRIILAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPMYPIFFTMTVSTSNLAKCIVGVAGGATRAALTMHQARRNNMADVSAKDSSQETVVNLAGLLVSLLML 248          
BLAST of EY649681 vs. ExPASy Swiss-Prot
Match: CP058_RAT (UPF0420 protein C16orf58 homolog OS=Rattus norvegicus PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.256e-13
Identity = 50/190 (26.32%), Postives = 82/190 (43.16%), Query Frame = 1
Query:  181 TNLSWLPNVVKDFLLPAGFPGSVSDDYLGYMLLQFPTNVTGWICHAIVTSSLLKAVGIDSFSGTTXXXXXXXIKWVSKDGIGAVGRLFIGGRFGNLFDDDPKQWRMYADFIGSAGSIFDLATQVYPAYFLPLASLGNLSKAVARGLKDPSFRVIQNHFAISGNLXXXXXXXXXXXXXXPVFGLALGILIL 750
            T LS L +V    LLP GFP SVS DYL Y L          +  ++ T ++L+ +G+ +   +          W+ KD  G +GR+      G+  D + KQWR++AD +       ++   +YP +F    S  NL+K +       +   +  H A   N+               + GL + +L+L
Sbjct:   66 TTLSGLRSV----LLPQGFPDSVSPDYLQYQLWDSVQAFASSLSGSLATQAVLQGLGVGNAKASVSAATST---WLVKDSTGMLGRIIFAWWKGSKLDCNAKQWRLFADILNDTAMFLEIMAPMYPIFFTMTVSTSNLAKCIVGVAGGATRAALTMHQARRNNMADVSAKDSSQETVVNLAGLLVSLLML 248          
BLAST of EY649681 vs. ExPASy Swiss-Prot
Match: CP058_PONAB (UPF0420 protein C16orf58 homolog OS=Pongo abelii PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.773e-13
Identity = 46/176 (26.14%), Postives = 73/176 (41.48%), Query Frame = 1
Query:  223 LPAGFPGSVSDDYLGYMLLQFPTNVTGWICHAIVTSSLLKAVGIDSFSGTTXXXXXXXIKWVSKDGIGAVGRLFIGGRFGNLFDDDPKQWRMYADFIGSAGSIFDLATQVYPAYFLPLASLGNLSKAVARGLKDPSFRVIQNHFAISGNLXXXXXXXXXXXXXXPVFGLALGILIL 750
            LP GFP SVS DYL Y L          +  ++ T ++L  +G+ +   T          W+ KD  G +GR+      G+  D + KQWR++AD +       ++   VYP  F    S  NL+K +       +   +  H A   N+               + GL + +L+L
Sbjct:   78 LPQGFPDSVSPDYLPYQLWDSVQAFASGLSGSLATQAVLLGIGVGNAKATVSAATAT---WLVKDSTGMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPVYPICFTMTVSTSNLAKCIVSVAGGATRAALTVHQARRNNMADVSAKDSSQETLVNLVGLLVSLLML 250          
BLAST of EY649681 vs. ExPASy Swiss-Prot
Match: CP058_HUMAN (UPF0420 protein C16orf58 OS=Homo sapiens GN=C16orf58 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.141e-13
Identity = 46/176 (26.14%), Postives = 73/176 (41.48%), Query Frame = 1
Query:  223 LPAGFPGSVSDDYLGYMLLQFPTNVTGWICHAIVTSSLLKAVGIDSFSGTTXXXXXXXIKWVSKDGIGAVGRLFIGGRFGNLFDDDPKQWRMYADFIGSAGSIFDLATQVYPAYFLPLASLGNLSKAVARGLKDPSFRVIQNHFAISGNLXXXXXXXXXXXXXXPVFGLALGILIL 750
            LP GFP SVS DYL Y L          +  ++ T ++L  +G+ +   T          W+ KD  G +GR+      G+  D + KQWR++AD +       ++   VYP  F    S  NL+K +       +   +  H A   N+               + GL + +L+L
Sbjct:   78 LPQGFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLLGIGVGNAKATVSAATAT---WLVKDSTGMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPVYPICFTMTVSTSNLAKCIVSVAGGATRAALTVHQARRNNMADVSAKDSSQETLVNLAGLLVSLLML 250          
The following BLAST results are available for this feature:
BLAST of EY649681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
U420_DICDI1.753e-1526.37UPF0420 protein OS=Dictyostelium discoideum GN=DDB... [more]
CP058_MOUSE9.616e-1424.86UPF0420 protein C16orf58 homolog OS=Mus musculus P... [more]
CP058_RAT1.256e-1326.32UPF0420 protein C16orf58 homolog OS=Rattus norvegi... [more]
CP058_PONAB4.773e-1326.14UPF0420 protein C16orf58 homolog OS=Pongo abelii P... [more]
CP058_HUMAN8.141e-1326.14UPF0420 protein C16orf58 OS=Homo sapiens GN=C16orf... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-C11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649681 ID=EY649681; Name=EY649681; organism=Citrus sinensis; type=EST; length=910bp
CGGACGCGTGGGGCCGGCAACGGAAGAGCTCAAAGCCAGCAGCACGTGGT
TTTGGTGGAGAGATATGGCAATGGCACTGCTAGGAGGTTCATATTAGATG
ATGAGTGGCAAGTACAAACTTTTGATGCCGACCATGATCCCACAAAAGAT
ACTAGGTTACAAGGGTCACAATTTTCTGACACAAATTTATCGTGGCTCCC
CAATGTTGTCAAGGATTTCCTTTTACCTGCAGGCTTCCCAGGATCGGTTT
CAGATGATTATTTGGGGTACATGTTGCTACAATTCCCTACAAATGTTACT
GGATGGATCTGTCACGCAATAGTCACATCAAGTCTCCTAAAGGCTGTGGG
TATTGATTCTTTCTCTGGCACAACTGCAGCTGCTTCTGCTGCTGCCATCA
AATGGGTATCAAAGGATGGCATTGGAGCTGTTGGCCGCTTATTCATTGGT
GGGCGCTTTGGGAATCTTTTTGATGATGATCCAAAACAGTGGCGCATGTA
TGCAGACTTCATTGGCAGCGCTGGAAGCATCTTTGATCTTGCTACCCAAG
TATATCCTGCCTATTTTCTGCCATTAGCATCTCTTGGGAATCTTTCCAAG
GCTGTGGCAAGAGGACTAAAAGATCCTTCATTCCGCGTGATACAAAACCA
TTTTGCAATCTCAGGAAATCTANGAGAGGTAGCAGCAAAGGAGGAAGTTT
GGGAAGTATCTGCCCCAGTGTTTGGTCTGGCATTGGGCATATTGATCCTG
AATCATCAATGCAGGATACACCTGGCCTTGTAAGATATACCCAGTCTTGT
CATTGACATGGNTAAGCATNCGGCTTGTGCCCTTTGGGTTACGTATCAGT
CGCTTTCGGTCTACATTTACACATAAATCTCAACGTGCTCGATACTGGTA
AATCACTGTT
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