EY649661

Overview
NameEY649661
Unique NameEY649661
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649661 vs. ExPASy Swiss-Prot
Match: CCD11_ARATH (Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3)

HSP 1 Score: 263.077 bits (671), Expect = 1.641e-69
Identity = 129/191 (67.54%), Postives = 152/191 (79.58%), Query Frame = 1
Query:  235 QVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWMLRSVTPFSFIYFFACKLDPTGTFMGFLISKATKIILSNIQDASFFRYRPXXXXXXXXLCAXNEIPNLSLGKS*H--AESWCDGLSKEKIISCYRLMXRLVL 801
            +VQAYYNF PLT+YL+VNYMDRFLY+RRLP+ +GWP QLL+VACLSLAAKMEE +VPSL D QV G KY+FE KTI+RMELLVLSVLDW LRSVTPF FI FFA K+DP+GTF+GF IS AT+IILSNI++ASF  Y P        LC  NE+P+LS   + H   E+WCDGLSKEKI+ CYRLM  + +
Sbjct:   91 KVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFDFISFFAYKIDPSGTFLGFFISHATEIILSNIKEASFLEYWPSSIAAAAILCVANELPSLSSVVNPHESPETWCDGLSKEKIVRCYRLMKAMAI 281          
BLAST of EY649661 vs. ExPASy Swiss-Prot
Match: CCD12_ORYSJ (Cyclin-D1-2 OS=Oryza sativa subsp. japonica GN=CYCD1-2 PE=3 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 3.934e-47
Identity = 102/189 (53.97%), Postives = 128/189 (67.72%), Query Frame = 1
Query:  235 QVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWMLRSVTPFSFIYFFACKLDPTGTFMGFLISKATKIILSNIQDASFFRYRPXXXXXXXXLCAXNEIPNLSLGKS*HAESW-CDGLSKEKIISCYRLMXRLV 798
            +V+  Y  LP+T+YL+V+YMDRFL   RLP  NGW  QLL+V CLSLAAKMEET+VPS+LDLQ+E A+YIFE +TI RMELLVL  LDW LRS+TPF+F+Y FA K+DP G  +  LI +AT++ L+ I D  F  + P        LCA +EI  L         SW   GL +E II CYRLM +L+
Sbjct:  125 KVRELYGMLPVTAYLAVSYMDRFLSLHRLP-GNGWAMQLLAVTCLSLAAKMEETLVPSILDLQMEDARYIFEHRTIFRMELLVLDALDWRLRSITPFTFMYLFADKVDPNGKHIRELIHQATQVTLATIHDTEFLDHCPSSIAAAAVLCASSEIMQLVSIDHGTLVSWRIIGLDEEAIIRCYRLMQQLI 312          
BLAST of EY649661 vs. ExPASy Swiss-Prot
Match: CCD21_ORYSJ (Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYCD2-1 PE=3 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 2.550e-46
Identity = 101/189 (53.44%), Postives = 127/189 (67.20%), Query Frame = 1
Query:  235 QVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWMLRSVTPFSFIYFFACKLDPTGTFMGFLISKATKIILSNIQDASFFRYRPXXXXXXXXLCAXNEIPNLSLGKS*HAESWCDGLSKEKIISCYRLMXRLVL 801
            +VQ Y  FLPLT+YL+VNYMDRFL  R LP+  GW  QLL+VACLSLAAKMEET+VPSLLDLQVE ++Y+FE +TI RME L+L+ L+W LRSVTPF+FI FFACK           IS A  ++ +   D  F  + P        LCA  E P+L+      A +WC GL++E I SCY+LM +LV+
Sbjct:   91 KVQEYNGFLPLTAYLAVNYMDRFLSLRHLPEGQGWAMQLLAVACLSLAAKMEETLVPSLLDLQVECSRYVFEPRTICRMEFLILTALNWRLRSVTPFTFIDFFACK----------HISNA--MVQNANSDIQFLDHCPSSMAAAAVLCATGETPSLAFVNPELAVNWCIGLAEEGISSCYQLMQQLVI 267          
BLAST of EY649661 vs. ExPASy Swiss-Prot
Match: CCD11_ORYSJ (Cyclin-D1-1 OS=Oryza sativa subsp. japonica GN=CYCD1-1 PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.071e-44
Identity = 98/190 (51.58%), Postives = 128/190 (67.37%), Query Frame = 1
Query:  235 QVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWMLRSVTPFSFIYFFACKLDPTGTFMGFLISKATKIILSNIQDASFFRYRPXXXXXXXXLCAXNEIP----NLSLGKS*HAESWCDGLSKEKIISCYRLMXR 792
            +V++ + F P T+YL+V+YMDRF+ SR LPD+ GW  QLL VACLSLAAKMEE+  P LLDLQ+EG ++IFE +TI+RMEL+VL  LDW LRSVTPF+F+ FFACK+  +G     L  +A +IILS I +  F  +          L A NE P    + S   S  A SWC GL++E+I SCY+L+ R
Sbjct:  134 KVRSVHGFQPATAYLAVSYMDRFMSSRSLPDH-GWASQLLCVACLSLAAKMEESSAPPLLDLQIEGTRFIFEPRTIQRMELIVLVELDWRLRSVTPFAFVDFFACKVGSSGRSSRILALRACQIILSAIHELEFLNHCASSMAAAAVLFAVNESPAAMSHRSSVSSESAASWCIGLTEERISSCYQLLQR 322          
BLAST of EY649661 vs. ExPASy Swiss-Prot
Match: CCD22_ORYSJ (Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.988e-34
Identity = 86/207 (41.55%), Postives = 120/207 (57.97%), Query Frame = 1
Query:  214 LECLFNR-------QVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWMLRSVTPFSFIYFFACKLDPTGTFMGFLISKATKIILSNIQDASFFRYRPXXXXXXXXLCAXNE----IPNLSLGKS*HAESWCDGLSKEKIISCYRLMXRLVL 801
            LEC + +       +V +YYNF PL+ YL+VNY+DRFL S  LP +  W  QLLSV+CLSLA KMEETVVP  +DLQV  A+Y+FE + I+RMEL+V+  L W L++VTPFSFI +F  K +        L S  + + +  ++D+ F  +RP        L    E    + N +LG+S         ++KE ++ CY LM    L
Sbjct:   90 LECSWRKDAIDWICKVHSYYNFGPLSLYLAVNYLDRFLSSFNLPHDESWMQQLLSVSCLSLATKMEETVVPLPMDLQVFDAEYVFEARHIKRMELIVMKTLKWRLQAVTPFSFIGYFLDKFNEGKPPSYTLASWCSDLTVGTLKDSRFLSFRPSEIAAAVVLAVLAENQFLVFNSALGESEIP------VNKEMVMRCYELMVEKAL 290          
BLAST of EY649661 vs. ExPASy Swiss-Prot
Match: CCD23_ORYSJ (Putative cyclin-D2-3 OS=Oryza sativa subsp. japonica GN=CYCD2-3 PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.223e-33
Identity = 73/141 (51.77%), Postives = 97/141 (68.79%), Query Frame = 1
Query:  235 QVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPW--QLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWMLRSVTPFSFIYFFACKLDPTGTFMGFLISKATKIILSNIQDASFFRYRP 651
            +VQAYY+F PL +YL+VNY+DRFL S      N  PW  QLL VACLSLAAKMEET  P  LDLQV   +Y+F+ +TI RME++VL+ L W +++VTPF++I  F  K++        LIS+ T+IILS ++   F R+RP
Sbjct:  113 KVQAYYSFGPLCAYLAVNYLDRFLSSVEFSVTNDMPWMQQLLIVACLSLAAKMEETAAPGTLDLQVCNPEYVFDAETIHRMEIIVLTTLKWRMQAVTPFTYIGHFLDKINEGNRITSELISRCTEIILSTMKATVFLRFRP 253          
BLAST of EY649661 vs. ExPASy Swiss-Prot
Match: CCD42_ORYSJ (Cyclin-D4-2 OS=Oryza sativa subsp. japonica GN=CYCD4-2 PE=2 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 6.098e-32
Identity = 68/139 (48.92%), Postives = 95/139 (68.35%), Query Frame = 1
Query:  235 QVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWMLRSVTPFSFIYFFACKLDPTGTFMGFLISKATKIILSNIQDASFFRYRP 651
            +V  YYNF  +T+YL+VNY+DRFL    LP+   W  QLLSVACLS+AAKMEETVVP  LDLQ+   +++FE +TI RMELLVL+ L+W +++VTPFS+I +F  KL+         + +++++IL       F  +RP
Sbjct:  119 EVYTYYNFSSVTAYLAVNYLDRFLSQYELPEGRDWMTQLLSVACLSIAAKMEETVVPQCLDLQIGEPRFLFEVETIHRMELLVLTNLNWRMQAVTPFSYIDYFLRKLNSGNAAPRSWLLRSSELILRIAAGTGFLEFRP 257          
BLAST of EY649661 vs. ExPASy Swiss-Prot
Match: CCD41_ORYSJ (Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 6.742e-31
Identity = 70/139 (50.36%), Postives = 95/139 (68.35%), Query Frame = 1
Query:  235 QVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWMLRSVTPFSFIYFFACKLDPTGTFMGFLISKATKIILSNIQDASFFRYRP 651
            +V +YY+F PLT+ L+VNY+DRFL   +LPD   W  QLL+VACLSLAAKMEET VP  LDLQV   +Y+FE KTI+RMELLVLS L W +++VTPFS++ +F  +L+      G     ++++IL   +      +RP
Sbjct:  112 KVHSYYSFAPLTACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEETDVPQSLDLQVGEERYVFEAKTIQRMELLVLSTLKWRMQAVTPFSYVDYFLRELNGGDPPSGRSALLSSELILCIARGTECLGFRP 250          
BLAST of EY649661 vs. ExPASy Swiss-Prot
Match: CCD31_ORYSJ (Cyclin-D3-1 OS=Oryza sativa subsp. japonica GN=CYCD3-1 PE=2 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 2.562e-30
Identity = 79/184 (42.93%), Postives = 106/184 (57.61%), Query Frame = 1
Query:  235 QVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWMLRSVTPFSFIYFFACKLDPTGTFMGFLISKATKIILSNIQDASFFRYRPXXXXXXXXLCAXNEIPNLSLGKS*HAESWCDGLSKEKIISCYRLM 786
            +V   Y F PLT+ LSVNY+DRFL    LP       QLL+VA LSLAAKMEETVVP  LDLQV  AKY+FET+TI+RMEL VL+ L W +++VT  SFI ++  K +   T     +S++  +ILS  + A F  +RP        L A  E       +     +    L KE+++ CY ++
Sbjct:   99 KVHELYKFGPLTAVLSVNYLDRFLSVFDLPQEEACMTQLLAVASLSLAAKMEETVVPHPLDLQVCDAKYVFETRTIKRMELAVLNALKWRMQAVTACSFIDYYLHKFNDDDTPSTSALSRSVDLILSTCKVAEFLVFRPSEIAASVALVALEEHETSMFER---VATCYKNLKKERVLRCYEMI 279          
BLAST of EY649661 vs. ExPASy Swiss-Prot
Match: CCD21_ARATH (Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3)

HSP 1 Score: 132.494 bits (332), Expect = 3.346e-30
Identity = 69/139 (49.64%), Postives = 99/139 (71.22%), Query Frame = 1
Query:  235 QVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWMLRSVTPFSFIYFFACKLDPTGTFMGFLISKATKIILSNIQDASFFRYRP 651
            +V A+Y+F  L   LS+NY+DRFL S  LP +  W  QLL+V+CLSLA+KMEET VP ++DLQVE  K++FE KTI+RMELLV++ L+W L+++TPFSFI +F  K+  +G     LI ++++ IL+  +   F  +RP
Sbjct:  106 KVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKI--SGHVSENLIYRSSRFILNTTKAIEFLDFRP 242          
The following BLAST results are available for this feature:
BLAST of EY649661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
CCD11_ARATH1.641e-6967.54Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=... [more]
CCD12_ORYSJ3.934e-4753.97Cyclin-D1-2 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCD21_ORYSJ2.550e-4653.44Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCD11_ORYSJ1.071e-4451.58Cyclin-D1-1 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCD22_ORYSJ4.988e-3441.55Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCD23_ORYSJ4.223e-3351.77Putative cyclin-D2-3 OS=Oryza sativa subsp. japoni... [more]
CCD42_ORYSJ6.098e-3248.92Cyclin-D4-2 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCD41_ORYSJ6.742e-3150.36Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCD31_ORYSJ2.562e-3042.93Cyclin-D3-1 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCD21_ARATH3.346e-3049.64Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-B01-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649661 ID=EY649661; Name=EY649661; organism=Citrus sinensis; type=EST; length=925bp
AGCCATCAGCTAAGTACATGATGATCATAAAGGGTAACTGTCAATCAATC
TGAGCCGTAGATCTGAGTTAAAAGTTTTGTAAAATCAGATTGACCAGCCG
TTGGATTAATGGAGATATCAATGATCAATCCTCCAATATCTAATCTTTCT
CAGTACTATAAATACCATTTTGATATTACGTGGCAGTGATTGATATTAAA
AAGTTTTCACGTACTTGAGTGTCTTTTTAATCGACAGGTGCAAGCATACT
ATAATTTCCTCCCACTGACGTCGTATCTCTCCGTCAACTACATGGATCGG
TTTCTGTACTCTCGTCGGTTGCCGGATAACAATGGGTGGCCATGGCAACT
CTTATCTGTTGCTTGCTTATCATTAGCGGCTAAGATGGAGGAAACTGTGG
TTCCTTCTCTGTTGGATCTTCAGGTTGAAGGTGCAAAATATATTTTTGAA
ACAAAAACAATCCGTCGCATGGAGCTTCTTGTGCTGAGTGTCTTGGATTG
GATGCTGAGATCGGTAACACCATTCAGCTTCATTTATTTTTTCGCATGCA
AGCTCGATCCAACAGGAACTTTTATGGGGTTTCTGATTTCAAAGGCCACA
AAAATCATTTTATCCAATATCCAAGATGCTAGCTTTTTTAGATATAGGCC
GTCAAGCATTGCTGCTGCAGCGATTCTTTGTGCGGNCAATGAAATTCCAA
ATTTGTCTCTTGGTAAATCCTGACATGCTGAATCATGGTGTGATGGGCTG
AGTAAAGAGAAAATCATTAGCTGCTACCGGTTAATGCNACGACTCGTGCT
TTAATGATAGCCGAGAATACACCCAATAGTATCCCCCACCTCCGATTACG
ATTCGGCCAGAATGAGGCCTCCTGGGACTGGNATCANATCATCATCTTCT
CATCCCCACTGATAAAGGGAAAAAT
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