EY649650
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649650 vs. ExPASy Swiss-Prot
Match: CLCD_ARATH (Chloride channel protein CLC-d OS=Arabidopsis thaliana GN=CLC-D PE=1 SV=2) HSP 1 Score: 300.056 bits (767), Expect = 1.237e-80 Identity = 155/221 (70.14%), Postives = 174/221 (78.73%), Query Frame = 3 Query: 12 GDAFSEGLYEEQAHLRGVPLLESRPKYKMRQMTAKEACGAQKVVSLPRIIKVADVVSILRTNKHNGFPVIDHSRNGERLVIGXXXXXXXXXXXQSKVDFQHSPLPCDTRGGSKPISHSFSEFVKPASSKGXXXXXXXXXXXXMEMYIDLGPFLNPSPYVVPEDMSLSKVYNLFRQLGLRHIFVVPRASRVIGLITXKDLLIEDGEDSTTVEL-QSTSVRAQ 671 GDAF+EGLYE QA L+G+PLLESRPKY MRQM AKEAC +QKV+SLPR+I+VADV SIL +NKHNGFPVIDH+R+GE LVIG QSKVDFQHSPLPCD ++ I HSFSEF KP SSKG +EMYIDL PFLNPSPYVVPEDMSL+KVYNLFRQLGLRH+FVVPR SRVIGLIT KDLLIE+ +S+ VEL QSTSVR + Sbjct: 554 GDAFNEGLYEVQARLKGIPLLESRPKYHMRQMIAKEACQSQKVISLPRVIRVADVASILGSNKHNGFPVIDHTRSGETLVIGLVLRSHLLVLLQSKVDFQHSPLPCDP--SARNIRHSFSEFAKPVSSKGLCIEDIHLTSDDLEMYIDLAPFLNPSPYVVPEDMSLTKVYNLFRQLGLRHLFVVPRPSRVIGLITRKDLLIEENGESSAVELQQSTSVRGR 772
BLAST of EY649650 vs. ExPASy Swiss-Prot
Match: CLCG_ARATH (Putative chloride channel-like protein CLC-g OS=Arabidopsis thaliana GN=At5g33280 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.219e-21 Identity = 67/204 (32.84%), Postives = 95/204 (46.57%), Query Frame = 3 Query: 15 DAFSEGLYEEQAHLRGVPLLESRPKYKMRQMTAKEACGAQKVVSLPRIIKVADVVSILRTNKHNGFPVIDHSRNGERLVIGXXXXXXXXXXXQSKVDFQHSPLPCDTRGGSKPISHSFSEFVKPASSKGXXXXXXXXXXXXMEMYIDLGPFLNPSPYVVPEDMSLSKVYNLFRQLGLRHIFVVPRASR---VIGLITXKDLLIE 617 D F+ +Y L+G P L S + MRQ+ + V I KV +V +L+T HNGFPV+D V+ K F SP+ CD+ S+ EF K S + + MY+DL PF N SPY V E MSL+K LFR++G+RH+ V+P+ S V+G++T D + E Sbjct: 539 DGFNANIYNLIMKLKGFPYLYSHAEPYMRQLLVGDVVTGPLQV-FNGIEKVETIVHVLKTTNHNGFPVVDGPPLAAAPVLHGLILRAHILTLLKKRVFMPSPVACDSNTLSQ---FKAEEFAKKGSGRSDKIEDVELSEEELNMYLDLHPFSNASPYTVVETMSLAKALILFREVGIRHLLVIPKTSNRPPVVGILTRHDFMPE 738
BLAST of EY649650 vs. ExPASy Swiss-Prot
Match: CLCN7_HUMAN (H(+)/Cl(-) exchange transporter 7 OS=Homo sapiens GN=CLCN7 PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 2.077e-19 Identity = 69/203 (33.99%), Postives = 97/203 (47.78%), Query Frame = 3 Query: 12 GDAFSEGLYEEQAHLRGVPLLESRPKYKMRQMTAKEACGAQKVVSLPRIIKVADVVSILR--TNKHNGFPVIDHSRNGERLVI-GXXXXXXXXXXXQSKVDFQHSPLPC-DTRGGSKPISHSFSEFVKPASSKGXXXXXXXXXXXXMEMYIDLGPFLNPSPYVVPEDMSLSKVYNLFRQLGLRHIFVVPRASRVIGLITXKDL 608 GD F EGLY+ L+ VP L +TA+E V L R KV +V +L + HNGFPV++H+ + + + G + KV + S L R K ++ F P S E +DL F+NPSPY VP++ SL +V+ LFR LGLRH+ VV ++V+GL+T KDL Sbjct: 594 GDVFIEGLYDMHIQLQSVPFLHWEAPVTSHSLTAREVMSTP-VTCLRRREKVGVIVDVLSDTASNHNGFPVVEHADDTQPARLQGLILRSQLIVLLKHKVFVERSNLGLVQRRLRLKDFRDAYPRF-PPIQS-------IHVSQDERECTMDLSEFMNPSPYTVPQEASLPRVFKLFRALGLRHLVVVDNRNQVVGLVTRKDL 787
BLAST of EY649650 vs. ExPASy Swiss-Prot
Match: CLCN7_BOVIN (H(+)/Cl(-) exchange transporter 7 OS=Bos taurus GN=CLCN7 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.918e-18 Identity = 67/203 (33.00%), Postives = 96/203 (47.29%), Query Frame = 3 Query: 12 GDAFSEGLYEEQAHLRGVPLLESRPKYKMRQMTAKEACGAQKVVSLPRIIKVADVVSILRT--NKHNGFPVIDHSRNGERLVI-GXXXXXXXXXXXQSKVDFQHSPLPCDTRG-GSKPISHSFSEFVKPASSKGXXXXXXXXXXXXMEMYIDLGPFLNPSPYVVPEDMSLSKVYNLFRQLGLRHIFVVPRASRVIGLITXKDL 608 GD F EGLY+ L+ VP L +TA+E V L R KV +V +L + + HNGFPV++ + + + G + KV + S + R K ++ F P S E +DL F+NPSPY VP++ SL +V+ LFR LGLRH+ VV ++V+GL+T KDL Sbjct: 598 GDVFIEGLYDMHIQLQSVPFLHWEAPVTSHSLTAREVMSTP-VTCLRRREKVGVIVDVLSSTASNHNGFPVVEDADGTQPARLQGLILRSQLIVLLKHKVFVERSSMGLLRRRLRLKDFRDAYPRF-PPIQS-------IHVSQDERECTMDLSEFMNPSPYTVPQEASLPRVFKLFRALGLRHLVVVDNCNQVVGLVTRKDL 791
BLAST of EY649650 vs. ExPASy Swiss-Prot
Match: CLCN7_RAT (H(+)/Cl(-) exchange transporter 7 OS=Rattus norvegicus GN=Clcn7 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.140e-17 Identity = 67/203 (33.00%), Postives = 95/203 (46.80%), Query Frame = 3 Query: 12 GDAFSEGLYEEQAHLRGVPLLESRPKYKMRQMTAKEACGAQKVVSLPRIIKVADVVSILR--TNKHNGFPVIDHSRNGERLVI-GXXXXXXXXXXXQSKVDFQHSPLPC-DTRGGSKPISHSFSEFVKPASSKGXXXXXXXXXXXXMEMYIDLGPFLNPSPYVVPEDMSLSKVYNLFRQLGLRHIFVVPRASRVIGLITXKDL 608 GD F EGLY+ L+ VP L +TA+E V L R KV +V +L + HNGFPV++ + + + G + KV + S + R K ++ F P S E +DL F+NPSPY VP++ SL +V+ LFR LGLRH+ VV ++V+GL+T KDL Sbjct: 592 GDVFIEGLYDMHIQLQSVPFLHWEAPVTSHSLTAREVMSTP-VTCLRRREKVGIIVDVLSDTASNHNGFPVVEDVGDTQPARLQGLILRSQLIVLLKHKVFVERSNMGLVQRRLRLKDFRDAYPRF-PPIQS-------IHVSQDERECTMDLSEFMNPSPYTVPQEASLPRVFKLFRALGLRHLVVVDNHNQVVGLVTRKDL 785
BLAST of EY649650 vs. ExPASy Swiss-Prot
Match: CLCN7_MOUSE (H(+)/Cl(-) exchange transporter 7 OS=Mus musculus GN=Clcn7 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.140e-17 Identity = 67/203 (33.00%), Postives = 95/203 (46.80%), Query Frame = 3 Query: 12 GDAFSEGLYEEQAHLRGVPLLESRPKYKMRQMTAKEACGAQKVVSLPRIIKVADVVSILR--TNKHNGFPVIDHSRNGERLVI-GXXXXXXXXXXXQSKVDFQHSPLPC-DTRGGSKPISHSFSEFVKPASSKGXXXXXXXXXXXXMEMYIDLGPFLNPSPYVVPEDMSLSKVYNLFRQLGLRHIFVVPRASRVIGLITXKDL 608 GD F EGLY+ L+ VP L +TA+E V L R KV +V +L + HNGFPV++ + + + G + KV + S + R K ++ F P S E +DL F+NPSPY VP++ SL +V+ LFR LGLRH+ VV ++V+GL+T KDL Sbjct: 592 GDVFIEGLYDMHIQLQSVPFLHWEAPVTSHSLTAREVMSTP-VTCLRRREKVGIIVDVLSDTASNHNGFPVVEDVGDTQPARLQGLILRSQLIVLLKHKVFVERSNMGLVQRRLRLKDFRDAYPRF-PPIQS-------IHVSQDERECTMDLSEFMNPSPYTVPQEASLPRVFKLFRALGLRHLVVVDNHNQVVGLVTRKDL 785
BLAST of EY649650 vs. ExPASy Swiss-Prot
Match: CLCC_DICDI (Chloride channel protein C OS=Dictyostelium discoideum GN=clcC PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.150e-16 Identity = 56/204 (27.45%), Postives = 94/204 (46.08%), Query Frame = 3 Query: 12 GDAFSEGLYEEQAHLRGVPLLESRPKYKMRQMTAKEACGAQKVVSLPRIIKVADVVSILRTNKHNGFPVIDHSR-NGERLVIGXXXXXXXXXXXQSKVDFQHSPLPCDTRGGSKPI----SHSFSEFVKPASSKGXXXXXXXXXXXXMEMYIDLGPFLNPSPYVVPEDMSLSKVYNLFRQLGLRHIFVVPRASRVIGLITXKDL 608 GD F+E +YE + +P L+S+P + + + ++ VV LP + +V +V+IL +N HN FPVI+ + +RL G +V + RG + I + F +F S ++ +IDL P++N S + S + Y LFR +GLRH+ V+ + V+G++T DL Sbjct: 563 GDFFNESVYEHLMEQKSIPFLQSKPPHSTNNIRISDVM-SKNVVVLPEVCQVRLLVNILNSNNHNAFPVINSGPYDNQRLYRGIILRDHILVLLFYRVFY---------RGTGEEIYLDENFDFDKFTTETSKSPPPLSEMNFDQFELDSFIDLRPYMNSSGVTIHNTFSFVEAYKLFRNMGLRHLPVIDINNEVVGMVTRNDL 756 The following BLAST results are available for this feature:
BLAST of EY649650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY649650 ID=EY649650; Name=EY649650; organism=Citrus sinensis; type=EST; length=938bpback to top |