EY649650

Overview
NameEY649650
Unique NameEY649650
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length938
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649650 vs. ExPASy Swiss-Prot
Match: CLCD_ARATH (Chloride channel protein CLC-d OS=Arabidopsis thaliana GN=CLC-D PE=1 SV=2)

HSP 1 Score: 300.056 bits (767), Expect = 1.237e-80
Identity = 155/221 (70.14%), Postives = 174/221 (78.73%), Query Frame = 3
Query:   12 GDAFSEGLYEEQAHLRGVPLLESRPKYKMRQMTAKEACGAQKVVSLPRIIKVADVVSILRTNKHNGFPVIDHSRNGERLVIGXXXXXXXXXXXQSKVDFQHSPLPCDTRGGSKPISHSFSEFVKPASSKGXXXXXXXXXXXXMEMYIDLGPFLNPSPYVVPEDMSLSKVYNLFRQLGLRHIFVVPRASRVIGLITXKDLLIEDGEDSTTVEL-QSTSVRAQ 671
            GDAF+EGLYE QA L+G+PLLESRPKY MRQM AKEAC +QKV+SLPR+I+VADV SIL +NKHNGFPVIDH+R+GE LVIG           QSKVDFQHSPLPCD    ++ I HSFSEF KP SSKG            +EMYIDL PFLNPSPYVVPEDMSL+KVYNLFRQLGLRH+FVVPR SRVIGLIT KDLLIE+  +S+ VEL QSTSVR +
Sbjct:  554 GDAFNEGLYEVQARLKGIPLLESRPKYHMRQMIAKEACQSQKVISLPRVIRVADVASILGSNKHNGFPVIDHTRSGETLVIGLVLRSHLLVLLQSKVDFQHSPLPCDP--SARNIRHSFSEFAKPVSSKGLCIEDIHLTSDDLEMYIDLAPFLNPSPYVVPEDMSLTKVYNLFRQLGLRHLFVVPRPSRVIGLITRKDLLIEENGESSAVELQQSTSVRGR 772          
BLAST of EY649650 vs. ExPASy Swiss-Prot
Match: CLCG_ARATH (Putative chloride channel-like protein CLC-g OS=Arabidopsis thaliana GN=At5g33280 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.219e-21
Identity = 67/204 (32.84%), Postives = 95/204 (46.57%), Query Frame = 3
Query:   15 DAFSEGLYEEQAHLRGVPLLESRPKYKMRQMTAKEACGAQKVVSLPRIIKVADVVSILRTNKHNGFPVIDHSRNGERLVIGXXXXXXXXXXXQSKVDFQHSPLPCDTRGGSKPISHSFSEFVKPASSKGXXXXXXXXXXXXMEMYIDLGPFLNPSPYVVPEDMSLSKVYNLFRQLGLRHIFVVPRASR---VIGLITXKDLLIE 617
            D F+  +Y     L+G P L S  +  MRQ+   +       V    I KV  +V +L+T  HNGFPV+D        V+              K  F  SP+ CD+   S+       EF K  S +             + MY+DL PF N SPY V E MSL+K   LFR++G+RH+ V+P+ S    V+G++T  D + E
Sbjct:  539 DGFNANIYNLIMKLKGFPYLYSHAEPYMRQLLVGDVVTGPLQV-FNGIEKVETIVHVLKTTNHNGFPVVDGPPLAAAPVLHGLILRAHILTLLKKRVFMPSPVACDSNTLSQ---FKAEEFAKKGSGRSDKIEDVELSEEELNMYLDLHPFSNASPYTVVETMSLAKALILFREVGIRHLLVIPKTSNRPPVVGILTRHDFMPE 738          
BLAST of EY649650 vs. ExPASy Swiss-Prot
Match: CLCN7_HUMAN (H(+)/Cl(-) exchange transporter 7 OS=Homo sapiens GN=CLCN7 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 2.077e-19
Identity = 69/203 (33.99%), Postives = 97/203 (47.78%), Query Frame = 3
Query:   12 GDAFSEGLYEEQAHLRGVPLLESRPKYKMRQMTAKEACGAQKVVSLPRIIKVADVVSILR--TNKHNGFPVIDHSRNGERLVI-GXXXXXXXXXXXQSKVDFQHSPLPC-DTRGGSKPISHSFSEFVKPASSKGXXXXXXXXXXXXMEMYIDLGPFLNPSPYVVPEDMSLSKVYNLFRQLGLRHIFVVPRASRVIGLITXKDL 608
            GD F EGLY+    L+ VP L          +TA+E      V  L R  KV  +V +L    + HNGFPV++H+ + +   + G           + KV  + S L     R   K    ++  F  P  S               E  +DL  F+NPSPY VP++ SL +V+ LFR LGLRH+ VV   ++V+GL+T KDL
Sbjct:  594 GDVFIEGLYDMHIQLQSVPFLHWEAPVTSHSLTAREVMSTP-VTCLRRREKVGVIVDVLSDTASNHNGFPVVEHADDTQPARLQGLILRSQLIVLLKHKVFVERSNLGLVQRRLRLKDFRDAYPRF-PPIQS-------IHVSQDERECTMDLSEFMNPSPYTVPQEASLPRVFKLFRALGLRHLVVVDNRNQVVGLVTRKDL 787          
BLAST of EY649650 vs. ExPASy Swiss-Prot
Match: CLCN7_BOVIN (H(+)/Cl(-) exchange transporter 7 OS=Bos taurus GN=CLCN7 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.918e-18
Identity = 67/203 (33.00%), Postives = 96/203 (47.29%), Query Frame = 3
Query:   12 GDAFSEGLYEEQAHLRGVPLLESRPKYKMRQMTAKEACGAQKVVSLPRIIKVADVVSILRT--NKHNGFPVIDHSRNGERLVI-GXXXXXXXXXXXQSKVDFQHSPLPCDTRG-GSKPISHSFSEFVKPASSKGXXXXXXXXXXXXMEMYIDLGPFLNPSPYVVPEDMSLSKVYNLFRQLGLRHIFVVPRASRVIGLITXKDL 608
            GD F EGLY+    L+ VP L          +TA+E      V  L R  KV  +V +L +  + HNGFPV++ +   +   + G           + KV  + S +    R    K    ++  F  P  S               E  +DL  F+NPSPY VP++ SL +V+ LFR LGLRH+ VV   ++V+GL+T KDL
Sbjct:  598 GDVFIEGLYDMHIQLQSVPFLHWEAPVTSHSLTAREVMSTP-VTCLRRREKVGVIVDVLSSTASNHNGFPVVEDADGTQPARLQGLILRSQLIVLLKHKVFVERSSMGLLRRRLRLKDFRDAYPRF-PPIQS-------IHVSQDERECTMDLSEFMNPSPYTVPQEASLPRVFKLFRALGLRHLVVVDNCNQVVGLVTRKDL 791          
BLAST of EY649650 vs. ExPASy Swiss-Prot
Match: CLCN7_RAT (H(+)/Cl(-) exchange transporter 7 OS=Rattus norvegicus GN=Clcn7 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.140e-17
Identity = 67/203 (33.00%), Postives = 95/203 (46.80%), Query Frame = 3
Query:   12 GDAFSEGLYEEQAHLRGVPLLESRPKYKMRQMTAKEACGAQKVVSLPRIIKVADVVSILR--TNKHNGFPVIDHSRNGERLVI-GXXXXXXXXXXXQSKVDFQHSPLPC-DTRGGSKPISHSFSEFVKPASSKGXXXXXXXXXXXXMEMYIDLGPFLNPSPYVVPEDMSLSKVYNLFRQLGLRHIFVVPRASRVIGLITXKDL 608
            GD F EGLY+    L+ VP L          +TA+E      V  L R  KV  +V +L    + HNGFPV++   + +   + G           + KV  + S +     R   K    ++  F  P  S               E  +DL  F+NPSPY VP++ SL +V+ LFR LGLRH+ VV   ++V+GL+T KDL
Sbjct:  592 GDVFIEGLYDMHIQLQSVPFLHWEAPVTSHSLTAREVMSTP-VTCLRRREKVGIIVDVLSDTASNHNGFPVVEDVGDTQPARLQGLILRSQLIVLLKHKVFVERSNMGLVQRRLRLKDFRDAYPRF-PPIQS-------IHVSQDERECTMDLSEFMNPSPYTVPQEASLPRVFKLFRALGLRHLVVVDNHNQVVGLVTRKDL 785          
BLAST of EY649650 vs. ExPASy Swiss-Prot
Match: CLCN7_MOUSE (H(+)/Cl(-) exchange transporter 7 OS=Mus musculus GN=Clcn7 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.140e-17
Identity = 67/203 (33.00%), Postives = 95/203 (46.80%), Query Frame = 3
Query:   12 GDAFSEGLYEEQAHLRGVPLLESRPKYKMRQMTAKEACGAQKVVSLPRIIKVADVVSILR--TNKHNGFPVIDHSRNGERLVI-GXXXXXXXXXXXQSKVDFQHSPLPC-DTRGGSKPISHSFSEFVKPASSKGXXXXXXXXXXXXMEMYIDLGPFLNPSPYVVPEDMSLSKVYNLFRQLGLRHIFVVPRASRVIGLITXKDL 608
            GD F EGLY+    L+ VP L          +TA+E      V  L R  KV  +V +L    + HNGFPV++   + +   + G           + KV  + S +     R   K    ++  F  P  S               E  +DL  F+NPSPY VP++ SL +V+ LFR LGLRH+ VV   ++V+GL+T KDL
Sbjct:  592 GDVFIEGLYDMHIQLQSVPFLHWEAPVTSHSLTAREVMSTP-VTCLRRREKVGIIVDVLSDTASNHNGFPVVEDVGDTQPARLQGLILRSQLIVLLKHKVFVERSNMGLVQRRLRLKDFRDAYPRF-PPIQS-------IHVSQDERECTMDLSEFMNPSPYTVPQEASLPRVFKLFRALGLRHLVVVDNHNQVVGLVTRKDL 785          
BLAST of EY649650 vs. ExPASy Swiss-Prot
Match: CLCC_DICDI (Chloride channel protein C OS=Dictyostelium discoideum GN=clcC PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.150e-16
Identity = 56/204 (27.45%), Postives = 94/204 (46.08%), Query Frame = 3
Query:   12 GDAFSEGLYEEQAHLRGVPLLESRPKYKMRQMTAKEACGAQKVVSLPRIIKVADVVSILRTNKHNGFPVIDHSR-NGERLVIGXXXXXXXXXXXQSKVDFQHSPLPCDTRGGSKPI----SHSFSEFVKPASSKGXXXXXXXXXXXXMEMYIDLGPFLNPSPYVVPEDMSLSKVYNLFRQLGLRHIFVVPRASRVIGLITXKDL 608
            GD F+E +YE     + +P L+S+P +    +   +   ++ VV LP + +V  +V+IL +N HN FPVI+    + +RL  G             +V +         RG  + I    +  F +F    S               ++ +IDL P++N S   +    S  + Y LFR +GLRH+ V+   + V+G++T  DL
Sbjct:  563 GDFFNESVYEHLMEQKSIPFLQSKPPHSTNNIRISDVM-SKNVVVLPEVCQVRLLVNILNSNNHNAFPVINSGPYDNQRLYRGIILRDHILVLLFYRVFY---------RGTGEEIYLDENFDFDKFTTETSKSPPPLSEMNFDQFELDSFIDLRPYMNSSGVTIHNTFSFVEAYKLFRNMGLRHLPVIDINNEVVGMVTRNDL 756          
The following BLAST results are available for this feature:
BLAST of EY649650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
CLCD_ARATH1.237e-8070.14Chloride channel protein CLC-d OS=Arabidopsis thal... [more]
CLCG_ARATH2.219e-2132.84Putative chloride channel-like protein CLC-g OS=Ar... [more]
CLCN7_HUMAN2.077e-1933.99H(+)/Cl(-) exchange transporter 7 OS=Homo sapiens ... [more]
CLCN7_BOVIN3.918e-1833.00H(+)/Cl(-) exchange transporter 7 OS=Bos taurus GN... [more]
CLCN7_RAT1.140e-1733.00H(+)/Cl(-) exchange transporter 7 OS=Rattus norveg... [more]
CLCN7_MOUSE1.140e-1733.00H(+)/Cl(-) exchange transporter 7 OS=Mus musculus ... [more]
CLCC_DICDI2.150e-1627.45Chloride channel protein C OS=Dictyostelium discoi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-A01-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649650 ID=EY649650; Name=EY649650; organism=Citrus sinensis; type=EST; length=938bp
CCACGCGTCCGGGAGATGCTTTTAGTGAAGGTCTTTACGAAGAACAAGCA
CACCTGAGGGGTGTTCCTTTGTTGGAATCAAGACCTAAATACAAGATGCG
GCAAATGACTGCAAAAGAAGCATGTGGAGCTCAAAAGGTTGTTTCCTTAC
CTCGAATCATAAAGGTTGCTGATGTAGTTTCTATATTGCGGACAAACAAA
CACAATGGCTTCCCGGTGATTGATCACTCAAGAAACGGAGAAAGATTAGT
AATTGGACTTGTGCTTCGAAGCCACTTGCTGGTACTTCTTCAGTCAAAGG
TAGATTTCCAGCATAGTCCTTTGCCTTGTGATACCAGAGGTGGATCAAAG
CCAATCAGCCACAGTTTCAGTGAATTTGTAAAACCTGCTTCCAGTAAAGG
ATTATCTATTGATGACATACACTTAAGTTCAGATGACATGGAAATGTACA
TAGATCTTGGCCCATTTTTGAATCCCTCTCCTTATGTTGTTCCCGAAGAT
ATGTCTCTGTCGAAGGTATATAATCTTTTCCGCCAACTGGGACTGAGACA
TATATTTGTCGTCCCTCGTGCTTCTCGTGTGATTGGTTTGATTACCANAA
AAGATTTGTTGATTGAGGATGGTGAGGATTCAACCACAGTGGAGCTCCAA
TCAACTAGTGTAAGAGCTCAGCGTCGTGATAAAAGTTTGCTCACAGGAAT
ACAGAAGCGGAGCTTCCCTTTTGAATGGTCTTTGGGTTGGAGATCATAAC
TGATGTGTAAGATCTACACTGAAGACCAATTNCTTTGGCAGTCTGCTCCC
ACAATGTTTCTCCTCAAATAAATTTTTTGTTTTTCTATAGGAGGAATTGT
ATTATTGATACCGCCCCCGTACTACCGGGATGGCCACACCATGAAATATG
NACATAATCTATAGAAAATGAATTGTAGAATTATTTTT
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