EG358346

Overview
NameEG358346
Unique NameEG358346
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length470
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EG358346 vs. ExPASy Swiss-Prot
Match: CHSY_BETVE (Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 2.281e-26
Identity = 56/58 (96.55%), Postives = 58/58 (100.00%), Query Frame = -2 
Query:    2 VPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 175
            VP+LGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  102 VPKLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 159
[Close]
BLAST of EG358346 vs. ExPASy Swiss-Prot
Match: CHS3_CAMSI (Chalcone synthase 3 OS=Camellia sinensis GN=CHS3 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.281e-26
Identity = 56/58 (96.55%), Postives = 58/58 (100.00%), Query Frame = -2 
Query:    2 VPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 175
            VP+LGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  102 VPKLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 159
[Close]
BLAST of EG358346 vs. ExPASy Swiss-Prot
Match: CHS2_CAMSI (Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.281e-26
Identity = 56/58 (96.55%), Postives = 58/58 (100.00%), Query Frame = -2 
Query:    2 VPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 175
            VP+LGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  102 VPKLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 159
[Close]
BLAST of EG358346 vs. ExPASy Swiss-Prot
Match: CHS1_CAMSI (Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.281e-26
Identity = 56/58 (96.55%), Postives = 58/58 (100.00%), Query Frame = -2 
Query:    2 VPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 175
            VP+LGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  102 VPKLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 159
[Close]
BLAST of EG358346 vs. ExPASy Swiss-Prot
Match: CHSY_HYDMC (Chalcone synthase OS=Hydrangea macrophylla GN=CHS PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 6.637e-26
Identity = 54/58 (93.10%), Postives = 58/58 (100.00%), Query Frame = -2 
Query:    2 VPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 175
            +P+LGKEAAT+AIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  102 IPKLGKEAATRAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 159
[Close]
BLAST of EG358346 vs. ExPASy Swiss-Prot
Match: CHS7_PICMA (Chalcone synthase 7 OS=Picea mariana GN=CSF7 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 6.637e-26
Identity = 54/58 (93.10%), Postives = 58/58 (100.00%), Query Frame = -2 
Query:    2 VPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 175
            VPRLGKEAATKAIKEWGQPKSKITH++FCTTSGVDMPGADY+LTKLLGLRPSVKR+MM
Sbjct:  107 VPRLGKEAATKAIKEWGQPKSKITHVIFCTTSGVDMPGADYQLTKLLGLRPSVKRVMM 164
[Close]
BLAST of EG358346 vs. ExPASy Swiss-Prot
Match: CHSY_HYPAN (Chalcone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 8.668e-26
Identity = 55/58 (94.83%), Postives = 57/58 (98.28%), Query Frame = -2 
Query:    2 VPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 175
            VP+LGKEAA KAIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  102 VPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 159
[Close]
BLAST of EG358346 vs. ExPASy Swiss-Prot
Match: CHSY_CARAN (Chalcone synthase OS=Cardamine amara GN=CHS PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 8.668e-26
Identity = 55/58 (94.83%), Postives = 57/58 (98.28%), Query Frame = -2 
Query:    2 VPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 175
            VP+LGKEAA KAIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  107 VPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 164
[Close]
BLAST of EG358346 vs. ExPASy Swiss-Prot
Match: CHSY_CALCH (Chalcone synthase OS=Callistephus chinensis GN=CHS PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 8.668e-26
Identity = 54/58 (93.10%), Postives = 57/58 (98.28%), Query Frame = -2 
Query:    2 VPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 175
            VP+LGKEAATKAIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRPSVKR MM
Sbjct:  105 VPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMM 162
[Close]
BLAST of EG358346 vs. ExPASy Swiss-Prot
Match: CHS5_SOYBN (Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 8.668e-26
Identity = 55/61 (90.16%), Postives = 58/61 (95.08%), Query Frame = -2 
Query:    2 VRGVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 184
            V  VP+LGKEAATKAIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRPSVKR MM
Sbjct:   99 VMEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMM 159
The following BLAST results are available for this feature:
BLAST of EG358346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CHSY_BETVE2.281e-2696.55Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 ... [more]
CHS3_CAMSI2.281e-2696.55Chalcone synthase 3 OS=Camellia sinensis GN=CHS3 P... [more]
CHS2_CAMSI2.281e-2696.55Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 P... [more]
CHS1_CAMSI2.281e-2696.55Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 P... [more]
CHSY_HYDMC6.637e-2693.10Chalcone synthase OS=Hydrangea macrophylla GN=CHS ... [more]
CHS7_PICMA6.637e-2693.10Chalcone synthase 7 OS=Picea mariana GN=CSF7 PE=2 ... [more]
CHSY_HYPAN8.668e-2694.83Chalcone synthase OS=Hypericum androsaemum PE=1 SV... [more]
CHSY_CARAN8.668e-2694.83Chalcone synthase OS=Cardamine amara GN=CHS PE=3 S... [more]
CHSY_CALCH8.668e-2693.10Chalcone synthase OS=Callistephus chinensis GN=CHS... [more]
CHS5_SOYBN8.668e-2690.16Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV... [more]

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Properties
Property NameValue
Genbank description4a4 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0004a4, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358346 ID=EG358346; Name=EG358346; organism=Citrus sinensis; type=EST; length=470bp
ACATCATGAGACGTTTGACGGATGGGCGAAGGCCCAAGAGTTTTGTGAGC
CGGTAATCGGCCCCGGGCATGTCAACACCGCTAGTGGTGCAAAAGACCAA
GTGGGTGATTTTGGACTTGGGCTGGCCCCATTCTTTAATGGCCTTGGTGG
CTGCTTCTTTGCCGAGCCTCGGTACGCCTCTCACTCTTGTCTGAGTTTAT
ACAATTTAGTGATTTACTAATAAATAAATAAATAAATAAAAGGCAGAAAC
GAATAATTACAAGTAAAAATCAGAATTAGACACTCTGGTATTTAGCGCCG
TGGAGAAGCAAAGGTGTGCCAGCGAACAGCTGTTCTGTTGGGGTAACTGA
CTGATATATTCGTTATTGTGAACTAGACTTGATAAGGTAAGCTATGGCGA
ACATAGATATAGAGGGACTCTTGAGAGACGTGCCAAATGATAAGCGGTTG
CCGAAGACGAAGATTGTGTG
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