EY680494

Overview
NameEY680494
Unique NameEY680494
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680494 vs. ExPASy Swiss-Prot
Match: SUBL_ARATH (Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.082e-42
Identity = 100/251 (39.84%), Postives = 148/251 (58.96%), Query Frame = 3
Query:   12 APGVDILSAYP----PIG----SKDIQGYALLSGTSMSCPHVAGIAALIKSLHRDWSPAAIRSALVTTASQTGTDGMNIFEEGSTRKEADPFDIGGGHVNPNKAMNPGLVYDITVEDYIQFLCFMGHNDASISRLTKSKINC-LKNNHLALDLNLPSITIPNLHNNETVTVTRKVTNVGQINSAYEALVEAPYGVNMTVEPEVISFNMNIKILSFRVTFFSNHKVHPVPDAK*RFRSLTWTDGEHFGRNPI 737
            APGV+IL+A+     P G    S+ ++ + ++SGTSMSCPHV+G+AAL+KS+H +WSPAAIRSAL+TTA +T  DG  + +  +T K + PFD G GHV+P  A NPGL+YD+T EDY+ FLC + +    I  +++    C    ++   DLN PS  + N+        TR VT+VG   +    +     GV ++VEP V++F    +  S+ VTF  +      P     F S+ W+DG+H   +P+
Sbjct:  508 APGVNILAAWTGAAGPTGLASDSRRVE-FNIISGTSMSCPHVSGLAALLKSVHPEWSPAAIRSALMTTAYKTYKDGKPLLDI-ATGKPSTPFDHGAGHVSPTTATNPGLIYDLTTEDYLGFLCALNYTSPQIRSVSRRNYTCDPSKSYSVADLNYPSFAV-NVDGVGAYKYTRTVTSVGGAGTYSVKVTSETTGVKISVEPAVLNFKEANEKKSYTVTFTVDSS---KPSGSNSFGSIEWSDGKHVVGSPV 752          
BLAST of EY680494 vs. ExPASy Swiss-Prot
Match: CUCM1_CUCME (Cucumisin OS=Cucumis melo PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.021e-37
Identity = 99/249 (39.76%), Postives = 140/249 (56.22%), Query Frame = 3
Query:   15 PGVDILSAYPPI----GSKDIQGYALLSGTSMSCPHVAGIAALIKSLHRDWSPAAIRSALVTTASQTGTDGMNIFEEGSTRKEADPFDIGGGHVNPNKAMNPGLVYDITVEDYIQFLCFMGHNDASISRLTKSKINCLK-NNHLALDLNLPSITIPNLHNNETVT--VTRKVTNVGQINSAYEALVEAPYGVNMTVEPEVISFNMNIKILSFRVTFFSNHKVHPVPDAK*RFRSLTWTDGEHFGRNPIT 740
            PGV+IL+A+P +    G +    + ++SGTSMSCPH+ GIA  +K+ +  WSPAAI+SAL+TTAS      MN         +A+ F  G GHVNP KA+ PGLVYD    DY++FLC  G+N  ++ R+T     C   N     DLN PS  + ++  ++T      R +T+V    S Y A++ AP G+ ++V P V+SFN      SF +T   + K   V        SL W+DG H+ R+PIT
Sbjct:  495 PGVEILAAWPSVAPVGGIRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASP-----MN----ARFNPQAE-FAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGNTGRVWDLNYPSFGL-SVSPSQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRGSIKGFVVS------ASLVWSDGVHYVRSPIT 726          
BLAST of EY680494 vs. ExPASy Swiss-Prot
Match: XSP1_ARATH (Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.446e-36
Identity = 93/254 (36.61%), Postives = 137/254 (53.94%), Query Frame = 3
Query:   12 APGVDILSAYPPI-------GSKDIQGYALLSGTSMSCPHVAGIAALIKSLHRDWSPAAIRSALVTTASQTGTDGMNIFEEGSTRKEADPFDIGGGHVNPNKAMNPGLVYDITVEDYIQFLCFMGHNDASISRLTKSK-INCLK----NNHLALDLNLPSITIPNLHNNETVTVTRKVTNVGQINSAYEALVEAPYGVNMTVEPEVISFNMNIKILSFRVTFFSNHKVHPVPDAK*RFRSLTWTDGEHFGRNPI 737
            APG+DIL+A+          G      + +LSGTSM+CPHVAG+AA +KS H DW+PAAI+SA++T+A                 K+A+ F  GGG +NP +A +PGLVYD+    Y+QFLC  G+N  +++ L  ++ ++C        H +L+     +T+ +   +      R+VTNVG  +S Y A V AP GV +TVEP+ +SF+   +  SF+V      K   +   K     L W    H  R+PI
Sbjct:  502 APGIDILAAFTLKRSLTGLDGDTQFSKFTILSGTSMACPHVAGVAAYVKSFHPDWTPAAIKSAIITSAKPISR---------RVNKDAE-FAYGGGQINPRRAASPGLVYDMDDISYVQFLCGEGYNATTLAPLVGTRSVSCSSIVPGLGHDSLNYPTIQLTLRSAKTSTLAVFRRRVTNVGPPSSVYTATVRAPKGVEITVEPQSLSFSKASQKRSFKVVV----KAKQMTPGKIVSGLLVWKSPRHSVRSPI 741          
The following BLAST results are available for this feature:
BLAST of EY680494 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
SUBL_ARATH7.082e-4239.84Subtilisin-like protease OS=Arabidopsis thaliana G... [more]
CUCM1_CUCME4.021e-3739.76Cucumisin OS=Cucumis melo PE=1 SV=1[more]
XSP1_ARATH4.446e-3636.61Xylem serine proteinase 1 OS=Arabidopsis thaliana ... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-011-F10-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680494 ID=EY680494; Name=EY680494; organism=Citrus sinensis; type=EST; length=821bp
CCACGCGTCCGGCACCGGGTGTGGATATCTTATCCGCATATCCACCAATT
GGCTCAAAGGACATCCAAGGGTATGCACTGCTATCAGGAACTTCAATGTC
TTGCCCCCATGTAGCAGGAATAGCAGCACTCATAAAATCTTTACATCGAG
ACTGGTCCCCAGCAGCCATAAGATCAGCTCTAGTTACAACCGCTTCTCAA
ACCGGAACAGACGGAATGAACATATTTGAGGAAGGCTCTACTCGCAAGGA
AGCAGACCCATTTGACATAGGGGGCGGGCATGTTAATCCTAACAAGGCAA
TGAATCCAGGGCTTGTTTATGACATTACAGTAGAGGACTATATCCAGTTC
CTCTGCTTCATGGGTCACAACGATGCATCAATCAGCAGATTGACCAAGTC
CAAAATCAACTGCTTGAAAAACAACCATCTCGCTCTGGACCTTAACCTCC
CATCTATCACTATCCCAAATCTACATAACAATGAGACAGTTACAGTTACA
AGAAAGGTTACAAATGTGGGACAAATTAACTCAGCTTATGAAGCTCTAGT
GGAGGCTCCGTATGGCGTAAATATGACAGTTGAACCTGAAGTTATAAGTT
TCAATATGAACATCAAAATTCTTTCCTTCAGAGTGACCTTCTTCTCAAAT
CATAAAGTGCATCCAGTCCCAGATGCAAAGTAAAGATTTCGCAGCCTGAC
ATGGACGGATGGGGAACATTTTGGGAGGAACCCCATAACCTTTCGGGGAT
CAAATTTGAATCTTAAATGGCAAAGGAAAAGGAAGGAAGGGAATTTGCCC
TCAATCAAAAAAATGGGAGGG
back to top