EY702733

Overview
NameEY702733
Unique NameEY702733
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig565 contig Csv1_Contig565:69..974. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: AROB_THICR (3-dehydroquinate synthase OS=Thiomicrospira crunogena (strain XCL-2) GN=aroB PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.494e-46
Identity = 94/163 (57.67%), Postives = 120/163 (73.62%), Query Frame = 1
Query:  352 VDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAE 840
            V+LG+RSYPI+IG GLL   +L + +V G +VL+V+N TVAPLYL+K   A +       V  VILPDGE YKN+D L ++FD AIE+R DR+CTFVALG GVIGDM G+AAASY  GV FI  PTT+++QVDS VG KTG+NH   KN+I AF+Q + V+ +
Sbjct:    6 VELGERSYPIFIGQGLLGQAELFKPYVTGTQVLIVSNTTVAPLYLEKAKQAFS----GYDVKTVILPDGEQYKNLDVLNQIFDVAIENRFDRKCTFVALGGGVIGDMTGFAAASYQRGVNFIQIPTTLLSQVDSSVGGKTGVNHPKGKNMIGAFHQPECVVID 164          
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: AROB_PSEE4 (3-dehydroquinate synthase OS=Pseudomonas entomophila (strain L48) GN=aroB PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.238e-45
Identity = 94/165 (56.97%), Postives = 119/165 (72.12%), Query Frame = 1
Query:  346 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAE 840
            ++VDLG+RSYPIYIG GLLD P+LL  H+ G++V +V+N TVAPLYL++++  L       +V  V+LPDGE YKN +TL  VFD  + +R DRR T VALG GVIGDM G+AAA Y  GV FI  PTT+++QVDS VG KTGINH   KN++ AFYQ   VL +
Sbjct:    4 LKVDLGERSYPIYIGEGLLDQPELLAPHIAGRQVAIVSNETVAPLYLERLSKTLGA----YSVLPVVLPDGEKYKNWETLQLVFDALLSARHDRRTTVVALGGGVIGDMAGFAAACYQRGVDFIQVPTTLLSQVDSSVGGKTGINHPLGKNMVGAFYQPNAVLID 164          
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: AROB_RALPJ (3-dehydroquinate synthase OS=Ralstonia pickettii (strain 12J) GN=aroB PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.601e-45
Identity = 91/167 (54.49%), Postives = 122/167 (73.05%), Query Frame = 1
Query:  346 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAELN 846
            V+VDLG R+YPI+IGSGLL   +L   H++G + ++VTN TVAPLY  KV +A+   +   AVD V+LPDGE++K  DTL ++FD  + +  DR+ T +ALG GVIGDM G+AAA Y+ GV FI  PTT+++QVDS VG KTGINH   KN+I AF+Q Q VLA+++
Sbjct:    4 VDVDLGDRAYPIHIGSGLLSKAELFAPHIRGARAVIVTNETVAPLYAAKVEEAIR--SLGKAVDTVVLPDGESFKKWDTLNRIFDALLTAGADRKTTLIALGGGVIGDMTGFAAACYMRGVPFIQVPTTLLSQVDSSVGGKTGINHPLGKNMIGAFHQPQAVLADID 168          
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: AROB_PSEMY (3-dehydroquinate synthase OS=Pseudomonas mendocina (strain ymp) GN=aroB PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.601e-45
Identity = 95/165 (57.58%), Postives = 118/165 (71.52%), Query Frame = 1
Query:  346 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAE 840
            + V+LG+RSYPIYIGSGLL  P+LL +HV G++V VVTN TVAPLYL  +  +L   N    V  V+LPDGE +KN +TL  +FD  + +R DRR T VALG GVIGDM G+AAA Y  GV FI  PTT+++QVDS VG KTGINH   KN++ AFYQ + VL +
Sbjct:    4 LHVELGERSYPIYIGSGLLSRPELLSRHVAGRQVAVVTNETVAPLYLQTLLKSLEGFN----VATVVLPDGEAFKNWETLQLIFDGLLTARHDRRTTVVALGGGVIGDMAGFAAACYQRGVDFIQVPTTLLSQVDSSVGGKTGINHPLGKNMVGAFYQPKAVLID 164          
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: AROB_PSEF5 (3-dehydroquinate synthase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=aroB PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.601e-45
Identity = 92/165 (55.76%), Postives = 120/165 (72.73%), Query Frame = 1
Query:  346 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAE 840
            ++VDLG+RSYPI+IG GLLD P+LL  H+ G++V +++N TVAPLYL++    LTR     +V +V+LPDGE YKN +TL  +FD  + +R DRR T +ALG GVIGDM G+AAA Y  GV FI  PTT+++QVDS VG KTGINH   KN++ AFYQ   VL +
Sbjct:    4 LKVDLGERSYPIHIGEGLLDQPELLVPHIAGRQVAIISNETVAPLYLER----LTRSLGQFSVISVVLPDGEAYKNWETLQLIFDGLLTARHDRRTTIIALGGGVIGDMAGFAAACYQRGVDFIQIPTTLLSQVDSSVGGKTGINHPLGKNMVGAFYQPNVVLID 164          
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: AROB_PSEPK (3-dehydroquinate synthase OS=Pseudomonas putida (strain KT2440) GN=aroB PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.703e-45
Identity = 93/165 (56.36%), Postives = 121/165 (73.33%), Query Frame = 1
Query:  346 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAE 840
            ++VDLG+RSYPIYIG GLLD P+LL  H+ G++V +V+N TVAPLYL++++ AL       +V  V+LPDGE +KN +TL  +FD  + +R DRR T VALG GVIGDM G+AAA Y  GV FI  PTT+++QVDS VG KTGINH   KN++ AFYQ + VL +
Sbjct:    4 LKVDLGERSYPIYIGEGLLDQPELLAPHIAGRQVAIVSNETVAPLYLERLSKALGA----YSVLPVVLPDGEAHKNWETLQLIFDGLLTARHDRRTTVVALGGGVIGDMAGFAAACYQRGVDFIQVPTTLLSQVDSSVGGKTGINHPLGKNMVGAFYQPKAVLID 164          
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: AROB_PSEPW (3-dehydroquinate synthase OS=Pseudomonas putida (strain W619) GN=aroB PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 6.143e-45
Identity = 93/165 (56.36%), Postives = 120/165 (72.73%), Query Frame = 1
Query:  346 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAE 840
            ++VDLG+RSYPIYIG GLLD P+LL  H+ G+++ +V+N TVAPLYL++++ AL       +V  VILPDGE +KN +TL  +FD  + +R DRR T VALG GVIGDM G+AAA Y  GV FI  PTT+++QVDS VG KTGINH   KN++ AFYQ   VL +
Sbjct:    4 LKVDLGERSYPIYIGEGLLDQPELLAPHIAGRQIAIVSNETVAPLYLERLSKALGA----YSVLPVILPDGEAHKNWETLQLIFDGLLTARHDRRTTVVALGGGVIGDMAGFAAACYQRGVDFIQVPTTLLSQVDSSVGGKTGINHPLGKNMVGAFYQPNAVLID 164          
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: AROB_PSEPF (3-dehydroquinate synthase OS=Pseudomonas fluorescens (strain Pf0-1) GN=aroB PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 6.143e-45
Identity = 90/165 (54.55%), Postives = 122/165 (73.94%), Query Frame = 1
Query:  346 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAE 840
            ++VDLG+RSYPI+IG GLLD P+LL  H+ G++V +++N TVAPLYL+++T +L +     +V +V+LPDGE +KN +TL  +FD  + +R DRR T +ALG GVIGDM G+AAA Y  GV FI  PTT+++QVDS VG KTGINH   KN++ AFYQ   VL +
Sbjct:    4 LKVDLGERSYPIHIGEGLLDQPELLAPHIHGRQVAIISNETVAPLYLERLTRSLAQ----FSVVSVVLPDGEAFKNWETLQLIFDGLLTARHDRRTTVIALGGGVIGDMAGFAAACYQRGVDFIQIPTTLLSQVDSSVGGKTGINHPLGKNMVGAFYQPNVVLID 164          
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: AROB_PSEP1 (3-dehydroquinate synthase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=aroB PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 6.143e-45
Identity = 93/165 (56.36%), Postives = 120/165 (72.73%), Query Frame = 1
Query:  346 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAE 840
            ++VDLG+RSYPIYIG GLLD P+LL  H+ G++V +V+N TVAPLYL++++ AL       +V  V+LPDGE +KN +TL  +FD  + +R DRR T VALG GVIGDM G+AAA Y  GV FI  PTT+++QVDS VG KTGINH   KN++ AFYQ   VL +
Sbjct:    4 LKVDLGERSYPIYIGEGLLDQPELLAPHIAGRQVAIVSNETVAPLYLERLSKALGA----YSVLPVVLPDGEAHKNWETLQLIFDGLLTARHDRRTTVVALGGGVIGDMAGFAAACYQRGVDFIQVPTTLLSQVDSSVGGKTGINHPLGKNMVGAFYQPNAVLID 164          
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: AROB_PSEFS (3-dehydroquinate synthase OS=Pseudomonas fluorescens (strain SBW25) GN=aroB PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 6.143e-45
Identity = 91/165 (55.15%), Postives = 121/165 (73.33%), Query Frame = 1
Query:  346 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAE 840
            ++VDLG+RSYPI+IG GLLD P+LL  H+ G++V +++N TVAPLYL+++  +L       +V +VILPDGE +KN +TL  +FD  + +R DRR T +ALG GVIGDM G+AAA Y  GV FI  PTT+++QVDS VG KTGINH   KN++ AFYQ Q VL +
Sbjct:    4 LKVDLGERSYPIHIGEGLLDQPELLAPHIAGRQVAIISNETVAPLYLERLNRSLAA----YSVISVILPDGEAHKNWETLQLIFDGLLTARHDRRTTVIALGGGVIGDMAGFAAACYQRGVDFIQVPTTLLSQVDSSVGGKTGINHPLGKNMVGAFYQPQAVLID 164          
The following BLAST results are available for this feature:
BLAST of EY702733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AROB_THICR2.494e-4657.673-dehydroquinate synthase OS=Thiomicrospira crunog... [more]
AROB_PSEE41.238e-4556.973-dehydroquinate synthase OS=Pseudomonas entomophi... [more]
AROB_RALPJ3.601e-4554.493-dehydroquinate synthase OS=Ralstonia pickettii (... [more]
AROB_PSEMY3.601e-4557.583-dehydroquinate synthase OS=Pseudomonas mendocina... [more]
AROB_PSEF53.601e-4555.763-dehydroquinate synthase OS=Pseudomonas fluoresce... [more]
AROB_PSEPK4.703e-4556.363-dehydroquinate synthase OS=Pseudomonas putida (s... [more]
AROB_PSEPW6.143e-4556.363-dehydroquinate synthase OS=Pseudomonas putida (s... [more]
AROB_PSEPF6.143e-4554.553-dehydroquinate synthase OS=Pseudomonas fluoresce... [more]
AROB_PSEP16.143e-4556.363-dehydroquinate synthase OS=Pseudomonas putida (s... [more]
AROB_PSEFS6.143e-4555.153-dehydroquinate synthase OS=Pseudomonas fluoresce... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-011-F05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702733 ID=EY702733; Name=EY702733; organism=Citrus sinensis; type=EST; length=906bp
AACAAAACCCCGCAACTCAAACACAACTTTAAATTCAAATCCACTCACCA
AACACAAAATCCCCGAACCAATACCCGGACTCGACCCTATTCCATGGCAT
TATCCACGGCCAACTCATTGTCTCCTTCGCTGTCATCCAAACACGCGTCC
AAACAGCCCGAGTTATATACCTGGTTTCACAGCCCTAACGCGATTGCGCT
TAAGTCTCCGCCCTTGGCACCGGCTTCTATTGAGTTGAAACGGAACGGCG
GTTTCGTCCTGGGCGAGTATAAGGTGAACCGCAGGATTTACACGAGTAGT
GCGGATCCGATGATGGATCAAACGGATAGTAAAGCTCCTACGATTGTTGA
GGTGGATTTGGGACAGCGGAGCTACCCGATTTATATCGGATCCGGACTTC
TGGATCATCCCGACCTGCTCCAAAAGCATGTTCAAGGAAAGAAAGTTCTT
GTGGTTACTAACAACACAGTTGCACCATTGTACCTGGATAAAGTTACTGA
TGCTTTGACAAGAGGGAATCCAAATGTTGCAGTTGACAATGTGATTCTGC
CAGATGGTGAGAATTACAAGAACATGGATACTCTCATGAAAGTCTTTGAC
AAGGCCATCGAGTCTCGGCTGGACCGGCGATGTACATTTGTTGCACTTGG
ACGTGGTGTTATTGGTGACATGTGTGGATATGCTGCAGCCTCCTATCTTC
CAGGTGTTACCTTCATTACAAATCCTACAACTGTTATGGCACAGGTAGAT
TCTCCTGTAGGAAGCAAAACTGGCATAAACCACCGGCCTTGCAAGAATTT
GATTTGTGCTTTCTACCAAACTCAGGGGGTTCTCGCCGAACTGAACCATT
AATTACATTGCAAAAGGGGAATGGCATAAGACTTGCACAGGTATCAAGAA
AGGGTC
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