DY306022

Overview
NameDY306022
Unique NameDY306022
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1193
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY306022 vs. ExPASy Swiss-Prot
Match: AB11G_ARATH (ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.315e-27
Identity = 57/144 (39.58%), Postives = 92/144 (63.89%), Query Frame = -3
Query:  310 FACMLLVESLMMIVASLVPNYXXXXXXXXXXXXXXXXXXGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDN-----NLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKMKPVVKAFMS 726
            +A + +VESLMM +AS+VPN+                  GFFRLPND+P PFW+YP+ YI+FH +A QG ++N+  GL FD+      + GE VL + +Q+ +  SKW++L+++  M++ YR++F  +IKT E + P V+ +++
Sbjct:  520 YASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGFFRLPNDIPKPFWRYPMSYISFHFWALQGQYQNDLRGLTFDSQGSAFKIPGEYVLENVFQIDLHRSKWINLSVILSMIIIYRIIFFIMIKTNEDVTPWVRGYIA 663          
BLAST of DY306022 vs. ExPASy Swiss-Prot
Match: AB15G_ARATH (ABC transporter G family member 15 OS=Arabidopsis thaliana GN=ABCG15 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.839e-21
Identity = 55/145 (37.93%), Postives = 86/145 (59.31%), Query Frame = -3
Query:  310 FACMLLVESLMMIVASLVPNYXXXXXXXXXXXXXXXXXXGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKF------DNNLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKMKPVVKAFMS 726
            F  + ++ESLMM+VAS+VPN+                  GFFRL  DLP  FW+YP+ YI++  +A QG +KN+F GL+F      +  + GE+V+   + +++ YSKW DLA +  ++V YRL+F  ++K  E+  P +KA  +
Sbjct:  498 FFSVSVIESLMMVVASVVPNFLMGLITGAGLIGIIMMTSGFFRLLPDLPKIFWRYPVSYISYGSWAIQGGYKNDFLGLEFEPLFPGEPKMTGEEVIEKVFGVKVTYSKWWDLAAVVAILVCYRLLFFVVLKLRERAGPALKAIQA 642          
BLAST of DY306022 vs. ExPASy Swiss-Prot
Match: AB12G_ARATH (ABC transporter G family member 12 OS=Arabidopsis thaliana GN=ABCG12 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.839e-21
Identity = 54/145 (37.24%), Postives = 87/145 (60.00%), Query Frame = -3
Query:  310 FACMLLVESLMMIVASLVPNYXXXXXXXXXXXXXXXXXXGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFD------NNLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKMKPVVKAFMS 726
            F  + ++ESLMM+VASLVPN+                  GFFRL  DLP  FW+YP+ ++++  +A QG +KN+F GL+FD        + GEQV+   + +Q+ +SKW DL+ +  ++V YR++F  ++K  E+ +P +KA  +
Sbjct:  499 FFSVSVIESLMMVVASLVPNFLMGLITGAGIIGIIMMTSGFFRLLPDLPKVFWRYPISFMSYGSWAIQGAYKNDFLGLEFDPMFAGEPKMTGEQVINKIFGVQVTHSKWWDLSAIVLILVCYRILFFIVLKLKERAEPALKAIQA 643          
BLAST of DY306022 vs. ExPASy Swiss-Prot
Match: AB13G_ARATH (ABC transporter G family member 13 OS=Arabidopsis thaliana GN=ABCG13 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 9.445e-18
Identity = 49/134 (36.57%), Postives = 76/134 (56.72%), Query Frame = -3
Query:  325 VESLMMIVASLVPNYXXXXXXXXXXXXXXXXXXGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDN------NLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKMKPVV 708
            VES MM++AS+VPN+                  GFFR   DLP  FW+YP+ YI +  +A QG +KNE  G+++D+       + GE +L+    +    SKW+DLA++  +++ YR+ F  I+K  EK+ PV+
Sbjct:  499 VESCMMMIASVVPNFLMGVMLGAGYIGIMVLSAGFFRFFPDLPMVFWRYPVSYINYGAWALQGAYKNEMIGVEYDSPLPLVPKMKGELILQTVLGINPESSKWLDLAVVMMILIGYRIAFFAILKFREKVFPVI 632          
The following BLAST results are available for this feature:
BLAST of DY306022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
AB11G_ARATH1.315e-2739.58ABC transporter G family member 11 OS=Arabidopsis ... [more]
AB15G_ARATH1.839e-2137.93ABC transporter G family member 15 OS=Arabidopsis ... [more]
AB12G_ARATH1.839e-2137.24ABC transporter G family member 12 OS=Arabidopsis ... [more]
AB13G_ARATH9.445e-1836.57ABC transporter G family member 13 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM3BB08RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306022 ID=DY306022; Name=DY306022; organism=Citrus sinensis; type=EST; length=1193bp
ATAGAAACTTTATAATTAATAGTCGACAAATAAAAATTAAAGATAAAGAA
GTAAATCTTGATCATACAAAAATACAATAATAAAAGTAGTTAAAGGATGT
TTCAAAGCTAAAATATGCTTCCTAATTAAATTATTCCTCTTCCACCCATG
AGAACAGAGTTTTTGTACCTACTTCGAGCAATTTTACTAGTTGAACTAGC
GAATATCCGAAGAGTCGTTTGTTCACGATCACTGGTAAAATATTTTGTCT
TCTTGTGGAGGTGTAGCACACGGATTTTCCATGATTTGAGTTGTTTGTTT
CATGGGCACAGACATAAAAGCTTTAACCACAGGCTTCATCTTTTCAACTG
TCTTGATGATTCCCAAGAATACAAGTCGATAAAAAACCACCATACCAAAC
AAGATAGCAAGATCAACCCACTTAGAATATCCCATTTGCAGTTGCCATTT
ATCTCTCAAAACCTGTTCGCCATCTAGATTGTTGTCAAATTTCAGACCTT
CAAACTCGTTCTTGAACATTCCTTGGTACGCATATTTATGGAAAGCAATA
TAATATAATGGGTATTTCCAAAATGGATGAGGAAGATCATTTGGCAATCG
AAAAAATCCGCCGCCTAATATCATAAGGCCTTAAATTCCAGCTCCTGTTA
TTATGCCCGTCAGATAATTGGGCACCAAGCTTGCAACGATCATCATTAGG
CTCTCGACGAGCAACATGCAAGCAAACCCTCGTGCCGAATTCGGCACGAG
GGAAAGATGAAGATAAAGATTTCGAGGTTACTGACGATTACAAGGAAAGG
CATTACAGGGGAGTGAGGAGACGGCCGTGGGGAAATATGCAGCTGAAATT
CGTGACCCGAATAAAAGGGGACCGGGGTTGGGCTGGGAACTTTTATACTG
GCCGTAAACCTGCAAAAACTAAGAAAACGCGGCTTTTAGAAGGCGGGAAA
AAAAACCCAAACGAAATTTTCCCCTGAAAATGGGGGAATCATTTTTGAAC
TCGAAAAAATGGCCCAAAGTTAAATGGTGGGAAAAAAAAGAAAAAATAAG
AAAAAAAAAAAAATTTGAAAAAAAAAGTGGCCCGGGAAAAAAGGAGAGAA
AGGGGGGAGAGGGGGGGGTGGGTTTTGGGCTTCGGGAAACCCTTTTGAAC
CCCCCCCCCCACAGTTTTGGAAGCCGCGGGGTTTTTGTGGGGG
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