DY305903
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY305903 vs. ExPASy Swiss-Prot
Match: DNLI1_ARATH (DNA ligase 1 OS=Arabidopsis thaliana GN=At1g08130 PE=2 SV=2) HSP 1 Score: 486.493 bits (1251), Expect = 1.411e-136 Identity = 239/308 (77.60%), Postives = 277/308 (89.94%), Query Frame = 2 Query: 2 MLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQATVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAGFRLKKPSVKSFCLDWEIVAYNREKQKILP 925 MLRTV+ TTPEDLV VYL+AN+IAPAHEG+ELGIG+++IIKA++EA GRTE HVKKQ E+GDLGLVAK SRS+Q+MM KP+PLT+ KVFDTFR IAKE+GKDS EKKKNR+KALLVA TDCEP YL RLLQ+KLR+G + QT+LAALGQA VYNE+HSKPPPN +SPLEEAAKIVKQVF+VLPVY+ IVPALL+ GVWNL TC+FT G+PIGPMLAKPTKGV+EI+NKFQD+ FTCEYKYDGERAQIH++EDG+ EIYSRNAERNTGK+PDV LA RLKKPSVKSF LD E+VA++REK+KILP Sbjct: 203 MLRTVIATTPEDLVATVYLSANEIAPAHEGVELGIGESTIIKAISEAFGRTEDHVKKQNTELGDLGLVAKGSRSTQTMMFKPEPLTVVKVFDTFRQIAKESGKDSNEKKKNRMKALLVATTDCEPLYLTRLLQAKLRLGFSGQTVLAALGQAAVYNEEHSKPPPNTKSPLEEAAKIVKQVFTVLPVYDIIVPALLSGGVWNLPKTCNFTLGVPIGPMLAKPTKGVAEILNKFQDIVFTCEYKYDGERAQIHFMEDGTFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILP 510
BLAST of DY305903 vs. ExPASy Swiss-Prot
Match: DNLI1_XENLA (DNA ligase 1 OS=Xenopus laevis GN=lig1 PE=2 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 9.617e-77 Identity = 153/319 (47.96%), Postives = 205/319 (64.26%), Query Frame = 2 Query: 5 LRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQATVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAGFRLKKPSVKSFCLDWEIVAYNREKQKILP 925 LR+V+ TPEDL+P +YL N++ PA+EGLELGIG+ ++KA+A+A GR +K + QE GDLGLVA++SRS+Q M P L + VF + IA+ G S KK + IK L VA E +Y+ R L KLRIGLAEQ++L+++ QA PP + +S +EE A I+KQ F LP Y+ I+P LL G+ +L C TPGIP+ PMLA PTKG+ E++ +F + FTCEYKYDGERAQIH LE+G V +YSRN E NT K+PD++ ++KK SVKS LD E VA + EK++I P Sbjct: 469 LRSVIALTPEDLLPCIYLCLNRLGPAYEGLELGIGETILMKAVAQATGRQLEKIKAEAQEKGDLGLVAESSRSNQRTMFTPPKLMASGVFGKLKDIARMTGNASMNKKIDIIKGLFVACRHSEARYIARSLGGKLRIGLAEQSVLSSIAQAVCLTPPGRDAPPTVMDAGKGMSADARKSWIEEKAMILKQTFCELPNYDAIIPILLEHGIDDLPKHCRLTPGIPLKPMLAHPTKGIGEVLKRFDEAAFTCEYKYDGERAQIHILENGEVHVYSRNQENNTTKYPDIISRIPKIKKESVKSCILDTEAVAGDAEKKQIQP 787
BLAST of DY305903 vs. ExPASy Swiss-Prot
Match: DNLI1_MOUSE (DNA ligase 1 OS=Mus musculus GN=Lig1 PE=1 SV=2) HSP 1 Score: 287.73 bits (735), Expect = 9.617e-77 Identity = 151/326 (46.32%), Postives = 212/326 (65.03%), Query Frame = 2 Query: 2 MLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQATVYNEQHSKPPPNIQSP------------------LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAGFRLKKPSVKSFCLDWEIVAYNREKQKILP 925 +LR+V+ +P DL+PV+YL+ N++ P +GLELG+GD ++KA+A+A GR ++ + E GD+GLVA+ SRS+Q +M P PLTI+ VF F IA+ G S KK + IK L VA E +Y+ R L +LR+GLAEQ++LAAL QA S PP + P LEE I+KQ F +P ++I+P LL G+ L C +PG+P+ PMLA PT+GVSE++ +F++++FTCEYKYDG+RAQIH LE G V+I+SRN E NTGK+PD++ ++K PSV SF LD E VA++REK++I P Sbjct: 313 LLRSVVALSPPDLLPVLYLSLNRLGPPQQGLELGVGDGVLLKAVAQATGRQLESIRAEVAEKGDVGLVAENSRSTQRLMLPPPPLTISGVFTKFCDIARLTGSASMAKKMDIIKGLFVACRHSEARYIARSLSGRLRLGLAEQSVLAALAQAV------SLTPPGQEFPTVVVDAGKGKTAEARKMWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHCKLSPGVPLKPMLAHPTRGVSEVLKRFEEVDFTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKHPSVTSFILDTEAVAWDREKKQIQP 632
BLAST of DY305903 vs. ExPASy Swiss-Prot
Match: DNLI1_HUMAN (DNA ligase 1 OS=Homo sapiens GN=LIG1 PE=1 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 8.142e-76 Identity = 149/320 (46.56%), Postives = 210/320 (65.62%), Query Frame = 2 Query: 2 MLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQATVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAGFRLKKPSVKSFCLDWEIVAYNREKQKILP 925 +LR+V+ +P DL+PV+YL+ N + P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +M P PLT + VF FR IA+ G S KK + IK L VA E +++ R L +LR+GLAEQ++LAAL QA + PP + ++ LEE I+KQ F +P ++I+P LL G+ L C +PGIP+ PMLA PT+G+SE++ +F++ FTCEYKYDG+RAQIH LE G V+I+SRN E NTGK+PD++ ++K PSV SF LD E VA++REK++I P Sbjct: 315 LLRSVVALSPPDLLPVLYLSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRLMLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLTPPGQEFPPAMVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGISEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQP 634
BLAST of DY305903 vs. ExPASy Swiss-Prot
Match: DNLI1_DICDI (DNA ligase 1 OS=Dictyostelium discoideum GN=lig1 PE=3 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 2.005e-74 Identity = 145/320 (45.31%), Postives = 213/320 (66.56%), Query Frame = 2 Query: 2 MLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAT------------VYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALL-TDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAGFRLKKPSVKSFCLDWEIVAYNREKQKIL 922 + R++M +P+DLV +YL+ NKI P+++ ELGIG+ +IK+LAE+ GR+ +K++ E+GDLG++A+ SRS+Q++M KP PLTI VF TF+ IA +G Q+KKK+ IK LLV+ DCE Y+IR LQ KLRIGLAE+++L AL ++ +++ + + + V + +S LP Y+ VP L+ +G+ N+ +TCS GIP+ PMLA+PT G+S+++++F DMEFTCE+KYDGERAQIH L DG+ IY+RN E T K+PD+V + P+VKSF LD E VA++ +KIL Sbjct: 590 LFRSIMLLSPKDLVMTIYLSINKIGPSYQSKELGIGEHVLIKSLAESTGRSVDVIKQELTEVGDLGIIAQNSRSTQTLMGKPTPLTIQSVFKTFQQIADLSGTGGQQKKKDLIKKLLVSCKDCETLYIIRSLQGKLRIGLAERSVLMALAKSVLVTPPIDGSGQQIFDIRKQMKQEEFEERYQNVVSKVTRAYSQLPNYDLFVPHLIAVNGIDNILSTCSLKVGIPVKPMLAQPTTGISQMLDRFSDMEFTCEFKYDGERAQIHRLPDGTTHIYTRNLEDYTQKYPDIVANVTKFVGPNVKSFILDCEAVAFDAATKKIL 909
BLAST of DY305903 vs. ExPASy Swiss-Prot
Match: DNLI1_SCHPO (DNA ligase 1 OS=Schizosaccharomyces pombe GN=cdc17 PE=2 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 2.217e-73 Identity = 139/304 (45.72%), Postives = 196/304 (64.47%), Query Frame = 2 Query: 14 VMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQATVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAGFRLKKPSVKSFCLDWEIVAYNREKQKILP 925 ++ P DL+ VYL+ NK+ P + GLELGIG++ I+KA+ E+ G+T +K + ++GDLGLVA+ SR +Q M KP LTI +FD+ + IA+ +G SQ +K IK LL + EP+YLIR L+ KLR+ LAE+T+L AL AT Q E +I++ V+ LP Y+ IVP L+ G+ L TC TPGIP PMLAKPTK +SE++N F FTCEYKYDGERAQ+H+ EDG ++SRN+E + ++PD+ ++ + KKP +SF LD E V ++R++ KILP Sbjct: 179 ILRDHPSDLLACVYLSINKLGPDYSGLELGIGESIIMKAIGESTGQTLQQIKLSFHKVGDLGLVAQTSRQNQPTMFKPAALTIPFLFDSLKKIAQMSGNQSQNRKIGVIKRLLSSCEGAEPKYLIRALEGKLRLQLAEKTILVALANATAQYHADKNGEKLSQQDRIEGEQILRDVYCQLPSYDLIVPHLIEHGLGTLRETCKLTPGIPTKPMLAKPTKQISEVLNTFDQAAFTCEYKYDGERAQVHFTEDGKFYVFSRNSENMSVRYPDISVSVSKWKKPDARSFILDCEAVGWDRDENKILP 482
BLAST of DY305903 vs. ExPASy Swiss-Prot
Match: DNLI1_RAT (DNA ligase 1 OS=Rattus norvegicus GN=Lig1 PE=2 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 8.425e-73 Identity = 145/326 (44.48%), Postives = 210/326 (64.42%), Query Frame = 2 Query: 2 MLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQATVYNEQHSKPPPNIQSP------------------LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAGFRLKKPSVKSFCLDWEIVAYNREKQKILP 925 +LR+V+ +P DL+PV+YL+ N++ P +GLELG+GD ++KA+A+A GR ++ + E GD+GLVA+ SRS+Q +M PLT++ VF F IA+ G S KK + IK L VA E +++ R L +LR+GLAEQ++LAAL QA S PP + P LEE I+KQ F +P ++I+P LL G+ +L C +PG+P+ PMLA PT+GV E++ +F++++FTCEYKY G+RAQIH LE G V+I+SRN E N+GK+PD++ ++K PSV SF LD E VA++REK++I P Sbjct: 315 LLRSVVALSPTDLLPVLYLSLNRLGPPQQGLELGVGDGVLLKAVAQATGRQLESIRAEVAEKGDVGLVAENSRSTQRLMLPSPPLTVSGVFTKFCDIARLTGSASMAKKMDIIKGLFVACRYSEARFIARSLSGRLRLGLAEQSVLAALAQAG------SLTPPGQEFPTVVVDAGKGKTAEARKMWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLESLPEHCKLSPGVPLKPMLAHPTRGVREVLKRFEEVDFTCEYKYYGQRAQIHVLEGGEVKIFSRNQEDNSGKYPDIISRIPKIKHPSVTSFILDTEAVAWDREKKQIQP 634
BLAST of DY305903 vs. ExPASy Swiss-Prot
Match: DNLI1_YEAST (DNA ligase 1 OS=Saccharomyces cerevisiae GN=CDC9 PE=1 SV=2) HSP 1 Score: 268.855 bits (686), Expect = 4.623e-71 Identity = 133/308 (43.18%), Postives = 206/308 (66.88%), Query Frame = 2 Query: 14 VMETTPEDLVPVVYLAANKIAPAHE-GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQATVYNEQHSKPPPNIQSP---LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAGFRLKKPSVKSFCLDWEIVAYNREKQKILP 925 +M+ + ++L+P YL N++ P +E GLELG+G+ ++K ++E CG++ S +K +Y+++GDLG +A +R+ Q M KP PLT+ +VF R IAK GKDSQ KK IK +L A E ++LIR L+SKLRIGLAE+T+L +L +A + ++++ + P+ P LE A + ++ F +P YE ++ + L G+ NL C+ PGIP+ PMLAKPTK ++E++++FQ FT EYKYDGERAQ+H L DG++ IYSRN E T ++P++ + F + K+ LD E VA+++++ KILP Sbjct: 178 IMKQSSKNLIPTTYLFINRLGPDYEAGLELGLGENLLMKTISETCGKSMSQIKLKYKDIGDLGEIAMGARNVQPTMFKPKPLTVGEVFKNLRAIAKTQGKDSQLKKMKLIKRMLTACKGIEAKFLIRSLESKLRIGLAEKTVLISLSKALLLHDENREDSPDKDVPMDVLESAQQKIRDAFCQVPNYEIVINSCLEHGIMNLDKYCTLRPGIPLKPMLAKPTKAINEVLDRFQGETFTSEYKYDGERAQVHLLNDGTMRIYSRNGENMTERYPEINITDFIQDLDTTKNLILDCEAVAWDKDQGKILP 485
BLAST of DY305903 vs. ExPASy Swiss-Prot
Match: DNLI1_DROME (DNA ligase 1 OS=Drosophila melanogaster GN=CG5602 PE=1 SV=2) HSP 1 Score: 259.225 bits (661), Expect = 3.663e-68 Identity = 138/310 (44.52%), Postives = 197/310 (63.55%), Query Frame = 2 Query: 11 TVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQATVYNE-----QHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAGFRLKKPSVKSFCLDWEIVAYNREKQKILP 925 +VM +PEDLVP VYL+ N++APA+EGLELG+ + +++KA+ +A GR +H+K Q Q GDLG+VA+ SR SQ MM +P PL + VF R IAK +G + K + + + VA E ++ IR L KLRIG+AEQ+LL AL V + SK P + + + ++K + P Y+ I+PA+L + L C PG+P+ PMLA+PTKGV E+ +F M+ TCE+KYDGERAQIH E G + I+SRN+E NT K+PD++ L K VKS+ +D EIVA++ E+++ILP Sbjct: 156 SVMLVSPEDLVPSVYLSINQLAPAYEGLELGVAETTLMKAICKATGRNLAHIKSQTQLTGDLGIVAEQSRVSQRMMFQPAPLNVRDVFRKLREIAKLSG----QSKMDLVYNMFVACRSSEARFFIRSLIGKLRIGIAEQSLLTALAIGLVKKNHIDDCKASKVPDVYKDEIVDTTLLLKTAYCQCPNYDIIIPAILKYDIKELQERCPMHPGMPLRPMLAQPTKGVHEVFERFGGMQITCEWKYDGERAQIHRNEKGEISIFSRNSENNTAKYPDLIARSTALLKGDVKSYIIDSEIVAWDVERKQILP 461
BLAST of DY305903 vs. ExPASy Swiss-Prot
Match: DNLI1_CAEEL (DNA ligase 1 OS=Caenorhabditis elegans GN=lig-1 PE=2 SV=2) HSP 1 Score: 249.98 bits (637), Expect = 2.222e-65 Identity = 135/306 (44.12%), Postives = 194/306 (63.40%), Query Frame = 2 Query: 14 VMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA-TVYNEQHSKPPPNIQSPLEEA-AKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAGFRLKKPSVKSFCLDWEIVAYNREKQKILP 925 V++ +P+DL VY++ N++ P++EGLELG+ + S+IKA+A+A GRTE +K+ + GDLG VA+ SRS+Q M+ P LT+ VF+ IAK +G + KK + I ALL+A E ++L+R+L K+RIGL EQ++L+ALG A T+ K + L++A K VK + P Y +++ LT+GV L C +PGIP+ PMLA PTKG+ EI+ +F++ TCE+KYDGER QIH EDG + IYSRN E NT K+PD++ V SF +D E+VA + E ILP Sbjct: 50 VLDFSPDDLTACVYMSVNQLGPSYEGLELGVAENSLIKAVAKATGRTEGKIKEDLRAKGDLGTVAQQSRSNQKMLAVPKALTVPTVFNKLTEIAKLSGTSAMNKKVDAISALLIACQGIEARFLVRMLAGKMRIGLGEQSVLSALGHAFTLSKITDQKVRGDKLDSLKDANVKRVKTAYCECPNYNRLIEVALTEGVEALVEKCKLSPGIPLKPMLAHPTKGIDEIMRRFRNQTMTCEWKYDGERGQIHKREDGQIFIYSRNQENNTTKYPDIIEKISSCIGDGVTSFIVDAEVVAID-EAGLILP 354 The following BLAST results are available for this feature:
BLAST of DY305903 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305903 ID=DY305903; Name=DY305903; organism=Citrus sinensis; type=EST; length=1260bpback to top |