DY305825

Overview
NameDY305825
Unique NameDY305825
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length988
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY305825_ssr56 microsatellite DY305825_ssr56:56..67. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: EF105_ARATH (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana GN=ERF105 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 6.964e-45
Identity = 92/200 (46.00%), Postives = 119/200 (59.50%), Query Frame = 3
Query:   45 MAAGHHHHQDHEALTLERISQYLLNDLTPMDSYSFISNLPQQNPASTDEQILVQKTSSTLSQRKPSSINVRIPPPTTSIFRLKDEDKDLEVADDYKERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFPLEIGEISLDSDEVQQVDCGKKRKYEENEEFERKV---AVKKEE 635
            MA+ H   Q+ +   L+ I+Q+LL D   +D++           AST        T+STLSQRKP    + +P  TT+            V  +  +RHYRGVRRRPWGKYAAEIRDPNKKG RVWLGTF+TA+EAA+ YD AAFK+RG KAILNFPLE G+     D  + +    KRK +  E+  + +   AVK+EE
Sbjct:    1 MASSHQQQQEQDQSALDLITQHLLTDFPSLDTF-----------ASTIHHC----TTSTLSQRKPPLATIAVP--TTA-----------PVVQENDQRHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFPLEAGKHEDLGDNKKTISLKAKRKRQVTEDESQLISRKAVKREE 172          

HSP 2 Score: 45.8246 bits (107), Expect = 6.964e-45
Identity = 21/30 (70.00%), Postives = 22/30 (73.33%), Query Frame = 1
Query:  664 PLTPSSWTGFWDDGN----GIFSVPPLSPC 741
            PLTPSSW GFWD  +    GIFSVP LSPC
Sbjct:  181 PLTPSSWKGFWDGADSKDMGIFSVPLLSPC 210          
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: EF104_ARATH (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF104 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.833e-43
Identity = 91/195 (46.67%), Postives = 117/195 (60.00%), Query Frame = 3
Query:   78 EALTLERISQYLLNDLTPM--DSYSFISNLPQQNPASTDEQILVQ---KTSSTLSQRKPSSINVRIPPPTTSIFRLKDEDKDLEVADDYKERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFPLEIGEISLDSDEVQQVDCGKKRKYEENEEFERKVA-VKKEETVS 644
            EAL ++ ISQ+LL D   M  D  S  +N      + T  + +     K +STL+QRKP       P P  S+ R      + E     +ERHYRGVRRRPWGKYAAEIRDPNKKG R+WLGT++TAVEA +AYD AAF++RGRKAILNFPL++   S        +  GK+++ + +   E K A VK EE  S
Sbjct:    6 EALAIDFISQHLLTDFVSMETDHPSLFTNQLHNFHSETGPRTITNQSPKPNSTLNQRKP-------PLPNLSVSRTVSTKTEKEE----EERHYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFPLDVRVTSETCSGEGVIGLGKRKRDKGSPPEEEKAARVKVEEEES 189          

HSP 2 Score: 48.521 bits (114), Expect = 2.833e-43
Identity = 21/27 (77.78%), Postives = 23/27 (85.19%), Query Frame = 1
Query:  664 PLTPSSWTGFWD--DGNGIFSVPPLSP 738
            PLTPSSW GFWD   G+GIFS+PPLSP
Sbjct:  204 PLTPSSWMGFWDVGAGDGIFSIPPLSP 230          
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 3.060e-42
Identity = 85/183 (46.45%), Postives = 113/183 (61.75%), Query Frame = 3
Query:   99 ISQYLLNDLTPMDSYSFISNLPQQNPASTDEQILVQKTSSTLSQRKPSSINVRIPPPTTSIFRLKDEDKDLEVADDYKERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFPLEIGEISLDSDEV-QQVDCGKKRKYE-ENEEFERKVAVKKEETV 641
            IS +  N  T  DS+ F     +  P  +  +I       T  + +  S+N+ IP       + ++  + +EV    K +HYRGVR+RPWGK+AAEIRDPN+KGTRVWLGTF+TA+EAAKAYD AAFK+RG KAI+NFPLE+       +E+ Q  + G+KR  E ENEE   K  VK+EE V
Sbjct:   76 ISSFFNNSKTEFDSFEF-----ETKPNVSAARISSNSPKQTSFKERKPSLNIAIP------MKQQEVVQKVEVVPTEK-KHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAFKLRGSKAIVNFPLEVANFKQQDNEILQPANSGRKRMRETENEEIVIKKEVKREERV 246          

HSP 2 Score: 44.669 bits (104), Expect = 3.060e-42
Identity = 19/27 (70.37%), Postives = 21/27 (77.78%), Query Frame = 1
Query:  664 PLTPSSWTGFWD--DGNGIFSVPPLSP 738
            PLTPSSW+  W+  DG GIF VPPLSP
Sbjct:  252 PLTPSSWSAIWEGEDGKGIFEVPPLSP 278          
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: ERF5_NICSY (Ethylene-responsive transcription factor 5 OS=Nicotiana sylvestris GN=ERF5 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.209e-37
Identity = 76/179 (42.46%), Postives = 114/179 (63.69%), Query Frame = 3
Query:   99 ISQYLLNDLTPMDSYSFISNLPQQNPASTDEQILVQKTSSTLSQRKPSSINVRIPPPTTSIFRLKDEDKDLEVADDYKERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFPLEIGEISLD-SDEVQQVDCGKKRKYEENEEFERKVAVKKE 632
            +S +  N  T  DS+ F   +P  + A +     +++TS    +RKPS +N+ IP     +       + +E+A   K +HYRGVR+RPWGK+AAEIRDPN+KGTRVWLGTF+TA+EAAKAYD AA+K+RG KAI+NFPLE+     + ++E++ +    +++  E    E ++ + KE
Sbjct:   72 VSTFFNNSKTEFDSFEF-GTIPNVSAARSSS---LKQTS--FKERKPS-LNIAIPVKQEVV-------QKVELAPTEK-KHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAYKLRGSKAIVNFPLEVANFKQEFNNEIRPLVNSSRKRVRETVN-EEQLVINKE 234          

HSP 2 Score: 46.2098 bits (108), Expect = 1.209e-37
Identity = 20/27 (74.07%), Postives = 21/27 (77.78%), Query Frame = 1
Query:  664 PLTPSSWTGFWD--DGNGIFSVPPLSP 738
            PLTPSSW+  WD  DG GIF VPPLSP
Sbjct:  246 PLTPSSWSAIWDSGDGKGIFEVPPLSP 272          
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: EF106_ARATH (Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana GN=ERF106 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.405e-29
Identity = 83/200 (41.50%), Postives = 113/200 (56.50%), Query Frame = 3
Query:   78 EALTLERISQYLLNDLTPMDSY--------SFISNL-------PQQNPAST--DEQILVQKTSSTLSQRKPSSINVRIPPPTTSIFRLKDEDKDLEVADDYKE----RHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFPLEIGEISLDSDEVQQVDCGKKRKYEE-NEEFER 611
            E+  LE I  +LL DL   D +        SF+S L       P+Q P S   D    V +      +   SS      P   S     + D+ ++ A+ ++E    RHYRGVRRRPWGK+AAEIRDP KKG+R+WLGTF + V+AA+AYD AAFK+RGRKA+LNFPL+ G+    ++       G+KRK  + +EE +R
Sbjct:    6 ESSDLEAIQSHLLEDLLVCDGFMGDFDFDASFVSGLWCIEPHVPKQEPDSPVLDPDSFVNEFLQVEGESSSSS-----SPELNSSSSTYETDQSVKKAERFEEEVDARHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPLDAGKYEAPANS------GRKRKRSDVHEELQR 194          
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.337e-29
Identity = 73/169 (43.20%), Postives = 107/169 (63.31%), Query Frame = 3
Query:  225 SQRKPSSINVRIPPPTTSIFRLKDEDKD--LEVADDYKERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFPLEIGEISLDSDEVQQVDCGKKRKYEENEE---FERKVAVKKEETVSGWCWTXPFDAVKLDRVLG*WKWDI 716
            SQ +   + + +P  T  I    +  K    +   + +++HYRGVR+RPWGK+AAEIRDPNK+G+RVWLGTF+TA+EAA+AYD AAF++RG KAILNFPLE+G+    +DE +     KKRK +++E+    E+ +  ++   V+G   T PF    L  +     WD+
Sbjct:  115 SQIRKPPLKISLPAKTEWIQFAAENTKPEVTKPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNFPLEVGKWKPRADEGE-----KKRKRDDDEKVTVVEKVLKTEQSVDVNGG-ETFPFVTSNLTELC---DWDL 274          
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: EF103_ARATH (Ethylene-responsive transcription factor 6 OS=Arabidopsis thaliana GN=ERF6 PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 3.825e-27
Identity = 78/178 (43.82%), Postives = 108/178 (60.67%), Query Frame = 3
Query:  135 DSYSFISNLPQQNPASTDEQILVQKTSSTLSQRKPSSINVRIPPPTTSI---FRLKDEDKDLEV--ADDYKERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFPLEIGEISLDSDEVQQVDCGKKRKYEENEEFERKVAVKKEET--VSG 647
            DS++F SN P+         + VQ      S RKP    ++I PP  +    F   +   +L V      ++RHYRGVR RPWGK+AAEIRDP ++GTRVWLGTF TA+EAA+AYD  AF++RG KAILNFPLE+ + +  +++ + +   +KR  EE E    +  +K EE+  VSG
Sbjct:   81 DSFTFQSNPPR---------VTVQ------SNRKPP---LKIAPPNRTKWIQFATGNPKPELPVPVVAAEEKRHYRGVRMRPWGKFAAEIRDPTRRGTRVWLGTFETAIEAARAYDKEAFRLRGSKAILNFPLEVDKWNPRAEDGRGLYNKRKRDGEEEEVTVVEKVLKTEESYDVSG 240          
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: EF107_ARATH (Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana GN=ERF107 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 7.214e-26
Identity = 74/189 (39.15%), Postives = 103/189 (54.50%), Query Frame = 3
Query:   78 EALTLERISQYLLNDLTPMDSY---------SFISNL---------PQQNPAST--DEQILVQKTSSTLSQRKPSSINVRIPPPTTSIFRLKDEDKDLEVADDYKERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFPLEIGEISLDSDEVQQVDCGKKRK 584
            E+  L+ I ++L  DL   D +         +F+S L         P+  P+S   D    VQ+     ++   SS     P   T   R K +  +       + RHYRGVRRRPWGK+AAEIRDP KKG+R+WLGTF + ++AA+AYD AAFK+RGRKA+LNFPL+ G+     +      C K+R+
Sbjct:    6 ESSDLDVIQKHLFEDLMIPDGFIEDFVFDDTAFVSGLWSLEPFNPVPKLEPSSPVLDPDSYVQEILQMEAESSSSSSTTTSPEVETVSNRKKTKRFE-------ETRHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNFPLDAGKYDAPVN-----SCRKRRR 182          
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: ERF94_ARATH (Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana GN=ERF094 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.465e-23
Identity = 52/96 (54.17%), Postives = 70/96 (72.92%), Query Frame = 3
Query:  288 LKDEDKDLEVADDYKERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFPLEIGEISLDSDEVQQVDCGK 575
            +K+E K+  VA + +E+ YRGVR+RPWGK+AAEIRD  +KG RVWLGTF+TA  AA AYD AAF ++G  A+LNFP ++ E SL   E   ++ G+
Sbjct:   64 IKEEGKEATVAAEEEEKSYRGVRKRPWGKFAAEIRDSTRKGIRVWLGTFDTAEAAALAYDQAAFALKGSLAVLNFPADVVEESLRKMENVNLNDGE 159          
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 7.465e-23
Identity = 64/153 (41.83%), Postives = 90/153 (58.82%), Query Frame = 3
Query:  204 QKTSSTLSQRKPSSINVRIPPPTT-----SIFRLKDEDKDLEVA-DDYKERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFPLEIGEISLDSDEVQQVDCGKKRKYEENEEFERKVAVKKEETVS 644
            + +SS+  + + S  +V+I  P +     S+   K++   +  A    K +HYRGVR+RPWGK+AAEIRDP K G RVWLGTF TA +AA AYD AAF+MRG +A+LNFPL +     D   ++     K+  +  + E     A KK  TV+
Sbjct:   96 EPSSSSSDEDRSSFPSVKIETPESFAAVDSVPVKKEKTSPVSAAVTAAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLRVNSGEPDPVRIK----SKRSSFSSSNE---NGAPKKRRTVA 241          
The following BLAST results are available for this feature:
BLAST of DY305825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
EF105_ARATH6.964e-4546.00Ethylene-responsive transcription factor ERF105 OS... [more]
EF104_ARATH2.833e-4346.67Ethylene-responsive transcription factor ERF104 OS... [more]
ERF5_TOBAC3.060e-4246.45Ethylene-responsive transcription factor 5 OS=Nico... [more]
ERF5_NICSY1.209e-3742.46Ethylene-responsive transcription factor 5 OS=Nico... [more]
EF106_ARATH1.405e-2941.50Ethylene-responsive transcription factor ERF106 OS... [more]
EF102_ARATH5.337e-2943.20Ethylene-responsive transcription factor 5 OS=Arab... [more]
EF103_ARATH3.825e-2743.82Ethylene-responsive transcription factor 6 OS=Arab... [more]
EF107_ARATH7.214e-2639.15Ethylene-responsive transcription factor ERF107 OS... [more]
ERF94_ARATH7.465e-2354.17Ethylene-responsive transcription factor ERF094 OS... [more]
EF100_ARATH7.465e-2341.83Ethylene-responsive transcription factor 1A OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2CA01RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305825 ID=DY305825; Name=DY305825; organism=Citrus sinensis; type=EST; length=988bp
GCCACTTCCTGTTTACTCAAATTTTACAACTAATATTTTTTGAAATGGCA
GCTGGTCATCATCATCACCAAGATCATGAAGCTTTAACCTTAGAGCGCAT
AAGCCAGTACCTCCTCAATGACTTAACACCGATGGATAGCTATAGCTTCA
TCTCCAACCTCCCGCAGCAAAACCCTGCTTCCACTGATGAACAAATTTTA
GTACAAAAGACATCAAGCACTCTAAGTCAACGCAAGCCTTCTTCTATAAA
CGTAAGAATACCTCCTCCAACTACTAGCATCTTCAGGTTGAAAGATGAAG
ATAAAGATTTGGAGGTTGCTGACGATTACAAGGAAAGGCATTACAGGGGA
GTGAGGAGACGGCCGTGGGGAAAATATGCAGCTGAAATTCGTGACCCGAA
TAAAAAGGGGACCCGGGTTTGGCTTGGAACATTTAATACTGCCGTTGAAG
CTGCGAAAGCTTATGACAACGCTGCCTTTAAGATGCGTGGAAGAAAAGCC
ATACTGAATTTTCCTCTTGAAATTGGTGAGATCAGTTTGGACTCTGATGA
AGTGCAGCAAGTTGATTGTGGGAAAAAGAGGAAATATGAGGAAAACGAGG
AGTTTGAGAGAAAAGTGGCCGTGAAGAAGGAGGAAACGGTGAGTGGGTGG
TGTTGGACTANGCCCTTTGACGCCGTCAAGTTGGACCGGGTTTTGGGATG
ATGGAAATGGGATATTTAGTGTGCCGCCGTTATCTCCTTGCTTTGGCCAG
TTGGGCGTTTGCTTAATTTGGAAATATTTGACGGCAAAACACTATTTGAT
GACCTGGGAATGAATTATCCACTTGGTTAAATACTTAACCCACGAATGAA
ACTTGTTTAACCCTGCCATGCACCTAAATTTAAAATAAAAAATTGAATTT
CCCAAACAATTGGCTTTTTTTTTTTTTTTTGGAACCCATGTTTTTTAAAA
AAACTTTTTAATTATTTTATTAATTTGTTTTTTTTTTT
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