EY702660

Overview
NameEY702660
Unique NameEY702660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10242 contig Csv1_Contig10242:738..1650. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 2.706e-32
Identity = 63/69 (91.30%), Postives = 66/69 (95.65%), Query Frame = 1 
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 207
            IGF+VFLVHLATIPITGTGINPARSLGAAIIYNKD  WDDHWIFWVGPF+GA LAALYHQ+VIRAIPFK
Sbjct:  216 IGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQIVIRAIPFK 284
[Close]
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.706e-32
Identity = 63/69 (91.30%), Postives = 66/69 (95.65%), Query Frame = 1 
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 207
            IGF+VFLVHLATIPITGTGINPARSLGAAIIYNKD  WDDHWIFWVGPF+GA LAALYHQ+VIRAIPFK
Sbjct:  216 IGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWIFWVGPFIGAALAALYHQIVIRAIPFK 284
[Close]
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.615e-32
Identity = 63/69 (91.30%), Postives = 66/69 (95.65%), Query Frame = 1 
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 207
            IGF+VFLVHLATIPITGTGINPARSLGAAIIYNKD  WDDHWIFWVGPF+GA LAALYHQ+VIRAIPFK
Sbjct:  215 IGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQLVIRAIPFK 283
[Close]
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.343e-31
Identity = 62/69 (89.86%), Postives = 66/69 (95.65%), Query Frame = 1 
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 207
            IGF+VFLVHLATIPITGTGINPARSLGAAIIYNKD  W+DHWIFWVGPFVGA LAA+YHQV+IRAIPFK
Sbjct:  218 IGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWNDHWIFWVGPFVGAALAAIYHQVIIRAIPFK 286
[Close]
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.754e-31
Identity = 62/69 (89.86%), Postives = 65/69 (94.20%), Query Frame = 1 
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 207
            IGF+VFLVHLATIPITGTGINPARSLGAAIIYNKD  WDDHW+FWVGPF+GA LAALYH VVIRAIPFK
Sbjct:  215 IGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFK 283
[Close]
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.754e-31
Identity = 62/69 (89.86%), Postives = 65/69 (94.20%), Query Frame = 1 
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 207
            IGF+VFLVHLATIPITGTGINPARSLGAAIIYNKD  WDDHW+FWVGPF+GA LAALYH VVIRAIPFK
Sbjct:  215 IGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFK 283
[Close]
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.907e-31
Identity = 60/69 (86.96%), Postives = 66/69 (95.65%), Query Frame = 1 
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 207
            IGF+VFLVHLATIPITGTGINPARSLGAAIIYN+D  W+DHWIFWVGPF+GA LAA+YHQV+IRAIPFK
Sbjct:  218 IGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWNDHWIFWVGPFIGAALAAIYHQVIIRAIPFK 286
[Close]
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.103e-31
Identity = 60/69 (86.96%), Postives = 65/69 (94.20%), Query Frame = 1 
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 207
            IGF+VFLVHLATIPITGTGINPARSLGAAIIYN+D  W DHWIFWVGPF+GA LAA+YHQV+IRAIPFK
Sbjct:  221 IGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWSDHWIFWVGPFIGAALAAIYHQVIIRAIPFK 289
[Close]
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 135.191 bits (339), Expect = 5.103e-31
Identity = 61/69 (88.41%), Postives = 65/69 (94.20%), Query Frame = 1 
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 207
            IGF+VFLVHLATIPITGTGINPARSLGAAIIYN+   WDDHWIFWVGPF+GA LAA+YHQVVIRAIPFK
Sbjct:  217 IGFAVFLVHLATIPITGTGINPARSLGAAIIYNRGHAWDDHWIFWVGPFIGAALAAIYHQVVIRAIPFK 285
[Close]
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.664e-31
Identity = 60/69 (86.96%), Postives = 65/69 (94.20%), Query Frame = 1 
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 207
            IGF+VFLVHLATIPITGTGINPARSLGAAII+NKD  WDDHW+FWVGPF+GA LAALYH +VIRAIPFK
Sbjct:  215 IGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDNAWDDHWVFWVGPFIGAALAALYHVIVIRAIPFK 283
The following BLAST results are available for this feature:
BLAST of EY702660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
PIP15_ARATH2.706e-3291.30Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP14_ARATH2.706e-3291.30Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP13_ARATH4.615e-3291.30Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP11_ORYSJ1.343e-3189.86Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP11_VICFA1.754e-3189.86Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH1.754e-3189.86Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP12_MAIZE3.907e-3186.96Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
PIP13_MAIZE5.103e-3186.96Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP12_ORYSJ5.103e-3188.41Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP12_ARATH6.664e-3186.96Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-010-F10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702660 ID=EY702660; Name=EY702660; organism=Citrus sinensis; type=EST; length=913bp
ATTGGGTTCTCTGTGTTTTTGGTTCACTTGGCCACTATCCCAATTACCGG
AACTGGCATCAACCCAGCGAGGAGTCTTGGAGCTGCAATCATCTACAACA
AGGACCGCGGTTGGGATGACCACTGGATTTTCTGGGTGGGACCATTCGTT
GGAGCTGGACTCGCAGCTTTGTACCACCAAGTCGTGATCAGAGCCATTCC
CTTCAAATGAAGCTGATCGCTTCATCAACGTTCGTGATTGCACCTGCATT
TGTTTATGGCTGTTGCTGGCTTGCTTATGTGTATTATAAAATATTAATTA
GTCCTTTGTTCAAATCTGCTGGTGCTGGACCTGGGCCTGCTTCTCTGATT
TCCTTCCTTAAAACGTTTTTTTTTTTTTTTTAATTTTGAAGAGAGGTGGA
TGATGATGACCGATGGGCCCATGGTTAAATAGGTGGGCGCTGTCACTTTG
TACATTTGTATGGCTATGGATTTGTGCAATGCCATCTTGGTTATAATATG
GACAAAACTACTTCTATTTCCAAAATCAATACCCCCCTTATGCTCGGGCC
GCCGATCTAAAGGATCCAAGCCTTTCCTTACCCGATCATGAAACCCTCAT
ACCTTCTCTATTAGGGCCCCTAACTCTCATTTCCTGGCCGGCCTTTTTAA
AACCGCGGGGCCTGGGAAAACCCCTGAGGTTCCCCCAATTATTCCCCCTC
GAACCCCCTCCCCCCTTCTCCCACCTGGCGCTATTAACCAACAAGGCCCC
CCCCGATTCGCCCCCCCCAACAGTTCCCGCATCCTTTCATGGCACATTGT
GAACCCCCCCTTGTTTCGGTCTAATAATCCGCCGATGGGGTGGGTGGTTA
CCACACAGTGTTCAACCCTTTCTTTTCTCCTGCCCCTTCCCCCCGCTTCT
TCCCCTTTTCTCT
back to top