DY305550

Overview
NameDY305550
Unique NameDY305550
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1259
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY305550_ssr221 microsatellite DY305550_ssr221:221..230. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: PLT5_ARATH (Polyol transporter 5 OS=Arabidopsis thaliana GN=PLT5 PE=1 SV=2)

HSP 1 Score: 257.684 bits (657), Expect = 1.066e-67
Identity = 134/222 (60.36%), Postives = 171/222 (77.03%), Query Frame = -3
Query:  211 IIVAARWFSFFPNRHPA*TSLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALFGNFRWVRDSKRERRRN 876
            +++AA    FF        ++  + P  F+ AG+ +  + LLATVAVG VKT+FILVATFLLD+IGRRPLLL+SV GM+ SLA L   L +IDQS KKV+WAV +AI+TV++YVA FSIG GPIT VYSSEI PL+LR+QG+S+GV+VNRVTSGV+S++FL +SKA+T GG+F+LF  IA+VAWVFFY  LPETQG+ LE+M  LF  FRW RDSK + + N
Sbjct:  294 VMIAAIGIHFFQQASGI-DAVVLFSPRIFKTAGLKTDHQQLLATVAVGVVKTSFILVATFLLDRIGRRPLLLTSVGGMVLSLAALGTSLTIIDQSEKKVMWAVVVAIATVMTYVATFSIGAGPITWVYSSEIFPLRLRSQGSSMGVVVNRVTSGVISISFLPMSKAMTTGGAFYLFGGIATVAWVFFYTFLPETQGRMLEDMDELFSGFRW-RDSKSKPKGN 513          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: PLT2_ARATH (Putative polyol transporter 2 OS=Arabidopsis thaliana GN=PLT2 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.337e-59
Identity = 108/191 (56.54%), Postives = 148/191 (77.49%), Query Frame = -3
Query:  250 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVI-WAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALFGNF 819
            ++  Y P  F +AG+ SK++ LLATVAVG VKT FI+V T L+D+ GRR LLL+S+ GM  SL  L   L VID++  + + WA+GLA++TV+++VA FS+G GP+T VY+SEI P++LRAQGAS+GVM+NR+ SG++ MTFLSLSK +TIGG+F LFA +A  AWVFF+  LPET+G  LEE+ +LFG++
Sbjct:  302 AVVLYSPTIFSRAGLKSKNDQLLATVAVGVVKTLFIVVGTCLVDRFGRRALLLTSMGGMFFSLTALGTSLTVIDRNPGQTLKWAIGLAVTTVMTFVATFSLGAGPVTWVYASEIFPVRLRAQGASLGVMLNRLMSGIIGMTFLSLSKGLTIGGAFLLFAGVAVAAWVFFFTFLPETRGVPLEEIESLFGSY 492          

HSP 2 Score: 32.3426 bits (72), Expect = 1.337e-59
Identity = 21/44 (47.73%), Postives = 25/44 (56.82%), Query Frame = -2
Query:  809 TVGRGVWERGCWSVLPRPFCPHHSRSPLVFIFSQQASGIDFVVL 940
            + G+GVW+     V P P   H   + L   FSQQASGID VVL
Sbjct:  264 SAGKGVWKD--LLVRPTPSVRHILIACLGIHFSQQASGIDAVVL 305          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: PLT1_ARATH (Putative polyol transporter 1 OS=Arabidopsis thaliana GN=PLT1 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 1.444e-56
Identity = 109/191 (57.07%), Postives = 147/191 (76.96%), Query Frame = -3
Query:  250 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVI-WAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALFGNF 819
            ++  Y P  F KAG+ SK++ LLATVAVG VKT FI+V T ++D+ GRR LLL+S+ GM  SL  L   L VI+++  + + WA+GLA++TV+++VA FSIG GP+T VY SEI P++LRAQGAS+GVM+NR+ SG++ MTFLSLSK +TIGG+F LFA +A+ AWVFF+  LPET+G  LEEM  LFG++
Sbjct:  302 AVVLYSPTIFSKAGLKSKNDQLLATVAVGVVKTLFIVVGTCVVDRFGRRALLLTSMGGMFLSLTALGTSLTVINRNPGQTLKWAIGLAVTTVMTFVATFSIGAGPVTWVYCSEIFPVRLRAQGASLGVMLNRLMSGIIGMTFLSLSKGLTIGGAFLLFAGVAAAAWVFFFTFLPETRGIPLEEMETLFGSY 492          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: PLT6_ARATH (Probable polyol transporter 6 OS=Arabidopsis thaliana GN=PLT6 PE=2 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 3.216e-56
Identity = 115/205 (56.10%), Postives = 147/205 (71.71%), Query Frame = -3
Query:  205 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALFGNFRWVRDSKRERRRNKA 819
            ++  Y P  F+KAGIT+KD+  L T+ VG +KTTFI  AT LLDK+GRR LLL+SV GM+ +L  L   L +   +  K+ WA+ L+I    S+VAFFSIG+GPIT VYSSE+ PLKLRAQGAS+GV VNRV +  VSM+FLSL+ AIT GG+FF+FA +A+VAW FF+  LPET+GK+LEE+ ALF      RD  + R  N A
Sbjct:  293 AVLLYGPRIFKKAGITTKDKLFLVTIGVGIMKTTFIFTATLLLDKVGRRKLLLTSVGGMVIALTMLGFGLTMAQNAGGKLAWALVLSIVAAYSFVAFFSIGLGPITWVYSSEVFPLKLRAQGASLGVAVNRVMNATVSMSFLSLTSAITTGGAFFMFAGVAAVAWNFFFFLLPETKGKSLEEIEALF-----QRDGDKVRGENGA 492          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: PLT3_ARATH (Probable polyol transporter 3 OS=Arabidopsis thaliana GN=PLT3 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 2.085e-55
Identity = 115/207 (55.56%), Postives = 150/207 (72.46%), Query Frame = -3
Query:  256 IIVAARWFSFFPNRHPA*TSLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALFG 876
            I++AA    FF +      ++  Y P  F+KAG+ SKD+ LLATV VG  K  FI++ATFLLDK+GRR LLL+S  GM+ +L +LA+ L ++ Q   ++ WA+ L+I +  ++VAFFSIG+GPIT VYSSEI PL+LRAQGASIGV VNR+ +  VSM+FLS++KAIT GG FF+FA IA  AW FF+  LPET+G  LEEM  LFG
Sbjct:  280 ILIAAVGIHFFEHATGI-EAVVLYSPRIFKKAGVVSKDKLLLATVGVGLTKAFFIIIATFLLDKVGRRKLLLTSTGGMVFALTSLAVSLTMV-QRFGRLAWALSLSIVSTYAFVAFFSIGLGPITWVYSSEIFPLRLRAQGASIGVAVNRIMNATVSMSFLSMTKAITTGGVFFVFAGIAVAAWWFFFFMLPETKGLPLEEMEKLFG 484          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: PLT4_ARATH (Probable polyol transporter 4 OS=Arabidopsis thaliana GN=PLT4 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.451e-40
Identity = 87/184 (47.28%), Postives = 126/184 (68.48%), Query Frame = -3
Query:  259 FYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 810
            +Y P   ++AGI  + + L ATVAVG  KT FIL ATFL+D +GR+PLL  S  GM   L  L+  L  + Q        + LA+  V   VAFFSIGMGP+  V +SEI PL+LRAQ +++G + NRV SG+V+M+FLS+S+AIT+GG+FF+F+ +++++ +F Y  +PET GK+LE++  +F
Sbjct:  321 YYSPEILKEAGIQDETKLLAATVAVGVTKTVFILFATFLIDSVGRKPLLYVSTIGMTLCLFCLSFTLTFLGQG----TLGITLALLFVCGNVAFFSIGMGPVCWVLTSEIFPLRLRAQASALGAVGNRVCSGLVAMSFLSVSRAITVGGTFFVFSLVSALSVIFVYVLVPETSGKSLEQIELMF 500          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: ERDL6_ARATH (Sugar transporter ERD6-like 6 OS=Arabidopsis thaliana GN=At1g75220 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.748e-23
Identity = 69/189 (36.51%), Postives = 104/189 (55.03%), Query Frame = -3
Query:  259 LFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAV---IDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 816
            + FY    FE AG+TS +    AT  VG ++     ++T+L+DK GRR LL  S  GM  SL  +A    +   +        W   L++  V++ V FFS+GMGPI  +  SEILP+ ++    SI  + N   S +++MT  +L  A + GG+F L+  + +   VF    +PET+GKTLEE+ +LF
Sbjct:  302 VLFYSSTIFESAGVTSSNA---ATFGVGAIQVVATAISTWLVDKAGRRLLLTISSVGMTISLVIVAAAFYLKEFVSPDSDMYSWLSILSVVGVVAMVVFFSLGMGPIPWLIMSEILPVNIKGLAGSIATLANWFFSWLITMT-ANLLLAWSSGGTFTLYGLVCAFTVVFVTLWVPETKGKTLEELQSLF 486          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: EDL16_ARATH (Sugar transporter ERD6-like 16 OS=Arabidopsis thaliana GN=At5g18840 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 3.589e-23
Identity = 68/182 (37.36%), Postives = 100/182 (54.95%), Query Frame = -3
Query:  265 FYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGA 810
            FY    F KAG TS     L T+A+  V+    ++ T L+DK GRRPL++ S  G+            +  QS   + W   LA+  VL YVA FSIGMGP+  V  SEI P+ ++    S+ V+VN   +  VS TF +   + +  G+F+L+++ A+   +F    +PET+GKTLEE+ A
Sbjct:  300 FYASETFVKAGFTS---GKLGTIAIACVQVPITVLGTILIDKSGRRPLIMISAGGIFLGCILTGTSFLLKGQS-LLLEWVPSLAVGGVLIYVAAFSIGMGPVPWVIMSEIFPINVKGIAGSLVVLVNWSGAWAVSYTF-NFLMSWSSPGTFYLYSAFAAATIIFVAKMVPETKGKTLEEIQA 476          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: XYLL1_ARATH (D-xylose-proton symporter-like 1 OS=Arabidopsis thaliana GN=At3g03090 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 6.123e-23
Identity = 63/185 (34.05%), Postives = 101/185 (54.59%), Query Frame = -3
Query:  265 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGA 819
            S+ +Y P   + AG ++  +    ++ +G +K     V+  ++D++GRRPLLL  V+GM+ SL  L  +       +K V     +A++ +L YV  + +  GPI  +  SEI PLKLR +G S+ V+VN   + +V+  F  L + +  G  F  F  I  V+  F Y  +PET+G TLEE+ A
Sbjct:  323 SVLYYAPSILQTAGFSAAADATRISILLGLLKLVMTGVSVIVIDRVGRRPLLLCGVSGMVISLFLLGSYYMF----YKNV---PAVAVAALLLYVGCYQLSFGPIGWLMISEIFPLKLRGRGISLAVLVNFGANALVTFAFSPLKELLGAGILFCAFGVICVVSLFFIYYIVPETKGLTLEEIEA 500          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: XYLL2_ARATH (D-xylose-proton symporter-like 2 OS=Arabidopsis thaliana GN=At5g17010 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.781e-22
Identity = 69/219 (31.51%), Postives = 110/219 (50.23%), Query Frame = -3
Query:  265 KEVV-GPFFPGRFVPIIVAARWFSFFPNRHPA*TSLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGA 918
            KEV  G  F G+ +  ++       F  +     S+ +Y P   + AG ++  +    ++ +G +K     VA  ++D++GRRPLLL  V GM+ SL  L  +      S         +A+  +L YV  + +  GPI  +  SEI PLKLR +G S+ V+VN   + +V+  F  L + +  G  F  F  I  ++ VF +  +PET+G TLEE+ A
Sbjct:  290 KEVTFGELFQGKCLKALIIGGGLVLF-QQITGQPSVLYYAPSILQTAGFSAAGDATRVSILLGLLKLIMTGVAVVVIDRLGRRPLLLGGVGGMVVSLFLLGSYYLFFSASPV-------VAVVALLLYVGCYQLSFGPIGWLMISEIFPLKLRGRGLSLAVLVNFGANALVTFAFSPLKELLGAGILFCGFGVICVLSLVFIFFIVPETKGLTLEEIEA 500          
The following BLAST results are available for this feature:
BLAST of DY305550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
PLT5_ARATH1.066e-6760.36Polyol transporter 5 OS=Arabidopsis thaliana GN=PL... [more]
PLT2_ARATH1.337e-5956.54Putative polyol transporter 2 OS=Arabidopsis thali... [more]
PLT1_ARATH1.444e-5657.07Putative polyol transporter 1 OS=Arabidopsis thali... [more]
PLT6_ARATH3.216e-5656.10Probable polyol transporter 6 OS=Arabidopsis thali... [more]
PLT3_ARATH2.085e-5555.56Probable polyol transporter 3 OS=Arabidopsis thali... [more]
PLT4_ARATH1.451e-4047.28Probable polyol transporter 4 OS=Arabidopsis thali... [more]
ERDL6_ARATH2.748e-2336.51Sugar transporter ERD6-like 6 OS=Arabidopsis thali... [more]
EDL16_ARATH3.589e-2337.36Sugar transporter ERD6-like 16 OS=Arabidopsis thal... [more]
XYLL1_ARATH6.123e-2334.05D-xylose-proton symporter-like 1 OS=Arabidopsis th... [more]
XYLL2_ARATH1.781e-2231.51D-xylose-proton symporter-like 2 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1BF05RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305550 ID=DY305550; Name=DY305550; organism=Citrus sinensis; type=EST; length=1259bp
GATTCATAATGCTTCATTTTCATTGCATAATGACTTCTTCAATCCCCCAT
TAGTGATCACCCCGCACACACCGCGACACAGTATTCATTTTAAAAAGCTA
TACCAAGATTTTAAAAACCATCGTATTTAATAAAATACCCTTCAGTTACC
GTTAGAAACCGGTCCTAACTGAACGTTACTCGCACCGTCACCGTTAATCC
CGTTGGCTTTGTTCCTCCTCCTCTCTCTCTTGGAATCCCTCACCCAACGG
AAATTACCAAAAAGCGCCCCCATCTCTTCAAGGGTTTTACCCTGCGTTTC
GGGGAGACACGGGTAAAAAAACACCCACGCAACTGATGCAATTGACGCGA
ATAAAAAGAAGGAGCCGCCAATCGTGATCGCTTTACTAAGCGATAGGAAA
GTCATCGATACAACCCCACTTGTGACCCTGTTCACCATCACCCCGATACT
CGCTCCCTGAGCGCGTAACTTCAACGGCAAAATCTCTGAACTGTAAACCA
TCGTGATGGGCCCCATCCCGATTGAGAAAAACGCCACGTAGGATAAAACC
GTTGAAATGGCCAAACCAACGGCCCAAATCACCTTTTTGTGTGACTGATC
GATGACTGCAAGAAAGATAGCAAGGGTCGCGAGCGAAGCGATCATGCCCG
CAACACTGCTCAAAAGCAACGGACGCCGTCCGATTTTGTCGAGTAAAAAC
GTAGCCACTAGGATGAAAGTGGTCTTGACAAATCCAACGGCTACAGTAGC
AAGTAAATTTTCGTCTTTTGACGTAATCCCAGCTTTTTCAAAGAATCCAG
GAATGTAAAAGAACAACGAAGTCTATGCCGGATGCCTGTTGGGAAAAAAT
GAAAACCAACGGGCTGCGACTATGATGGGGACAAAACGGCCGGGGAAGAA
CGGACCAACAACCTCTTTCCCAAACACCCCTCCCCACGGTGGAATTTTCG
GACATGAAAAAAAACCTCCCCTTGCCTTCTTCCAGAAAGGCCGGCGGGCT
TTTTTAAAACCGGAAAACTGAAACAAAAAAACCCCCCCTTTCAGCCCCAA
AAGTTTTTGCGAAAAAAATTTCTTTTGGTCCCGGCAAAATCCCCCCCTGG
TCCCCACCCCCCACCCGCGGGAAAAAAATTTGGGGGGGGGGGGAAAGCCC
CGCCCCAAGAGGGGGGGAAAAAAAAACAAAAGAGAGAGAAGGGGCGCCCC
AAAAAACTCCAAAAACACCATCACGGGCCCCCCCCCCCCCACACCAAGAT
AAAAGGAAG
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