DY305546

Overview
NameDY305546
Unique NameDY305546
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1115
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY305546_ssr832 microsatellite DY305546_ssr832:832..843. BLAST: Citrus ESTs to Prunus persica proteins V1
DY305546_ssr17 microsatellite DY305546_ssr17:17..28. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY305546 vs. ExPASy Swiss-Prot
Match: SET_DROME (Protein SET OS=Drosophila melanogaster GN=Set PE=1 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 8.851e-47
Identity = 90/200 (45.00%), Postives = 138/200 (69.00%), Query Frame = 1
Query:  163 SIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDNKLTKTF----TFLDDDGSMKI-TATSIKWKEGMGIPNGVNHEKKGNKRPLAEE--SFFTWFSDTQEKDTIDGIQDEVAEIIKEDLWPNPLTYF 741
            ++E++   Q+E++ +NE+ASE++L+VEQKY+++RKP Y+KR++++K IP+FW+T+FI+HP +  +L EE+++    L+ LEVE+F+D+KSGY I F+F  NPYFE+  LTK F        ++G     T+T IKWKEG  +   +  +  GNK+    E  +FF WFS     D  D + DE+AE+IK+DLWPNPL Y+
Sbjct:   32 ALEQIDACQNEIDALNEKASEEILKVEQKYNKLRKPCYEKRSELVKRIPNFWVTSFINHPQVSGILDEEEEECLHALNKLEVEEFEDIKSGYRINFHFDENPYFENKVLTKEFHLNSAAASENGDWPASTSTPIKWKEGKNLLKLLLTKPYGNKKKRNSEYKTFFDWFS-----DNTDPVNDEIAELIKDDLWPNPLQYY 226          
BLAST of DY305546 vs. ExPASy Swiss-Prot
Match: SET_HUMAN (Protein SET OS=Homo sapiens GN=SET PE=1 SV=3)

HSP 1 Score: 187.578 bits (475), Expect = 1.156e-46
Identity = 94/219 (42.92%), Postives = 140/219 (63.93%), Query Frame = 1
Query:   94 ADKGKKTKVEEENAEQIDSELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDNKLTKTFTFLDDDGSMKITATSIKWKEGMGIP--NGVNHEKKGNKRPLAE-ESFFTWFSDTQEKDTIDGIQDEVAEIIKEDLWPNPLTYF 741
            A  G   K E+E  E        +IE + E+Q+E++++NE+ASE++L+VEQKY+++R+P + KR+++I  IP+FW+T F++HP +  LL EED++   YL+ +EV +F+D+KSGY I F F  NPYFE+  L+K F  L++ G     +T IKWK G  +   +     K   KR   E ESFFTWF+D       D   DE+ E+IK+D+WPNPL Y+
Sbjct:   29 ASAGLPKKGEKEQQE--------AIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEF-HLNESGDPSSKSTEIKWKSGKDLTKRSSQTQNKASRKRQHEEPESFFTWFTDHS-----DAGADELGEVIKDDIWPNPLQYY 233          
BLAST of DY305546 vs. ExPASy Swiss-Prot
Match: SET_RAT (Protein SET OS=Rattus norvegicus GN=Set PE=1 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 1.972e-46
Identity = 92/216 (42.59%), Postives = 143/216 (66.20%), Query Frame = 1
Query:  115 KVEEENAE----QIDSELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDNKLTKTFTFLDDDGSMKITATSIKWKEGMGIP--NGVNHEKKGNKRPLAE-ESFFTWFSDTQEKDTIDGIQDEVAEIIKEDLWPNPLTYF 741
            K+E+++A     + + E   +IE + E+Q+E++++NE+ASE++L+VEQKY+++R+P + KR+++I  IP+FW+T F++HP +  LL EED++   YL+ +EV +F+D+KSGY I F F  NPYFE+  L+K F  L++ G     +T IKWK G  +   +     K   KR   E ESFFTWF+D       D   DE+ E+IK+D+WPNPL Y+
Sbjct:   23 KLEDKSASPGLPKGEKEQQEAIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEF-HLNESGDPSSKSTEIKWKSGKDLTKRSSQTQNKASRKRQHEEPESFFTWFTDHS-----DAGADELGEVIKDDIWPNPLQYY 232          
BLAST of DY305546 vs. ExPASy Swiss-Prot
Match: SET_MOUSE (Protein SET OS=Mus musculus GN=Set PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.972e-46
Identity = 92/216 (42.59%), Postives = 143/216 (66.20%), Query Frame = 1
Query:  115 KVEEENAE----QIDSELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDNKLTKTFTFLDDDGSMKITATSIKWKEGMGIP--NGVNHEKKGNKRPLAE-ESFFTWFSDTQEKDTIDGIQDEVAEIIKEDLWPNPLTYF 741
            K+E+++A     + + E   +IE + E+Q+E++++NE+ASE++L+VEQKY+++R+P + KR+++I  IP+FW+T F++HP +  LL EED++   YL+ +EV +F+D+KSGY I F F  NPYFE+  L+K F  L++ G     +T IKWK G  +   +     K   KR   E ESFFTWF+D       D   DE+ E+IK+D+WPNPL Y+
Sbjct:   23 KLEDKSASPGLPKGEKEQQEAIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEF-HLNESGDPSSKSTEIKWKSGKDLTKRSSQTQNKASRKRQHEEPESFFTWFTDHS-----DAGADELGEVIKDDIWPNPLQYY 232          
BLAST of DY305546 vs. ExPASy Swiss-Prot
Match: TSYL2_HUMAN (Testis-specific Y-encoded-like protein 2 OS=Homo sapiens GN=TSPYL2 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.241e-32
Identity = 75/212 (35.38%), Postives = 125/212 (58.96%), Query Frame = 1
Query:  106 KKTKVEEENAEQIDSELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDNKLTKTFTFLDDDGSMKITATSIKWKEGMGIPNGVNHEKKGNKRPLAEESFFTWFSDTQEKDTIDGIQDEVAEIIKEDLWPNPLTYF 741
            K+ KV+ E+ E+    +   ++ L++IQ +LE +N +A +  L +++K+ ++R+P  ++R+ II+ IP FW+ AF++HP +  L++  D+ IFRYL++L+V+D + +  GY +   F  NPYF +  + K F   +  G +   +T I+W  G   P    H   GN+   A  SFF+WFS+    +      D +AEIIK DLW NPL Y+
Sbjct:  196 KQRKVKRESRERNAERMESILQALEDIQLDLEAVNIKAGKAFLRLKRKFIQMRRPFLERRDLIIQHIPGFWVKAFLNHPRISILINRRDEDIFRYLTNLQVQDLRHISMGYKMKLYFQTNPYFTNMVIVKEFQ-RNRSGRLVSHSTPIRWHRGQE-PQARRH---GNQD--ASHSFFSWFSNHSLPEA-----DRIAEIIKNDLWVNPLRYY 395          
BLAST of DY305546 vs. ExPASy Swiss-Prot
Match: TSYL2_MACFA (Testis-specific Y-encoded-like protein 2 OS=Macaca fascicularis GN=TSPYL2 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 4.715e-32
Identity = 74/212 (34.91%), Postives = 125/212 (58.96%), Query Frame = 1
Query:  106 KKTKVEEENAEQIDSELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDNKLTKTFTFLDDDGSMKITATSIKWKEGMGIPNGVNHEKKGNKRPLAEESFFTWFSDTQEKDTIDGIQDEVAEIIKEDLWPNPLTYF 741
            K+ KV+ E+ ++    +   ++ L++IQ +LE +N +A +  L +++K+ ++R+P  ++R+ II+ IP FW+ AF++HP +  L++  D+ IFRYL++L+V+D + +  GY +   F  NPYF +  + K F   +  G +   +T I+W  G   P    H   GN+   A  SFF+WFS+    +      D +AEIIK DLW NPL Y+
Sbjct:  196 KQRKVKRESRQRNAERMESILQALEDIQLDLEAVNIKAGKAFLRLKRKFIQMRRPFLERRDLIIQHIPGFWVKAFLNHPRIPILINRRDEDIFRYLTNLQVQDLRHISMGYKMKLYFQTNPYFTNMVIVKEFQ-RNRSGRLVSHSTPIRWHRGQE-PQARRH---GNQD--ASHSFFSWFSNHSLPEA-----DRIAEIIKNDLWVNPLRYY 395          
BLAST of DY305546 vs. ExPASy Swiss-Prot
Match: TSYL4_HUMAN (Testis-specific Y-encoded-like protein 4 OS=Homo sapiens GN=TSPYL4 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 2.340e-31
Identity = 78/225 (34.67%), Postives = 123/225 (54.67%), Query Frame = 1
Query:   73 ATKSKMVADKGKKTK--VEEENAEQIDSELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDNKLTKTFTFLDDDGSMKITATSIKWKEGMGIPNGVNHEKKGNKRPLAEESFFTWFSDTQEKDTIDGIQDEVAEIIKEDLWPNPLTYF 741
            A + K V  K KK    V+EE   +   ++   ++ L+ I  EL  +N +A    L++E+K+  +R+    +R+ II++IP FW+TAF +HP L  ++S +D+ + RY+ +LEVE+ K  ++G    F F  NPYF +  L K +      G +   +T I+W  G      ++  ++GN  P    SFF WFSD    +      D +AEIIK +LWPNPL Y+
Sbjct:  172 AMEEKKVVQKEKKVAGGVKEETRPRAP-KINNCMDSLEAIDQELSNVNAQADRAFLQLERKFGRMRRLHMQRRSFIIQNIPGFWVTAFRNHPQLSPMISGQDEDMLRYMINLEVEELKHPRAGCKFKFIFQGNPYFRNEGLVKEYE-RRSSGRVVSLSTPIRWHRGQDPQAHIHRNREGNTIP----SFFNWFSDHSLLEF-----DRIAEIIKGELWPNPLQYY 385          
BLAST of DY305546 vs. ExPASy Swiss-Prot
Match: TSYL2_MOUSE (Testis-specific Y-encoded-like protein 2 OS=Mus musculus GN=Tspyl2 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.340e-31
Identity = 70/212 (33.02%), Postives = 121/212 (57.08%), Query Frame = 1
Query:  106 KKTKVEEENAEQIDSELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDNKLTKTFTFLDDDGSMKITATSIKWKEGMGIPNGVNHEKKGNKRPLAEESFFTWFSDTQEKDTIDGIQDEVAEIIKEDLWPNPLTYF 741
            +K +  +E+ E+    +   ++ L+ IQ +LE +N +A +  L +++K+ ++R+P  ++R+ II+ IP FW+ AF++HP +  L+++ D+ IFRYL++L+V+D + +  GY +   F  NPYF +  + K F   +  G +   +T I+W  G   P   N      +     ESFF WFS+    +      D +AEIIK DLW NP+ Y+
Sbjct:  189 RKQRKAKESRERSAQRMESILQALESIQMDLEAVNIKAGKAFLRLKRKFIQMRRPFLERRDLIIQHIPGFWVKAFLNHPRISILINQRDRDIFRYLTNLQVQDLRHISMGYKMKLYFQTNPYFTNMVIVKEFQ-RNRSGRLVSHSTPIRWHRGQE-PQAYNRRSHDTR-----ESFFNWFSNHSLPEA-----DRIAEIIKNDLWVNPVRYY 388          
BLAST of DY305546 vs. ExPASy Swiss-Prot
Match: TSYL6_HUMAN (Testis-specific Y-encoded-like protein 6 OS=Homo sapiens GN=TSPYL6 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 5.213e-31
Identity = 72/194 (37.11%), Postives = 114/194 (58.76%), Query Frame = 1
Query:  160 LSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDNKLTKTFTFLDDDGSMKITATSIKWKEGMGIPNGVNHEKKGNKRPLAEESFFTWFSDTQEKDTIDGIQDEVAEIIKEDLWPNPLTYF 741
            L +  L+ IQ EL+ +N EA   +L+VE+++ +I +   ++RNDII++IP FW+TAF  HP L  ++  +D ++  YL++LEV++ +  ++G    F F  NPYF +  + K +  +   G +   +T I W+ G G P    H    N+  +   SFFTWFSD    ++     D +A+IIKEDLW NPL Y+
Sbjct:  200 LHLNPLESIQLELDSVNAEADRALLQVERRFGQIHEYYLEQRNDIIRNIPGFWVTAFRHHPQLSAMIRGQDAEMLSYLTNLEVKELRHPRTGCKFKFFFQRNPYFRNKLIVKVYE-VRSFGQVVSFSTLIMWRRGHG-PQSFIHR---NRHVIC--SFFTWFSDHSLPES-----DRIAQIIKEDLWSNPLQYY 381          
BLAST of DY305546 vs. ExPASy Swiss-Prot
Match: TSYL1_PONAB (Testis-specific Y-encoded-like protein 1 OS=Pongo abelii GN=TSPYL1 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 9.832e-30
Identity = 74/217 (34.10%), Postives = 123/217 (56.68%), Query Frame = 1
Query:  106 KKTKVEEENAEQIDS---ELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDNKLTKTFTFLDDDGSMKITATSIKWKEGMGIPNGVNHEKKGNKRPLAEE--SFFTWFSDTQEKDTIDGIQDEVAEIIKEDLWPNPLTYF 741
            ++ ++EEE  E+         L ++ L+ IQ EL+ +N +A     ++E K+  +R+   ++RN II++IP FW+TAF +HP L  ++  +D ++ RY+++LEV++ +  ++G    F F  NPYF +  + K +  +   G +   +T I W+ G        HE +   R   +   SFFTWFSD    ++     D++AEIIKEDLWPNPL Y+
Sbjct:  207 EEDRLEEEAREEEGPWPLHEALRMDPLEAIQLELDTVNAQADRAFQQLEHKFGRMRRHYLERRNYIIQNIPGFWMTAFRNHPQLSAMIRGQDAEMLRYITNLEVKELRHPRTGCKFKFFFRRNPYFRNKLIVKEYE-VRSSGRVVSLSTPIIWRRG--------HEPQSFIRRNQDLICSFFTWFSDHSLPES-----DKIAEIIKEDLWPNPLQYY 409          
The following BLAST results are available for this feature:
BLAST of DY305546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
SET_DROME8.851e-4745.00Protein SET OS=Drosophila melanogaster GN=Set PE=1... [more]
SET_HUMAN1.156e-4642.92Protein SET OS=Homo sapiens GN=SET PE=1 SV=3[more]
SET_RAT1.972e-4642.59Protein SET OS=Rattus norvegicus GN=Set PE=1 SV=2[more]
SET_MOUSE1.972e-4642.59Protein SET OS=Mus musculus GN=Set PE=1 SV=1[more]
TSYL2_HUMAN1.241e-3235.38Testis-specific Y-encoded-like protein 2 OS=Homo s... [more]
TSYL2_MACFA4.715e-3234.91Testis-specific Y-encoded-like protein 2 OS=Macaca... [more]
TSYL4_HUMAN2.340e-3134.67Testis-specific Y-encoded-like protein 4 OS=Homo s... [more]
TSYL2_MOUSE2.340e-3133.02Testis-specific Y-encoded-like protein 2 OS=Mus mu... [more]
TSYL6_HUMAN5.213e-3137.11Testis-specific Y-encoded-like protein 6 OS=Homo s... [more]
TSYL1_PONAB9.832e-3034.10Testis-specific Y-encoded-like protein 1 OS=Pongo ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1BE10RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305546 ID=DY305546; Name=DY305546; organism=Citrus sinensis; type=EST; length=1115bp
GGTTTTAGGCACTCGTCGAGCGAGCGAGTTAGGGTTATTTAATTTTTATT
TTATTTGTTTGTTATTTTAATAGCTACCAAGAGCAAAATGGTGGCAGACA
AGGGCAAAAAAACCAAAGTTGAAGAAGAAAACGCAGAGCAAATTGACTCA
GAACTTGTTCTTTCCATCGAGAAACTCCAAGAGATCCAAGACGAGCTTGA
AAAGATTAACGAAGAGGCAAGCGAGAAAGTCTTGGAGGTTGAGCAGAAAT
ACAGTGAGATACGCAAGCCAGTCTATGATAAGCGAAATGATATCATCAAA
TCCATACCTGACTTCTGGTTAACTGCCTTTATTAGTCATCCTGCTCTCGG
TGAACTTTTGAGTGAAGAGGATCAGAAGATATTCAGGTACTTGAGCTCTC
TGGAAGTGGAGGATTTTAAAGATGTCAAATCAGGATACTCCATCACATTT
AACTTCTCCCCCAATCCCTATTTTGAAGATAACAAACTTACCAAGACTTT
CACCTTCCTTGATGATGATGGTTCAATGAAAATTACTGCTACATCAATCA
AGTGGAAAGAGGGCATGGGCATACCAAATGGAGTTAATCATGAGAAGAAA
GGAAACAAGCGGCCATTGGCGGAAGAAAGCTTCTTTACCTGGTTCAGTGA
TACCCAAGAGAAGGATACTATTGATGGTATCCAAGATGAGGTTGCAGAGA
TTATCAAGGAGGATTTATGGCCCAATCCTCTCACTTATTTTAACAATGAA
GCTGATGAAGAGGAGTTTGAAGGCGATGAAGAGGGTAAAGAAGATGATGA
CTCTGAAGATGATGAAGATGATCAAGAGGAAGATGATGATGATGAAGACG
GTGATGATGAAGGCAACTGAGTTATCTTCATCCTAATCCGATATCAGCTT
ATGTTAAATGTCCTTGCTTCGGTAAACTTTGGTGTAAAGTGGTTTTCTGT
GGTTTGCTCAGTAGGGTGACAAGGGAAGGGCAACCACTTCAACTCTTATG
AATACCTTTTTTGGCTAGTGGGAAGGCCACCGAACGAAATCGGTTTCCTT
TTATTTTAGGGCCCTTTTCCGGGGTTCCCGGGGGTTTAATTTTGGGAGAT
TTCCCCCCCTTATCT
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