DY305526

Overview
NameDY305526
Unique NameDY305526
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1265
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY305526 vs. ExPASy Swiss-Prot
Match: C72A1_CATRO (Secologanin synthase OS=Catharanthus roseus GN=CYP72A1 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 8.475e-67
Identity = 77/168 (45.83%), Postives = 115/168 (68.45%), Query Frame = 1 
Query:    4 EMELPLKSIALTIVIVTVLTWAWRVLNWVWLRPKKLEKFLRQQGLKGNSYRLLFGDLKENSIELKEAKARPLSLDDDIAIRVNPFLHKLVNDYGKNSFMWFGPTPRVNIMNPDKIKEIFTRINDFQKVNSI--PLARLLIVGLATLEGEKWAKHRKLINPAFHQEKLK 501
            +M+   K+IA TI  + V+ WAWRVL+W W  PK++EK LRQQG +GN YR L GD+KE+    +EA ++P+  ++DI  R+ P ++  +N YG+NSF W G  PR+++M P+ IKE+ T  + +QK   +  PL + L+ G+ + EG KW+KHR++I+PAF  EKLK
Sbjct:    4 DMDTIRKAIAATIFAL-VMAWAWRVLDWAWFTPKRIEKRLRQQGFRGNPYRFLVGDVKESGKMHQEALSKPMEFNNDIVPRLMPHINHTINTYGRNSFTWMGRIPRIHVMEPELIKEVLTHSSKYQKNFDVHNPLVKFLLTGVGSFEGAKWSKHRRIISPAFTLEKLK 170

HSP 2 Score: 108.612 bits (270), Expect = 8.475e-67
Identity = 58/137 (42.34%), Postives = 87/137 (63.50%), Query Frame = 2 
Query:  620 EIITKWEKQMSVEGSSDLDVWPYLANLTSDVISRTAFGSNYEEGRRIFQLQAELAELTMQVFRSVHIPGWRFLPYKKNRKMKKLAKEFRPP*WESSKIGKKELKQGKPRIMNLLG*LVENRF*KNLKTMENNKNVGV 1030
            +++TKWEK    +GS ++D++P    LTSDVIS+ AFGS YEEG +IF+L  EL +LT+   R V+IPGW +LP K+N++MK++ KE             K LK G+P   +LLG L+E+   + ++   N K+ G+
Sbjct:  182 DMLTKWEKIAEKQGSHEVDIFPTFDVLTSDVISKVAFGSTYEEGGKIFRLLKELMDLTIDCMRDVYIPGWSYLPTKRNKRMKEINKEITDMLRFIINKRMKALKAGEPGEDDLLGVLLESNI-QEIQKQGNKKDGGM 317
The following BLAST results are available for this feature:
BLAST of DY305526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
C72A1_CATRO8.475e-6745.83Secologanin synthase OS=Catharanthus roseus GN=CYP... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM1BC04RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305526 ID=DY305526; Name=DY305526; organism=Citrus sinensis; type=EST; length=1265bp
GGTGAAATGGAGTTGCCTCTGAAATCCATAGCTTTGACCATTGTTATTGT
AACGGTGCTAACATGGGCATGGAGAGTGCTGAACTGGGTGTGGCTGAGGC
CCAAGAAGCTGGAGAAATTCCTGAGACAGCAAGGTTTAAAAGGCAATTCT
TACAGGCTTCTGTTTGGTGACTTGAAAGAAAATTCCATCGAGTTGAAGGA
AGCAAAAGCCAGACCCCTCAGTTTGGATGACGATATTGCTATTCGTGTCA
ATCCATTCCTTCATAAACTGGTAAATGATTATGGTAAGAATTCTTTCATG
TGGTTTGGTCCGACACCAAGGGTGAATATTATGAATCCTGATAAAATAAA
AGAGATATTTACCAGGATCAATGATTTTCAAAAAGTCAATTCAATCCCAC
TTGCCAGGCTGCTGATAGTTGGATTGGCTACCCTTGAGGGGGAGAAGTGG
GCTAAACATAGAAAACTCATCAACCCAGCCTTCCACCAAGAGAAGCTCAA
GGTTTATTAATTAACTTCTCCATTTGTTTACATATCTTTGGAAGATTCGA
TTTTGCCCACATTTAGATTTCTTGCTTTTGTTACAGCTTATGTTGCCAGC
ATTCTACTTGAGTTGTATCGAAATAATTACAAAGTGGGAGAAGCAAATGT
CTGTAGAAGGATCATCTGACTTGGATGTATGGCCTTATCTTGCAAATTTG
ACAAGTGATGTGATTTCTCGAACGGCTTTTGGGAGTAATTATGAAGAAGG
AAGAAGGATTTTTCAGCTCCAGGCAGAGCTAGCTGAACTCACAATGCAAG
TCTTTCGTTCAGTTCACATTCCAGGATGGAGGTTTTTACCCTACAAGAAA
AATAGGAAAATGAAAAAATTGGCCAAGGAATTCCGGCCTCCTTGATGGGA
ATCATCAAAAATAGGGAAAAAGGAATTAAAGCAGGGGAAACCTCGCATTA
TGAACTTGTTAGGCTAACTGGTTGAAAACCGTTTTTAAAAAAATTTAAAA
ACAATGGAAAATAACAAAAATGTTGGGGTTCCCCCTGAAACAATTTTATT
CAAAAAAGTTATACCATTTTTTTTTTGTCCCCCCAAAAAAAAAACCCCTT
GTTTTTCTTTTATTTGAAAAATAGGTTTTTTTTTGGCCACAACACTCAGA
ATATGGCAAAAAAAATATGCCAAAGGCAAAAAGGGTTTTTTGCCCGGTGT
TTTTTGGAAAATAAAAAACCCCCCCCAAATAAATAAAAAAGGAATATTTT
AAAAACCCACCTCCC
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