DY305519

Overview
NameDY305519
Unique NameDY305519
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1144
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305519 vs. ExPASy Swiss-Prot
Match: FRI3_SOYBN (Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 2.463e-76
Identity = 144/217 (66.36%), Postives = 164/217 (75.58%), Query Frame = 2
Query:  197 RSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLKMVGKGHGVWHFNQMLLHKGDAA 847
            ++L   A  D N+ PLTGVVF+PFEEVKKE            ARQKY D+CEA INEQINVEYNVSYVYHA++AYFDRDN+AL+GL                  MEYQN RGGKVKL SI+ P SEFDH EKGDALYAMELALSLEKLTNEKLL+L SVA +NND Q+ DF+ESEFLGEQVEAI KI++YV+QL+ VGKGHGVWHF+QMLLH+   A
Sbjct:   39 KNLVPCATKDTNNRPLTGVVFEPFEEVKKELDLVPTVPQASLARQKYTDDCEATINEQINVEYNVSYVYHAMFAYFDRDNVALKGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSEFDHEEKGDALYAMELALSLEKLTNEKLLNLHSVASKNNDVQLADFIESEFLGEQVEAIKKISEYVAQLRRVGKGHGVWHFDQMLLHEEGVA 255          
BLAST of DY305519 vs. ExPASy Swiss-Prot
Match: FRI1_ARATH (Ferritin-1, chloroplastic OS=Arabidopsis thaliana GN=FER1 PE=1 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.765e-74
Identity = 146/239 (61.09%), Postives = 174/239 (72.80%), Query Frame = 2
Query:  119 LTTGSSCYSKSNASLVKLGGILPRTKRSLKVSAA-VDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLKMVGKGHGVWHFNQMLLH 832
            L  GS+  S S     K+GG      R++ V+AA VD N+MP+TGVVFQPFEEVKK             ARQ++ D  EA INEQINVEYNVSYVYH++YAYFDRDN+A++GL                  MEYQN RGG+VKLH I+ P SEF+HAEKGDALYAMELALSLEKLTNEKLL++  VA  NNDPQ+ DFVESEFLGEQ+EAI KI+ Y++QL+M+GKGHGVWHF+QMLL+
Sbjct:   22 LPHGSASPSVSLGFSRKVGG-----GRAVVVAAATVDTNNMPMTGVVFQPFEEVKKADLAIPITSHASLARQRFADASEAVINEQINVEYNVSYVYHSMYAYFDRDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRGGRVKLHPIVSPISEFEHAEKGDALYAMELALSLEKLTNEKLLNVHKVASENNDPQLADFVESEFLGEQIEAIKKISDYITQLRMIGKGHGVWHFDQMLLN 255          
BLAST of DY305519 vs. ExPASy Swiss-Prot
Match: FRI1_BRANA (Ferritin-1, chloroplastic OS=Brassica napus GN=LSC30 PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 5.135e-74
Identity = 137/207 (66.18%), Postives = 159/207 (76.81%), Query Frame = 2
Query:  212 SAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLKMVGKGHGVWHFNQMLLH 832
            S+ VD N+MP+TGVVFQPFEEVKK             ARQ+Y D  EAAINEQINVEYNVSYVYH++YAYFDRDN+AL+GL                  MEYQN RGG+V LH I+ P S+F+HAEKGDALYAMELALSLEKLTNEKLL+L  VA  NNDPQ+ DFVESEFLGEQ+EAI KI+ +++QL+MVGKGHGVWHF+QMLL+
Sbjct:   48 SSTVDTNNMPMTGVVFQPFEEVKKADLAIPITSNASLARQRYADSSEAAINEQINVEYNVSYVYHSMYAYFDRDNVALKGLAKFFKESSDEEREHAEKFMEYQNQRGGRVTLHPIVSPISDFEHAEKGDALYAMELALSLEKLTNEKLLNLHRVASENNDPQLADFVESEFLGEQIEAIKKISDFITQLRMVGKGHGVWHFDQMLLN 254          
BLAST of DY305519 vs. ExPASy Swiss-Prot
Match: FRI3_VIGUN (Ferritin-3, chloroplastic OS=Vigna unguiculata PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 1.494e-73
Identity = 141/234 (60.26%), Postives = 169/234 (72.22%), Query Frame = 2
Query:  131 SSCYSKSNASLVKLGGILPRTKRSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLKMVGKGHGVWHFNQMLLH 832
            S C S S ++ V  GG      R+++V AA      PLTGV+F+PF+E+KK+            +RQ Y DE EAAINEQINVEYNVSYVYH+L+AYFDRDNIAL+GL                  ++YQN+RGG+V LH I  PPSEF+H EKGDALYAMELALSLEKLTNEKLL + SVADRNND Q+ DF+ESEFL EQVE+I KIA+YV+QL++VGKGHGVWHF+Q LLH
Sbjct:   27 SLCSSSSLSASVNGGG-----SRNMRVCAAASNAPAPLTGVIFEPFQELKKDYLAVPIAPNVSLSRQNYSDEAEAAINEQINVEYNVSYVYHSLFAYFDRDNIALKGLAKFFKESSEEEREHAEKLIKYQNIRGGRVVLHPITSPPSEFEHPEKGDALYAMELALSLEKLTNEKLLYVHSVADRNNDAQLADFIESEFLNEQVESIKKIAEYVTQLRLVGKGHGVWHFDQRLLH 255          
BLAST of DY305519 vs. ExPASy Swiss-Prot
Match: FRI_PHAVU (Ferritin, chloroplastic OS=Phaseolus vulgaris GN=PFE PE=2 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 3.328e-73
Identity = 136/209 (65.07%), Postives = 157/209 (75.12%), Query Frame = 2
Query:  221 VDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLKMVGKGHGVWHFNQMLLHKGDAA 847
            V A+++PLTGV+F+PFEEVKKE            ARQ Y DECE+AINEQINVEYN SYVYH+L+AYFDRDN+AL+G                   M+YQN RGG+V LH I   PSEF+H EKGDALYAMELALSLEKL NEKL S+ SVADRN DPQ+ DF+ESEFL EQVEAI KI++YV+QL+MVGKGHGVWHF+Q LLH G AA
Sbjct:   46 VSASTVPLTGVIFEPFEEVKKEELAVPTAGQVSLARQYYADECESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFARFFKESSEEEREHAEKLMKYQNTRGGRVVLHPIKNVPSEFEHVEKGDALYAMELALSLEKLVNEKLRSVHSVADRNKDPQLADFIESEFLSEQVEAIKKISEYVAQLRMVGKGHGVWHFDQSLLHDGHAA 254          
BLAST of DY305519 vs. ExPASy Swiss-Prot
Match: FRI2_VIGUN (Ferritin-2, chloroplastic OS=Vigna unguiculata GN=PFE2 PE=2 SV=2)

HSP 1 Score: 274.248 bits (700), Expect = 9.684e-73
Identity = 143/221 (64.71%), Postives = 163/221 (73.76%), Query Frame = 2
Query:  179 ILPRTKRSLKVSAAVDA-NSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLKMVGKGHGVWHFNQMLLHKG 838
            +L      L V AA  + N   LTGV+F+PFEEVKKE            ARQKY DE EAA+NEQINVEYNVSYVYHAL+AYFDRDN+ALRGL                  MEYQN RGGKVKL SI+ P SEFDHA+KGDAL+AMELALSLEKLTNEKLL L SVA +N D Q+ DFVESEFLGEQVE+I +I++YV+QL+ VGKGHGVWHF+QMLLH+G
Sbjct:   26 VLANNASRLVVRAAKGSTNHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKYVDESEAAVNEQINVEYNVSYVYHALFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNRRGGKVKLQSIVMPLSEFDHADKGDALHAMELALSLEKLTNEKLLHLHSVATKNGDVQLADFVESEFLGEQVESIKRISEYVAQLRRVGKGHGVWHFDQMLLHEG 246          
BLAST of DY305519 vs. ExPASy Swiss-Prot
Match: FRI4_SOYBN (Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2)

HSP 1 Score: 273.863 bits (699), Expect = 1.265e-72
Identity = 148/239 (61.92%), Postives = 174/239 (72.80%), Query Frame = 2
Query:  143 SKSNASLVKLGGILPRT--KRSLKVSAAVDA-NSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLKMVGKGHGVWHFNQMLLHK-GDAA 847
            S S+ SL       PR+   R L V AA  + N   LTGV+F+PFEEVKKE            ARQKY DE E+A+NEQINVEYNVSYVYHA++AYFDRDN+ALRGL                  MEYQN RGGKVKL SI+ P S+FDHA+KGDAL+AMELALSLEKLTNEKLL+L SVA +N D Q+ DFVE+E+LGEQVEAI +I++YV+QL+ VGKGHGVWHF+QMLLH+ GDAA
Sbjct:    9 SASSLSLFSPNAEPPRSVPARGLVVRAAKGSTNHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKYVDESESAVNEQINVEYNVSYVYHAMFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSDFDHADKGDALHAMELALSLEKLTNEKLLNLHSVATKNGDVQLADFVETEYLGEQVEAIKRISEYVAQLRRVGKGHGVWHFDQMLLHEGGDAA 247          
BLAST of DY305519 vs. ExPASy Swiss-Prot
Match: FRI2_TOBAC (Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=FER2 PE=2 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 4.806e-72
Identity = 142/239 (59.41%), Postives = 168/239 (70.29%), Query Frame = 2
Query:  119 LTTGSSCYSKSNASLVKLGGILPRTKRSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLKMVGKGHGVWHFNQMLLHK 835
            L+T S  +   N S     G+L        V A+  +N+ PLTGVVF+PFEEVKKE            AR KY D+CEAA+NEQINVEYNVSYVYH +YAYFDRDN+AL+GL                  MEYQN RGGKVKL SI+ P SEFDHAE+GDALYAMELALSL KLTN+KLL+L +VA RNND Q+ DFVES++L EQVEAI  I++YV+QL+ VGKGHGVWHF+QMLL +
Sbjct:   23 LSTSSQGFVLKNFSTKSRNGLLV-------VCASKGSNTKPLTGVVFEPFEEVKKELMLVPTVPQVSLARHKYSDQCEAAVNEQINVEYNVSYVYHGMYAYFDRDNVALKGLARFFKESSEEERGHAEKLMEYQNKRGGKVKLQSILMPLSEFDHAEEGDALYAMELALSLAKLTNQKLLNLHAVATRNNDVQLADFVESKYLREQVEAIKMISEYVAQLRRVGKGHGVWHFDQMLLQE 254          
BLAST of DY305519 vs. ExPASy Swiss-Prot
Match: FRI2_SOYBN (Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 5.314e-71
Identity = 136/215 (63.26%), Postives = 164/215 (76.28%), Query Frame = 2
Query:  197 RSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLKMVGKGHGVWHFNQMLLHKGD 841
            RS +V AA +A + PL GV+F+PF+E+KK+          X ARQ Y D+ E+AINEQINVEYNVSYVYHAL+AYFDRDNIAL+GL                  ++YQN+RGG+V LH I  PPSEF+H+EKGDALYAMELALSLEKLTNEKLL + SVA+RNNDPQ  DF+ESEFL EQV++I KIA+YV+QL++VGKGHGVWHF+Q LLH  D
Sbjct:   42 RSSRVCAASNAPA-PLAGVIFEPFQELKKDYLAVPIAHNVXLARQNYADDSESAINEQINVEYNVSYVYHALFAYFDRDNIALKGLAKFFKESSEEEREHAEQLIKYQNIRGGRVVLHPITSPPSEFEHSEKGDALYAMELALSLEKLTNEKLLHVHSVAERNNDPQXADFIESEFLYEQVKSIKKIAEYVAQLRLVGKGHGVWHFDQKLLHDED 255          
BLAST of DY305519 vs. ExPASy Swiss-Prot
Match: FRI_MALXI (Ferritin, chloroplastic OS=Malus xiaojinensis PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 9.064e-71
Identity = 131/203 (64.53%), Postives = 154/203 (75.86%), Query Frame = 2
Query:  221 VDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLKMVGKGHGVWHFNQMLL 829
            V A+++PLTGV+F+PFEEVKK             ARQ Y DECE+AINEQINVEYN SYVYH+L+AYFDRDN+AL+G                   M+YQN RGG+V LH+I   PSEF+H EKGDALYAMELALSLEKL NEKLL++ SVADRNNDPQM DF+ESEFL EQVE+I KI++YV+QL+ VGKGHGVWHF+Q LL
Sbjct:   47 VCASTVPLTGVIFEPFEEVKKSELAVPTAPQVSLARQNYADECESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKESSEEEREHAEKLMKYQNTRGGRVVLHAIKNVPSEFEHVEKGDALYAMELALSLEKLVNEKLLNVHSVADRNNDPQMADFIESEFLSEQVESIKKISEYVAQLRRVGKGHGVWHFDQRLL 249          
The following BLAST results are available for this feature:
BLAST of DY305519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
FRI3_SOYBN2.463e-7666.36Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI1_ARATH1.765e-7461.09Ferritin-1, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI1_BRANA5.135e-7466.18Ferritin-1, chloroplastic OS=Brassica napus GN=LSC... [more]
FRI3_VIGUN1.494e-7360.26Ferritin-3, chloroplastic OS=Vigna unguiculata PE=... [more]
FRI_PHAVU3.328e-7365.07Ferritin, chloroplastic OS=Phaseolus vulgaris GN=P... [more]
FRI2_VIGUN9.684e-7364.71Ferritin-2, chloroplastic OS=Vigna unguiculata GN=... [more]
FRI4_SOYBN1.265e-7261.92Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2[more]
FRI2_TOBAC4.806e-7259.41Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI2_SOYBN5.314e-7163.26Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI_MALXI9.064e-7164.53Ferritin, chloroplastic OS=Malus xiaojinensis PE=3... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAM1BB06RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305519 ID=DY305519; Name=DY305519; organism=Citrus sinensis; type=EST; length=1144bp
GTTCTTCTTCATCAAATTCATTTGCTTTCTTCCTTCAATCTCCATTACGC
ACTTGCTTACAGCAATGGCATTGGCAGCTTCTTCATCCTCCTCTCTTGCA
GCGAAGCAACTGGCTGGTCTTACAACAGGCTCATCATGTTACTCCAAGTC
TAATGCTTCTCTTGTGAAATTGGGTGGTATTTTGCCAAGAACGAAGAGGA
GTCTGAAGGTTTCTGCTGCTGTGGACGCCAATAGCATGCCGCTGACCGGG
GTCGTGTTTCAGCCATTCGAAGAGGTCAAGAAAGAGGTTCTTGATGTTCC
TGTTTCCCCTCTGCTTTCACTAGCTCGCCAAAAGTACGAGGACGAGTGTG
AGGCCGCTATCAACGAGCAGATCAATGTGGAATATAATGTCTCATACGTG
TACCATGCCCTGTATGCGTACTTTGATCGGGATAATATTGCTCTGAGAGG
CCTTGCCAAATTTTTCAAGGAGTCCAGTGAAGAAGAAAGGGAACATGCTG
AGAAGTTTATGGAGTATCAGAACTTGCGCGGTGGAAAAGTAAAACTGCAC
TCCATAATGCAGCCCCCTTCGGAGTTTGATCATGCAGAGAAAGGGGATGC
CTTGTATGCAATGGAACTAGCATTGTCCCTGGAGAAGCTAACAAACGAGA
AGCTTCTGAGCCTGCGCAGTGTGGCGGATAGAAACAATGATCCCCAAATG
GGAGATTTTGTCGAGAGTGAATTTTTGGGTGAGCAGGTTGAAGCAATTAA
CAAGATCGCTAAATATGTTTCTCAACTTAAGATGGTTGGGAAAGGCCACG
GAGTATGGCACTTCAATCAAATGCTTCTCCACAAGGGTGATGCTGCCAGA
TGAAAAACCAAATTGTACATTTCTTTGTGGTTTAATCCACTCTTTGCTGC
CAAATGTTCTGAAATATCTCTGCCCAAGGAGGTTGAAATGTGTTGTCAAA
AAAAAACCTGAAACAGTGAAAAAATCCACAAAGTCAATAACTCAAAACCC
CCCCTTGCTTATCAAAATTAATGTGGGTCCCTTTTAAAAAAGTCTTTTTT
AGGGGGGCTTTTTTCTTAATTTAAAAAAAAAACAGTGGGAAAGGGGATTA
AAAAAATTTTAAACAAAAAACCCCAAATTCCATCTTCTGGAATT
back to top