EY702556

Overview
NameEY702556
Unique NameEY702556
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702556 vs. ExPASy Swiss-Prot
Match: PDC1_ORYSJ (Pyruvate decarboxylase isozyme 1 OS=Oryza sativa subsp. japonica GN=PDC1 PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.142e-61
Identity = 118/151 (78.15%), Postives = 132/151 (87.42%), Query Frame = 1
Query:  154 KPPCSDLASPPNGAVSTIQSSVPATPLVNPSESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHYTIGLA*F 606
            KP C+ + S P   VS+  ++V   P+ + + +TLGRHLARRLVQIGATDVF+VPGDFNLTLLD+LIAEPGL LIGCCNELNAGYAADGYAR+RGVGAC VTFTVGGLSVLNAIAGAYSENLP+ICIVGGPNSNDYGTNRILH+TIGL  F
Sbjct:   15 KPSCNSVGSLP--VVSS--NAVINPPVTSAAGATLGRHLARRLVQIGATDVFAVPGDFNLTLLDYLIAEPGLKLIGCCNELNAGYAADGYARARGVGACAVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDF 161          

HSP 2 Score: 25.409 bits (54), Expect = 1.142e-61
Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = 2
Query:  590 LGLPDFSQELR 622
            +GLPDFSQELR
Sbjct:  156 IGLPDFSQELR 166          
BLAST of EY702556 vs. ExPASy Swiss-Prot
Match: PDC1_ORYSI (Pyruvate decarboxylase isozyme 1 OS=Oryza sativa subsp. indica GN=PDC1 PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.142e-61
Identity = 118/151 (78.15%), Postives = 132/151 (87.42%), Query Frame = 1
Query:  154 KPPCSDLASPPNGAVSTIQSSVPATPLVNPSESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHYTIGLA*F 606
            KP C+ + S P   VS+  ++V   P+ + + +TLGRHLARRLVQIGATDVF+VPGDFNLTLLD+LIAEPGL LIGCCNELNAGYAADGYAR+RGVGAC VTFTVGGLSVLNAIAGAYSENLP+ICIVGGPNSNDYGTNRILH+TIGL  F
Sbjct:   15 KPSCNSVGSLP--VVSS--NAVIHPPVTSAAGATLGRHLARRLVQIGATDVFAVPGDFNLTLLDYLIAEPGLKLIGCCNELNAGYAADGYARARGVGACAVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDF 161          

HSP 2 Score: 25.409 bits (54), Expect = 1.142e-61
Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = 2
Query:  590 LGLPDFSQELR 622
            +GLPDFSQELR
Sbjct:  156 IGLPDFSQELR 166          
BLAST of EY702556 vs. ExPASy Swiss-Prot
Match: PDC1_MAIZE (Pyruvate decarboxylase isozyme 1 OS=Zea mays GN=PDC1 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.941e-61
Identity = 115/152 (75.66%), Postives = 130/152 (85.53%), Query Frame = 1
Query:  154 KPPCSDL-ASPPNGAVSTIQSSVPATPLVNPSESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHYTIGLA*F 606
            KP C+ + A P   + + I +   A   + P+ +TLGRHLARRLVQIGA+DVF+VPGDFNLTLLD+LIAEPGL L+GCCNELNAGYAADGYARSRGVGAC VTFTVGGLSVLNAIAGAYSENLP++CIVGGPNSNDYGTNRILH+TIGL  F
Sbjct:   15 KPTCNGVGALPVANSHAIIATPAAAAATLAPAGATLGRHLARRLVQIGASDVFAVPGDFNLTLLDYLIAEPGLTLVGCCNELNAGYAADGYARSRGVGACAVTFTVGGLSVLNAIAGAYSENLPVVCIVGGPNSNDYGTNRILHHTIGLPDF 166          

HSP 2 Score: 25.409 bits (54), Expect = 1.941e-61
Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = 2
Query:  590 LGLPDFSQELR 622
            +GLPDFSQELR
Sbjct:  161 IGLPDFSQELR 171          
BLAST of EY702556 vs. ExPASy Swiss-Prot
Match: PDC2_ORYSJ (Pyruvate decarboxylase isozyme 2 OS=Oryza sativa subsp. japonica GN=PDC2 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 3.594e-60
Identity = 115/150 (76.67%), Postives = 127/150 (84.67%), Query Frame = 1
Query:  175 ASPPNGAVSTIQSSV--PATPL----VNPSESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHYTIGLA*F 606
            A+  NGAV    S+V  P T      V+  E++LGRHLARRLVQ+G +DVF+VPGDFNLTLLDHLIAEPGL L+GCCNELNAGYAADGYAR+RGVGAC VTFTVGGLSVLNAIAGAYSENLP+ICI GGPNSNDYGTNRILH+TIGL  F
Sbjct:   13 AAADNGAVGCPASAVGCPMTSARPAPVSAGEASLGRHLARRLVQVGVSDVFAVPGDFNLTLLDHLIAEPGLRLVGCCNELNAGYAADGYARARGVGACAVTFTVGGLSVLNAIAGAYSENLPVICIAGGPNSNDYGTNRILHHTIGLPDF 162          

HSP 2 Score: 26.1794 bits (56), Expect = 3.594e-60
Identity = 12/22 (54.55%), Postives = 14/22 (63.64%), Query Frame = 2
Query:  590 LGLPDFSQELRWLS--DCHLVI 649
            +GLPDFSQELR      CH  +
Sbjct:  157 IGLPDFSQELRCFQTVTCHQAV 178          
BLAST of EY702556 vs. ExPASy Swiss-Prot
Match: PDC2_ORYSI (Pyruvate decarboxylase isozyme 2 OS=Oryza sativa subsp. indica GN=PDC2 PE=2 SV=2)

HSP 1 Score: 227.639 bits (579), Expect = 3.594e-60
Identity = 115/150 (76.67%), Postives = 127/150 (84.67%), Query Frame = 1
Query:  175 ASPPNGAVSTIQSSV--PATPL----VNPSESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHYTIGLA*F 606
            A+  NGAV    S+V  P T      V+  E++LGRHLARRLVQ+G +DVF+VPGDFNLTLLDHLIAEPGL L+GCCNELNAGYAADGYAR+RGVGAC VTFTVGGLSVLNAIAGAYSENLP+ICI GGPNSNDYGTNRILH+TIGL  F
Sbjct:   13 AAADNGAVGCPASAVGCPMTSARPAPVSAGEASLGRHLARRLVQVGVSDVFAVPGDFNLTLLDHLIAEPGLRLVGCCNELNAGYAADGYARARGVGACAVTFTVGGLSVLNAIAGAYSENLPVICIAGGPNSNDYGTNRILHHTIGLPDF 162          

HSP 2 Score: 26.1794 bits (56), Expect = 3.594e-60
Identity = 12/22 (54.55%), Postives = 14/22 (63.64%), Query Frame = 2
Query:  590 LGLPDFSQELRWLS--DCHLVI 649
            +GLPDFSQELR      CH  +
Sbjct:  157 IGLPDFSQELRCFQTVTCHQAV 178          
BLAST of EY702556 vs. ExPASy Swiss-Prot
Match: PDC1_PEA (Pyruvate decarboxylase isozyme 1 OS=Pisum sativum GN=PDC1 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 2.302e-59
Identity = 112/142 (78.87%), Postives = 123/142 (86.62%), Query Frame = 1
Query:  184 PNGAVSTIQSSVPATPLVNPS-ESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHYTIGLA*F 606
            PNG+     S+  A PL   S + T+GRHLARRLV+IG  DVFSVPGDFNLTLLDHLIAEP LNL+GCCNELNAGYAADGY R++GVGACVVTFTVGGLS+LNAIAGAYSENLP+ICIVGGPNSNDYGTNRILH+TIGL  F
Sbjct:    8 PNGSTPCPTSAPSAIPLRPSSCDGTMGRHLARRLVEIGVRDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYGRAKGVGACVVTFTVGGLSILNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDF 149          

HSP 2 Score: 23.8682 bits (50), Expect = 2.302e-59
Identity = 9/11 (81.82%), Postives = 11/11 (100.00%), Query Frame = 2
Query:  590 LGLPDFSQELR 622
            +GLPDFSQEL+
Sbjct:  144 IGLPDFSQELQ 154          
BLAST of EY702556 vs. ExPASy Swiss-Prot
Match: PDC2_TOBAC (Pyruvate decarboxylase isozyme 2 OS=Nicotiana tabacum GN=PDC2 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.474e-58
Identity = 111/136 (81.62%), Postives = 122/136 (89.71%), Query Frame = 1
Query:  199 STIQSSVPATPLVNPSESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHYTIGLA*F 606
            S IQ S  ++ + N +++TLGRHLARRLV+IG  DVFSVPGDFNLTLLDHLIAEP L  IGCCNELNAGYAADGYAR+RGVGACVVTFTVGGLSVLNAIAGAYSENLP+ICIVGGPN+NDYGTNRILH+TIGL  F
Sbjct:   10 SCIQDSQSSSVIAN-TDATLGRHLARRLVEIGIQDVFSVPGDFNLTLLDHLIAEPRLKNIGCCNELNAGYAADGYARARGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNTNDYGTNRILHHTIGLPDF 144          

HSP 2 Score: 25.409 bits (54), Expect = 1.474e-58
Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = 2
Query:  590 LGLPDFSQELR 622
            +GLPDFSQELR
Sbjct:  139 IGLPDFSQELR 149          
BLAST of EY702556 vs. ExPASy Swiss-Prot
Match: PDC3_ORYSJ (Pyruvate decarboxylase isozyme 3 OS=Oryza sativa subsp. japonica GN=PDC3 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 5.555e-58
Identity = 105/128 (82.03%), Postives = 116/128 (90.62%), Query Frame = 1
Query:  223 ATPLVNPSESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHYTIGLA*F 606
            A  + +  ++TLG HLARRLVQ+G +DVF+VPGDFNLTLLDHLIAEPGL ++GCCNELNAGYAADGYAR+RGVGAC VTFTVGGLSVLNAI GAYSENLPLICIVGGPNSNDYGTNRILH+TIGL  F
Sbjct:   15 AVVVPSSGDATLGGHLARRLVQVGVSDVFAVPGDFNLTLLDHLIAEPGLRVVGCCNELNAGYAADGYARARGVGACAVTFTVGGLSVLNAIGGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDF 142          

HSP 2 Score: 25.409 bits (54), Expect = 5.555e-58
Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = 2
Query:  590 LGLPDFSQELR 622
            +GLPDFSQELR
Sbjct:  137 IGLPDFSQELR 147          
BLAST of EY702556 vs. ExPASy Swiss-Prot
Match: PDC3_ORYSI (Pyruvate decarboxylase isozyme 3 OS=Oryza sativa subsp. indica GN=PDC3 PE=2 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 5.555e-58
Identity = 105/128 (82.03%), Postives = 116/128 (90.62%), Query Frame = 1
Query:  223 ATPLVNPSESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHYTIGLA*F 606
            A  + +  ++TLG HLARRLVQ+G +DVF+VPGDFNLTLLDHLIAEPGL ++GCCNELNAGYAADGYAR+RGVGAC VTFTVGGLSVLNAI GAYSENLPLICIVGGPNSNDYGTNRILH+TIGL  F
Sbjct:   15 AVVVPSSGDATLGGHLARRLVQVGVSDVFAVPGDFNLTLLDHLIAEPGLRVVGCCNELNAGYAADGYARARGVGACAVTFTVGGLSVLNAIGGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDF 142          

HSP 2 Score: 25.409 bits (54), Expect = 5.555e-58
Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = 2
Query:  590 LGLPDFSQELR 622
            +GLPDFSQELR
Sbjct:  137 IGLPDFSQELR 147          
BLAST of EY702556 vs. ExPASy Swiss-Prot
Match: PDC2_SCHPO (Probable pyruvate decarboxylase C1F8.07c OS=Schizosaccharomyces pombe GN=SPAC1F8.07c PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 3.515e-32
Identity = 64/117 (54.70%), Postives = 86/117 (73.50%), Query Frame = 1
Query:  244 SESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHYTIG 594
            S  T+G +LA+RLV+IG  + F VPGD+NL LLD L   PGL+ IGCCNELN  +AA+GYARS G+   VVT++VG L+  + I GAY+ENLP+I + G PN+ND  +  +LH+T+G
Sbjct:    7 STMTVGTYLAQRLVEIGIKNHFVVPGDYNLRLLDFLEYYPGLSEIGCCNELNCAFAAEGYARSNGIACAVVTYSVGALTAFDGIGGAYAENLPVILVSGSPNTNDLSSGHLLHHTLG 123          
The following BLAST results are available for this feature:
BLAST of EY702556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
PDC1_ORYSJ1.142e-6178.15Pyruvate decarboxylase isozyme 1 OS=Oryza sativa s... [more]
PDC1_ORYSI1.142e-6178.15Pyruvate decarboxylase isozyme 1 OS=Oryza sativa s... [more]
PDC1_MAIZE1.941e-6175.66Pyruvate decarboxylase isozyme 1 OS=Zea mays GN=PD... [more]
PDC2_ORYSJ3.594e-6076.67Pyruvate decarboxylase isozyme 2 OS=Oryza sativa s... [more]
PDC2_ORYSI3.594e-6076.67Pyruvate decarboxylase isozyme 2 OS=Oryza sativa s... [more]
PDC1_PEA2.302e-5978.87Pyruvate decarboxylase isozyme 1 OS=Pisum sativum ... [more]
PDC2_TOBAC1.474e-5881.62Pyruvate decarboxylase isozyme 2 OS=Nicotiana taba... [more]
PDC3_ORYSJ5.555e-5882.03Pyruvate decarboxylase isozyme 3 OS=Oryza sativa s... [more]
PDC3_ORYSI5.555e-5882.03Pyruvate decarboxylase isozyme 3 OS=Oryza sativa s... [more]
PDC2_SCHPO3.515e-3254.70Probable pyruvate decarboxylase C1F8.07c OS=Schizo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-009-D07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702556 ID=EY702556; Name=EY702556; organism=Citrus sinensis; type=EST; length=910bp
CCACGCGTCCGGGCACACTCTATAAGTCAAAAAAAAAAAAAAAACATTTC
TCAAAGACACTTTTCGGAAACACATTAACAAACGGACAATTCTTCGTCTC
CGGCCCTTCAATCAATCATGGACACTAAAGATGGGGTGCGGCTCGACACC
TGCAAGCCCCCATGCAGCGACTTAGCCAGCCCGCCAAACGGTGCCGTTTC
AACAATCCAATCCTCCGTTCCCGCTACTCCACTCGTCAACCCGTCCGAGT
CGACCCTCGGCCGCCACCTCGCTCGCCGGCTCGTCCAAATCGGCGCCACC
GACGTCTTCTCGGTCCCCGGCGACTTCAACTTGACGCTTCTCGACCACCT
GATAGCCGAGCCCGGGCTCAACTTGATCGGTTGCTGTAACGAGCTGAATG
CCGGATACGCTGCCGATGGGTACGCTCGCTCCCGTGGGGTCGGCGCCTGT
GTCGTGACCTTCACCGTTGGTGGGCTTAGCGTGCTTAACGCTATCGCCGG
TGCTTACAGTGAAAATCTGCCGTTGATTTGCATCGTTGGTGGGCCAAACT
CCAATGATTACGGAACCAACAGGATCCTTCATTATACCATTGGGCTTGCC
TGATTTTAGCCAAGAACTCCGATGGCTCTCAGACTGCCACCTGGTTATCA
GGGGTGGGGGGGAATAACTTGGAAGGAGCCCCCTGAGTTGATTGGTACGG
CGAGTACCACCTGCTTTTAAAGAAAGCCAGCCTGGTTTATACACCCGGTG
CTTGGAAACTTGCCTCGCGACTCCTCCTCCTACCTTTTACCCAAAACCCC
CTCCCCTTTCCCCTTTCTCCCCACGCCGACTAATGAAAGGGCCTCGGAGG
CTTCAACTTGAGGGGCCCACCCAAACTCCTCCGACCAGGGGGGGCAACCC
AGTGGTGGCG
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