EY671330

Overview
NameEY671330
Unique NameEY671330
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY671330 vs. ExPASy Swiss-Prot
Match: ERI2_HUMAN (ERI1 exoribonuclease 2 OS=Homo sapiens GN=ERI2 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.487e-34
Identity = 82/208 (39.42%), Postives = 121/208 (58.17%), Query Frame = 1
Query:   25 YFVVIDFEATCHKD-KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-KGIKNTNFAV---------------VTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRGHCGLNDAKNTGRLL*LLMHRSFNFSIKNSLN 597
            Y +VIDFE+TC  D K+ + QEIIEFP+V++++ TGQ+++ FQ YV+P  + +LS+FC +LTGI+Q QVD GV L   L +  KW+   +  KN  FA                VTWS+WD  V LE EC+ K++ KP + N WI+L+  +   +      L  A++  G+ + GR H GL+D++NT  L   ++       I  SLN
Sbjct:   36 YLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPILSEFCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGISEPSASEVKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCVMKITRSLN 243          
BLAST of EY671330 vs. ExPASy Swiss-Prot
Match: ERI2_MOUSE (ERI1 exoribonuclease 2 OS=Mus musculus GN=Eri2 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.644e-33
Identity = 79/208 (37.98%), Postives = 119/208 (57.21%), Query Frame = 1
Query:   25 YFVVIDFEATCHKD-KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAV---------------VTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRGHCGLNDAKNTGRLL*LLMHRSFNFSIKNSLN 597
            Y +V+DFE+TC  D K+    EIIEFP+V++++ TG++E+ F  YV+P  + +LS+FC +LTGI+Q+QVD GV L   L +  KW+     + T +FA                VTWS+WD  V LE ECR K++ KP + N WI+L+  +   +      L  A++  G+ + GR H GL+D++NT  L   ++       I  SLN
Sbjct:   36 YLIVVDFESTCWNDGKHHSSPEIIEFPAVLLNTATGEIESEFHAYVQPQEHPILSEFCTELTGIKQVQVDEGVPLKICLSQFCKWIHKLQQQQTISFAAGDSEPSTSEVKLCAFVTWSDWDLGVCLEYECRRKQLLKPVFLNSWIDLRATYRLFYKRKPKGLSGALQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCLMKITRSLN 243          
BLAST of EY671330 vs. ExPASy Swiss-Prot
Match: ERI2_XENLA (ERI1 exoribonuclease 2 OS=Xenopus laevis GN=eri2 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.162e-33
Identity = 76/189 (40.21%), Postives = 111/189 (58.73%), Query Frame = 1
Query:   25 YFVVIDFEATCHKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE----NKGI------------KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRGHCGLNDAKNTGRL 543
            Y ++IDFE+TC KD     QEIIEFP+V+++   G++E+ F TYV+P  + +LSDFC +LTGI Q QVD GV L   L + + W++     KGI            ++   A VTWS+WD  V L  ECR K++ KP   N WI+L+  +   +      L  A++  G+ + GR H GL+D++NT +L
Sbjct:   37 YLIIIDFESTCWKDGKHSTQEIIEFPAVLLNVSNGEIESEFHTYVQPQEHPILSDFCTELTGINQQQVDDGVPLKICLSQFNSWIQKLQKEKGIAFVTAVPTHSTAEHKMCAFVTWSDWDLGVCLLYECRRKQMKKPDILNSWIDLRATYKLFYNRRPKGLNGALQDLGIEFSGREHSGLDDSRNTAKL 225          
BLAST of EY671330 vs. ExPASy Swiss-Prot
Match: ERI1_HUMAN (3'-5' exoribonuclease 1 OS=Homo sapiens GN=ERI1 PE=1 SV=3)

HSP 1 Score: 128.257 bits (321), Expect = 5.474e-29
Identity = 67/177 (37.85%), Postives = 102/177 (57.63%), Query Frame = 1
Query:   25 YFVVIDFEATCHKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRGHCGLNDAKNTGRL 543
            Y  +IDFEATC +   P +  EIIEFP V++++ T ++E  FQ YVRP  N  LSDFC  LTGI Q QVDR  T  + L +   W++ K +     ++++T  +WD    L  +C+  ++  PP+  +WIN++  +   +   R   K  +  E  G+ + GR HCGL+D+KN  R+
Sbjct:  129 YICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIARI 305          
BLAST of EY671330 vs. ExPASy Swiss-Prot
Match: ERI3_HUMAN (ERI1 exoribonuclease 3 OS=Homo sapiens GN=ERI3 PE=1 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 1.220e-28
Identity = 72/194 (37.11%), Postives = 108/194 (55.67%), Query Frame = 1
Query:    4 FPASAL*YFVVIDFEATCHKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRGHCGLNDAKNTGRLL*LLMHRSFNF 576
            FP     YF+V+DFEATC K +  +PQEIIEFP + ++  T ++E+ F  YV+P  +  L+ FC +LTGI Q  VD   +L + L R D+W+  +G+   N     VT  +WD +VML  +C++  +    YF +WINLK  +    G   +  L +  +   L   GR H G++D KN   ++  L +R F F
Sbjct:  138 FPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIF 330          
BLAST of EY671330 vs. ExPASy Swiss-Prot
Match: ERI3_BOVIN (ERI1 exoribonuclease 3 OS=Bos taurus GN=ERI3 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.220e-28
Identity = 72/194 (37.11%), Postives = 108/194 (55.67%), Query Frame = 1
Query:    4 FPASAL*YFVVIDFEATCHKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRGHCGLNDAKNTGRLL*LLMHRSFNF 576
            FP     YF+V+DFEATC K +  +PQEIIEFP + ++  T ++E+ F  YV+P  +  L+ FC +LTGI Q  VD   +L + L R D+W+  +G+   N     VT  +WD +VML  +C++  +    YF +WINLK  +    G   +  L +  +   L   GR H G++D KN   ++  L +R F F
Sbjct:  138 FPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIF 330          
BLAST of EY671330 vs. ExPASy Swiss-Prot
Match: ERI3_MOUSE (ERI1 exoribonuclease 3 OS=Mus musculus GN=Eri3 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.593e-28
Identity = 72/194 (37.11%), Postives = 107/194 (55.15%), Query Frame = 1
Query:    4 FPASAL*YFVVIDFEATCHKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRGHCGLNDAKNTGRLL*LLMHRSFNF 576
            FP     YF+V+DFEATC K +  +PQEIIEFP + ++  T ++E+ F  YV+P  +  L+ FC +LTGI Q  VD   +L + L R D+W+  +G+   N     VT  +WD +VML  +C +  +    YF +WINLK  +    G   +  L +  +   L   GR H G++D KN   ++  L +R F F
Sbjct:  138 FPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCHYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIF 330          
BLAST of EY671330 vs. ExPASy Swiss-Prot
Match: ERI2_DANRE (ERI1 exoribonuclease 2 OS=Danio rerio GN=eri2 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.300e-27
Identity = 73/201 (36.32%), Postives = 107/201 (53.23%), Query Frame = 1
Query:   25 YFVVIDFEATCHKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL----ENKGI-----------KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRGHCGLNDAKNTGRLL*LLMHRSFNFSI 582
            + ++IDFE+TC ++K+   QEIIEFP+V++S  +G +E+ F +YV+P    +LS FC +LTGI Q QVD    L   L R  +WL    E +G+                A VTWS+WD  V L  EC+ K++  P     WI+L+  +   +      L+ A+   G+ + GR H GL DA+NT  L   +M      SI
Sbjct:   34 FLIIIDFESTCWREKSSSGQEIIEFPAVLLSVCSGAVESEFHSYVQPQERPVLSAFCTELTGITQDQVDSAPPLHVVLSRFSRWLRSLQEERGVVFLTDSSGAAPSAQLCAFVTWSDWDLGVCLLYECKRKQLSVPEALKNWIDLRATYKLFYNRKPKGLRGALLDLGIEFTGREHSGLVDARNTALLAQRMMTDGCQLSI 234          
BLAST of EY671330 vs. ExPASy Swiss-Prot
Match: ERI1_MOUSE (3'-5' exoribonuclease 1 OS=Mus musculus GN=Eri1 PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.491e-26
Identity = 65/178 (36.52%), Postives = 102/178 (57.30%), Query Frame = 1
Query:   25 YFVVIDFEATCHKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRGHCGLNDAKNTGRL 543
            Y  +IDFEATC ++ NP  +  EIIEFP V++++ T ++E  FQ YVRP  N  LS+FC  LTGI Q QVDR     + L +  +W+++K +     + ++T  +WD    L  +CR  ++  P +  +WIN++  +   +   R   K  +  E  G+ + GR H GL+D+KN  R+
Sbjct:  125 YICIIDFEATC-EEGNPAEFLHEIIEFPVVLLNTHTLEIEDTFQQYVRPEVNAQLSEFCIGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLSIQCRLSRLKHPAFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARI 301          
BLAST of EY671330 vs. ExPASy Swiss-Prot
Match: ERI1_RAT (3'-5' exoribonuclease 1 OS=Rattus norvegicus GN=Eri1 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.663e-26
Identity = 65/196 (33.16%), Postives = 107/196 (54.59%), Query Frame = 1
Query:   25 YFVVIDFEATCHKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRGHCGLNDAKNTGRLL*LLMHRSFNFSIKNSLN 597
            Y  +IDFEATC ++ NP  +  EIIEFP V++++ + ++E  FQ YVRP  N  LS+FC  LTGI Q QVDR     + L +  +W+++K +     + ++T  +WD    L  +C+  ++  P +  +WIN++  +   +   R   K  +  E  G+ + GR H GL+D+KN  R+   ++       I   L+
Sbjct:  125 YICIIDFEATC-EEGNPAEFLHEIIEFPVVLLNTHSLEIEDTFQQYVRPEVNSQLSEFCIGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLNIQCQLSRLKYPSFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIAVRMLQDGCELRINEKLH 319          
The following BLAST results are available for this feature:
BLAST of EY671330 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
ERI2_HUMAN1.487e-3439.42ERI1 exoribonuclease 2 OS=Homo sapiens GN=ERI2 PE=... [more]
ERI2_MOUSE1.644e-3337.98ERI1 exoribonuclease 2 OS=Mus musculus GN=Eri2 PE=... [more]
ERI2_XENLA8.162e-3340.21ERI1 exoribonuclease 2 OS=Xenopus laevis GN=eri2 P... [more]
ERI1_HUMAN5.474e-2937.853'-5' exoribonuclease 1 OS=Homo sapiens GN=ERI1 PE... [more]
ERI3_HUMAN1.220e-2837.11ERI1 exoribonuclease 3 OS=Homo sapiens GN=ERI3 PE=... [more]
ERI3_BOVIN1.220e-2837.11ERI1 exoribonuclease 3 OS=Bos taurus GN=ERI3 PE=2 ... [more]
ERI3_MOUSE1.593e-2837.11ERI1 exoribonuclease 3 OS=Mus musculus GN=Eri3 PE=... [more]
ERI2_DANRE2.300e-2736.32ERI1 exoribonuclease 2 OS=Danio rerio GN=eri2 PE=2... [more]
ERI1_MOUSE1.491e-2636.523'-5' exoribonuclease 1 OS=Mus musculus GN=Eri1 PE... [more]
ERI1_RAT9.663e-2633.163'-5' exoribonuclease 1 OS=Rattus norvegicus GN=Er... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-098-H11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY671330 ID=EY671330; Name=EY671330; organism=Citrus sinensis; type=EST; length=843bp
TGATTTCCAGCCTCAGCACTTTAGTATTTTGTGGTAATAGACTTTGAGGC
TACTTGCCACAAGGACAAGAATCCTTATCCCCAGGAGATAATCGAGTTTC
CATCTGTCATTGTGAGTAGTGTAACTGGTCAACTGGAAGCATGTTTTCAG
ACATATGTGCGGCCGACTTGCAATCAACTACTGAGTGATTTCTGCAAGGA
TCTGACAGGTATCCAGCAAATTCAGGTGGACAGAGGTGTTACTCTAAGCG
AGGCTTTACTTAGGCATGACAAATGGCTTGAGAATAAGGGCATAAAAAAC
ACCAACTTTGCTGTCGTGACATGGTCAAATTGGGATTGTCGGGTAATGTT
GGAATCTGAATGCCGATTCAAAAAGATTTGGAAACCTCCTTATTTTAACA
GATGGATCAACTTAAAAGTTCCATTTCATGAGGTTTTTGGTGGAGTGAGG
TGCAATTTAAAAGAAGCTGTTGAGATGGCAGGCCTGGCATGGCAAGGCCG
TGGCCACTGTGGGCTAAATGATGCGAAAAATACTGGTCGCCTACTTTGAC
TCCTCATGCACAGAAGTTTCAATTTCTCCATTAAAAATTCTTTGAATGTG
GCAGACCAATGATGGGTTTCCTGAAATGGCAATCAGTTCCCCTAAACGCC
TATCTCTTTCACCCACATTCGTGTTGCCGCAACCCAAACGGGTCTTGCAA
AATCCCTTATTTCCAAGTACCATACATAATTGGTTTTTCGTGGGGTGAAA
AACCAACCATACGGTAGCCGTCAAGACACTTCGGGACACAACTACAGGGC
ACGTATCTCTTTCGGAGCGCGCTACACCATGGAATGCCCTGGC
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