EY671322
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY671322 vs. ExPASy Swiss-Prot
Match: RBS_LACSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1) HSP 1 Score: 289.271 bits (739), Expect = 1.750e-77 Identity = 133/177 (75.14%), Postives = 151/177 (85.31%), Query Frame = 1 Query: 43 ISSATVATANRASLAHASMVAPFTGLKSSSAFPATNKTNNDITSIASNGGRVQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSP*YYDGRYWTMWKLPMYGCTDATQDLKEGGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPGV 573 ISS+ +AT NR + AS+ APFTGLKS+ AFP T K NND +S+ SNGGRVQCMKVWPP GLKK ETLSYLPPLSDEAL KEI+YLIR+ WIPCLEFELE G+VYREHH SP YYDGRYWTMWKLPM+GCTD+ Q +KE GE +KEYP++F+R+IGFDN RQVQCISFI AKPPGV Sbjct: 4 ISSSAIATVNRTTSTQASLAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKPPGV 180
BLAST of EY671322 vs. ExPASy Swiss-Prot
Match: RBS_FAGCR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Fagus crenata GN=RBCS1 PE=2 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 6.652e-77 Identity = 139/180 (77.22%), Postives = 155/180 (86.11%), Query Frame = 1 Query: 28 MASSMISSATVATANRASLAHASMVAPFTGLKSSSAFPATNKTNNDITSIASNGGRVQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSP*YYDGRYWTMWKLPMYGCTDATQDLKEGGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPP 567 MASSMISSATVAT +RA+ A A+MVAPFTGLKS++AFPAT K+NNDITS+ASNGGRVQCMKVWPP GL+K ETLSYLPPLS E+L K+I YLI GWIPCLEFELE +VYRE+++SP YYDGRYW MWKLPM+GCTDATQ L E E K YP S +RIIGFDNKRQVQCISFIA KPP Sbjct: 1 MASSMISSATVATVSRATPAQATMVAPFTGLKSTAAFPATRKSNNDITSLASNGGRVQCMKVWPPLGLQKFETLSYLPPLSIESLAKQIEYLILKGWIPCLEFELEHPFVYRENNRSPGYYDGRYWVMWKLPMFGCTDATQVLAELQEASKTYPTSHIRIIGFDNKRQVQCISFIAYKPP 180
BLAST of EY671322 vs. ExPASy Swiss-Prot
Match: RBS_BETVE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 1.135e-76 Identity = 139/182 (76.37%), Postives = 155/182 (85.16%), Query Frame = 1 Query: 28 MASSMISSATVATANRASLAHASMVAPFTGLKSSSAFPATNKTNNDITSIASNGGRVQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSP*YYDGRYWTMWKLPMYGCTDATQDLKEGGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPGV 573 MA SMISSATVA +RAS A +SMVAPFT LKS+SAFP T KTNNDITSIASNGGRVQCM+VWPP GLKK ETLSYLPPLS E L KE++YL+R IPCLEFELE G+VYREH++SP YYDGRYWTMWKLPM+GC D++Q LKE E +K YP +F+RIIGFDNKRQVQ ISFIA KPPGV Sbjct: 1 MACSMISSATVAAVSRASPAQSSMVAPFTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQIISFIAYKPPGV 182
BLAST of EY671322 vs. ExPASy Swiss-Prot
Match: RBS_PYRPY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1) HSP 1 Score: 281.567 bits (719), Expect = 3.650e-75 Identity = 138/183 (75.41%), Postives = 155/183 (84.70%), Query Frame = 1 Query: 28 MASSMISSATVAT--ANRASLAHASMVAPFTGLKSSSAFPATNKTNNDITSIASNGGRVQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSP*YYDGRYWTMWKLPMYGCTDATQDLKEGGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 570 MASSMISS TVAT A+R + A A MVAPF GLKSSSAFP T K+N DITSIASNGGRVQCM+VWPP GLKK ETLSYLPPLS E+L KE++YL+R W+PCLEFELE G+VYRE+H+SP YYDGRYWTMWKLPM+GCTD++Q LKE E +K YP SF+RIIGFDN RQVQCISFIA KP G Sbjct: 1 MASSMISSGTVATVSADRPAPAQARMVAPFNGLKSSSAFPVTRKSN-DITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKEVDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPAG 182
BLAST of EY671322 vs. ExPASy Swiss-Prot
Match: RBS_MALSP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Malus sp. GN=RBCS PE=2 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 1.062e-74 Identity = 138/183 (75.41%), Postives = 155/183 (84.70%), Query Frame = 1 Query: 28 MASSMISSATVAT--ANRASLAHASMVAPFTGLKSSSAFPATNKTNNDITSIASNGGRVQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSP*YYDGRYWTMWKLPMYGCTDATQDLKEGGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 570 MASSMISS TVAT A+R + A A MVAPFTGLKSSSA P T K+N DITSIASNGGRVQCM+VWPP GLKK ETLSYLPPLS E+L KE++YL+R W+PCLEFELE G+VYRE+H+SP YYDGRYWTMWKLPM+GCTD++Q LKE E +K YP SF+RIIGFDN RQVQCISFIA KP G Sbjct: 1 MASSMISSGTVATVSADRPAPAQARMVAPFTGLKSSSASPVTRKSN-DITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPAG 182
BLAST of EY671322 vs. ExPASy Swiss-Prot
Match: RBS_MEDSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 277.715 bits (709), Expect = 5.271e-74 Identity = 129/176 (73.30%), Postives = 149/176 (84.66%), Query Frame = 1 Query: 37 SMISSATVATANRASLAHASMVAPFTGLKSSSAFPATNKTNNDITSIASNGGRVQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSP*YYDGRYWTMWKLPMYGCTDATQDLKEGGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKP 564 ++ISSA V T NRAS A A++VAPFTGLKSS+ FP T KTNNDITSIASNGGRV CM+VWPP G KK ETLSYLPPL++E L KE+ YLIR GWIPCLEFELEKG+VYRE+H+SP YYDGRYWTMW+LP++G TD++Q LKE + + EYP SF+RIIGFDN RQVQCISFIA P Sbjct: 2 ALISSAAVTTVNRASSAQANLVAPFTGLKSSAGFPVTKKTNNDITSIASNGGRVNCMQVWPPVGKKKFETLSYLPPLTEEQLAKEVEYLIRKGWIPCLEFELEKGFVYRENHRSPGYYDGRYWTMWRLPLFGATDSSQVLKELADCKAEYPDSFIRIIGFDNVRQVQCISFIAHTP 177
BLAST of EY671322 vs. ExPASy Swiss-Prot
Match: RBS_MANES (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Manihot esculenta PE=2 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 8.990e-74 Identity = 131/181 (72.38%), Postives = 148/181 (81.77%), Query Frame = 1 Query: 28 MASSMISSATVATANRASLAHASMVAPFTGLKSSSAFPATNKTNNDITSIASNGGRVQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSP*YYDGRYWTMWKLPMYGCTDATQDLKEGGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 570 MASSM+S+ATVA+ NR S A A+MVAPFTGLKS+ FP T KTN+DITSI SNGG+VQCMKVWP G+KK ETLSYLPPL+ E L E+ YL+RSGWIPCLEFELE G VYREH + P YYDGRYWTMWKLPM+GCTDA Q LKE E+ K +P + RIIGFDN RQVQCISF+A KPPG Sbjct: 1 MASSMLSTATVASINRVSPAQATMVAPFTGLKSTPVFPTTRKTNSDITSITSNGGKVQCMKVWPTLGMKKFETLSYLPPLTREQLASEVEYLLRSGWIPCLEFELEHGLVYREHARVPGYYDGRYWTMWKLPMFGCTDAAQVLKELDELIKHHPDGYARIIGFDNVRQVQCISFLAYKPPG 181
BLAST of EY671322 vs. ExPASy Swiss-Prot
Match: RBS_HEVBR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Hevea brasiliensis GN=RBCS PE=2 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 1.533e-73 Identity = 133/181 (73.48%), Postives = 148/181 (81.77%), Query Frame = 1 Query: 28 MASSMISSATVATANRASLAHASMVAPFTGLKSSSAFPATNKTNNDITSIASNGGRVQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSP*YYDGRYWTMWKLPMYGCTDATQDLKEGGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 570 MASSM+S+A VA NRAS A ASMVAPFTGLKS+SAFP T KT DITSIASNGGRVQCM+VWPP G K ETLSYLPPL+ E L KE+ YL+R GW+PCLEFELE G VYRE+H+SP YYDGRYWTMWKLPM+GCTDA Q L+E E+ K YP + RIIGFDN RQVQCISF+A KP G Sbjct: 1 MASSMLSTAAVACINRASPAQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCMQVWPPRGKKFYETLSYLPPLTREQLAKEVEYLLRKGWVPCLEFELEHGTVYREYHRSPGYYDGRYWTMWKLPMFGCTDAVQVLQELDEMIKAYPDCYGRIIGFDNVRQVQCISFLAYKPKG 181
BLAST of EY671322 vs. ExPASy Swiss-Prot
Match: RBS1_SOYBN (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Glycine max GN=RBCS-1 PE=3 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 2.003e-73 Identity = 135/181 (74.59%), Postives = 147/181 (81.22%), Query Frame = 1 Query: 28 MASSMISSATVATANRASLAHASMVAPFTGLKSSSAFPATNKTNNDITSIASNGGRVQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSP*YYDGRYWTMWKLPMYGCTDATQDLKEGGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 570 MASSMISS V T NRA A MVAPFTGLKS + FP T KTNNDITSIASNGGRVQCM+VWPP G KK ETLSYLP L D L KE+ YL+R GWIPCLEFELE G+VYREH++SP YYDGRYWTMWKLPM+GCTDA+Q LKE E + YP+ F+RIIGFDN RQVQCISFIA KPPG Sbjct: 1 MASSMISSPAVTTVNRAG---AGMVAPFTGLKSMAGFP-TRKTNNDITSIASNGGRVQCMQVWPPIGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRSPXYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPG 177
BLAST of EY671322 vs. ExPASy Swiss-Prot
Match: RBS3_SOLTU (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Solanum tuberosum GN=RBCS-3 PE=3 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 4.462e-73 Identity = 131/182 (71.98%), Postives = 155/182 (85.16%), Query Frame = 1 Query: 28 MASSMISSATVATANRASLAHASMVAPFTGLKSSSAFPATNKTNN-DITSIASNGGRVQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSP*YYDGRYWTMWKLPMYGCTDATQDLKEGGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 570 MASS++SSA VAT R+++A ASMVAPFTGLKS+++FP T K NN DITS+ASNGGRV+CM+VWPP +KK ETLSYLP LSDE LLKE+ YL+++GW+PCLEFE E G+VYRE+HKSP YYDGRYWTMWKLPM+GCTDATQ L E E +K YP +++RIIGFDN RQVQCISFIA KP G Sbjct: 1 MASSIVSSAAVAT--RSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180 The following BLAST results are available for this feature:
BLAST of EY671322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >EY671322 ID=EY671322; Name=EY671322; organism=Citrus sinensis; type=EST; length=811bpback to top |