DY305485

Overview
NameDY305485
Unique NameDY305485
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1144
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5219 contig Csv1_Contig5219:470..1613. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY305485 vs. ExPASy Swiss-Prot
Match: KASC1_ARATH (3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thaliana GN=KAS1 PE=2 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 1.152e-49
Identity = 102/197 (51.78%), Postives = 124/197 (62.94%), Query Frame = 1
Query:    4 IGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLXXXXXXXXXXXXXXXRTGWIHPNINLENPDGVVDTNVLVGPKKERLEVKAAL 594
            IGLGGFVACRALSQRN+DP  ASRPWD  RDGFVM             HA KRGA I AE+ GG+   DA+HMT+P  DG+GV  CIE+ L  +GVS E+VNYINAHATST AGD+ E  A+   F    G+++N+TKSMIGH L                TGW+HP+IN  NP+  VD + +   KK+  EV  A+
Sbjct:  258 IGLGGFVACRALSQRNDDPQTASRPWDKARDGFVMGEGAGVLVMESLEHAMKRGAPIVAEYLGGAVNCDAHHMTDPRADGLGVSSCIERCLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKSTSGIKINATKSMIGHCLGAAGGLEAIATVKAINTGWLHPSINQFNPEQAVDFDTVPNEKKQH-EVDVAI 453          
BLAST of DY305485 vs. ExPASy Swiss-Prot
Match: KASC1_HORVU (3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Hordeum vulgare GN=KAS12 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 6.988e-47
Identity = 96/189 (50.79%), Postives = 116/189 (61.38%), Query Frame = 1
Query:    4 IGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLXXXXXXXXXXXXXXXRTGWIHPNINLENPDGVVDTNVLVGPKKE 570
            IGLGGFVACRALSQRN+DP  A RPWD  RDGFVM             HA KR A I AE+ GG+   DAYHMT+P  DG+GV  CI  +L  +GV+ E+VNYINAHATST AGD+ E +A+   F     +++NSTKSMIGH L                TGW+HP IN  NP+  VD + +   KK+
Sbjct:  247 IGLGGFVACRALSQRNDDPITACRPWDKERDGFVMGEGAGVLVMESLEHAMKRDAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCITMSLRDAGVAPEEVNYINAHATSTLAGDLAEVRAIKQVFKNPSEIKINSTKSMIGHCLGAAGGLEAIATIKSITTGWVHPTINQFNPEPEVDFDTVANEKKQ 435          
BLAST of DY305485 vs. ExPASy Swiss-Prot
Match: FABF_COXBU (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Coxiella burnetii GN=fabF PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 2.253e-37
Identity = 85/190 (44.74%), Postives = 107/190 (56.32%), Query Frame = 1
Query:    4 IGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLXXXXXXXXXXXXXXXRTGWIHPNINLENPDGVVDTNVLVGPKKE 570
            +G+GGF A RALS RN++P KASRPWD  RDGFV+             HAKKR A IYAE  G   + DAYHMT P P+  G   C++ +L  +G++ E V+YINAH TSTPA D  E +A+   FG +   L V+STKSM GH+L               R     P INLENPD   D + +    +E
Sbjct:  198 LGIGGFAAVRALSTRNDEPEKASRPWDKGRDGFVLGEGAACVVVEELEHAKKRNATIYAEIIGFGMSGDAYHMTRPDPEAEGFTTCMKNSLRDAGIAPERVDYINAHGTSTPAADPLEARAIKKTFGDHAYKLAVSSTKSMTGHMLGAAGALETVISVLAIRDNTAPPTINLENPDEGCDLDFVPNEARE 387          
BLAST of DY305485 vs. ExPASy Swiss-Prot
Match: FABF_SHIFL (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Shigella flexneri GN=fabF PE=3 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 2.943e-37
Identity = 84/176 (47.73%), Postives = 102/176 (57.95%), Query Frame = 1
Query:    4 IGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRG-LRVNSTKSMIGHLLXXXXXXXXXXXXXXXRTGWIHPNINLENPD 528
            +G+GGF A RALS RN++P  ASRPWD  RDGFV+             HAKKRGAKIYAE  G   +SDAYHMT P  +G G  L +  AL  +G+    + Y+NAH TSTPAGD  E QA+   FG+    + V+STKSM GHLL               R   + P INL+NPD
Sbjct:  198 LGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPD 373          
BLAST of DY305485 vs. ExPASy Swiss-Prot
Match: FABF_ECOLI (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli (strain K12) GN=fabF PE=1 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 2.943e-37
Identity = 84/176 (47.73%), Postives = 102/176 (57.95%), Query Frame = 1
Query:    4 IGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRG-LRVNSTKSMIGHLLXXXXXXXXXXXXXXXRTGWIHPNINLENPD 528
            +G+GGF A RALS RN++P  ASRPWD  RDGFV+             HAKKRGAKIYAE  G   +SDAYHMT P  +G G  L +  AL  +G+    + Y+NAH TSTPAGD  E QA+   FG+    + V+STKSM GHLL               R   + P INL+NPD
Sbjct:  198 LGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPD 373          
BLAST of DY305485 vs. ExPASy Swiss-Prot
Match: FABF_ECOL6 (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli O6 GN=fabF PE=3 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 2.943e-37
Identity = 84/176 (47.73%), Postives = 102/176 (57.95%), Query Frame = 1
Query:    4 IGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRG-LRVNSTKSMIGHLLXXXXXXXXXXXXXXXRTGWIHPNINLENPD 528
            +G+GGF A RALS RN++P  ASRPWD  RDGFV+             HAKKRGAKIYAE  G   +SDAYHMT P  +G G  L +  AL  +G+    + Y+NAH TSTPAGD  E QA+   FG+    + V+STKSM GHLL               R   + P INL+NPD
Sbjct:  198 LGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPD 373          
BLAST of DY305485 vs. ExPASy Swiss-Prot
Match: FABF_ECO57 (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli O157:H7 GN=fabF PE=3 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 2.943e-37
Identity = 84/176 (47.73%), Postives = 102/176 (57.95%), Query Frame = 1
Query:    4 IGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRG-LRVNSTKSMIGHLLXXXXXXXXXXXXXXXRTGWIHPNINLENPD 528
            +G+GGF A RALS RN++P  ASRPWD  RDGFV+             HAKKRGAKIYAE  G   +SDAYHMT P  +G G  L +  AL  +G+    + Y+NAH TSTPAGD  E QA+   FG+    + V+STKSM GHLL               R   + P INL+NPD
Sbjct:  198 LGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPD 373          
BLAST of DY305485 vs. ExPASy Swiss-Prot
Match: FABF_VIBCH (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio cholerae GN=fabF PE=3 SV=3)

HSP 1 Score: 152.14 bits (383), Expect = 5.550e-36
Identity = 83/196 (42.35%), Postives = 112/196 (57.14%), Query Frame = 1
Query:    4 IGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQ--NRGLRVNSTKSMIGHLLXXXXXXXXXXXXXXXRTGWIHPNINLENPDGVVDTNVL--VGPKKERLE 579
            +G+ GF A +ALS RN++P KASRPWD +RDGFV+             HAK RGAKIYAE  G   + DAYHMT P  DG G  L +E A+  +GV+ E + Y+NAH TSTPAGD+ E + +    G+   + + V+STKSM GHLL                   + P INL+NP+  +  +++  V  K E +E
Sbjct:  198 LGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAGIMVLEEYEHAKARGAKIYAEVVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEVKGIKRALGEAGTKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQMVPPTINLDNPEEGLGVDLVPHVARKVESME 393          
BLAST of DY305485 vs. ExPASy Swiss-Prot
Match: FABF_VIBHA (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio harveyi GN=fabF PE=3 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 3.977e-34
Identity = 77/185 (41.62%), Postives = 106/185 (57.30%), Query Frame = 1
Query:    4 IGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQ--NRGLRVNSTKSMIGHLLXXXXXXXXXXXXXXXRTGWIHPNINLENPDGVVDTNVL 552
            +G+ GF A +ALS RN++P KASRPWD  RDGFV+             HAK RGAKIYAE  G   + DAYHMT P  DG G  L +E A+  + ++   V Y+NAH TSTPAGD+ E + +    G+  ++ + V+STKSM GHLL                   + P INL++P+  +D +++
Sbjct:  198 LGMAGFGAAKALSTRNDEPQKASRPWDKGRDGFVLGDGAGVMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDANITGTQVGYVNAHGTSTPAGDVAEIKGVKRALGEEGSKQVLVSSTKSMTGHLLGAAGSVEAIITVLSLVDQIVPPTINLDDPEEGLDIDLV 382          
BLAST of DY305485 vs. ExPASy Swiss-Prot
Match: FABF_SYNY3 (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Synechocystis sp. (strain PCC 6803) GN=fabF PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 9.797e-33
Identity = 82/189 (43.39%), Postives = 101/189 (53.44%), Query Frame = 1
Query:    4 IGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLXXXXXXXXXXXXXXXRTGWIHPNINLENPDGVVDTNVLVGPKK 567
            +   GF + RALS RN+DP  ASRP+D +RDGFVM              A  RGAKIY E  G + T DAYH+T P PDG G    I  AL  SG+  E V+YINAH TSTPA D+ E +A+    G +   + V+STKSM GHLL                   + P INLENPD   D + + G  +
Sbjct:  201 LSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVPGQSR 389          
The following BLAST results are available for this feature:
BLAST of DY305485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
KASC1_ARATH1.152e-4951.783-oxoacyl-[acyl-carrier-protein] synthase I, chlor... [more]
KASC1_HORVU6.988e-4750.793-oxoacyl-[acyl-carrier-protein] synthase I, chlor... [more]
FABF_COXBU2.253e-3744.743-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Cox... [more]
FABF_SHIFL2.943e-3747.733-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Shi... [more]
FABF_ECOLI2.943e-3747.733-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Esc... [more]
FABF_ECOL62.943e-3747.733-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Esc... [more]
FABF_ECO572.943e-3747.733-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Esc... [more]
FABF_VIBCH5.550e-3642.353-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vib... [more]
FABF_VIBHA3.977e-3441.623-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vib... [more]
FABF_SYNY39.797e-3343.393-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Syn... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AF10RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305485 ID=DY305485; Name=DY305485; organism=Citrus sinensis; type=EST; length=1144bp
GCCATTGGGTTGGGAGGTTTTGTGGCATGCAGAGCACTTTCACAGAGGAA
CAACGATCCTACCAAAGCTTCTCGCCCTTGGGATATTAATCGTGATGGAT
TTGTCATGGGGGAAGGAGCTGGCGTTCTGCTTTTAGAAGAATTAGAGCAT
GCTAAGAAAAGAGGTGCAAAAATCTATGCAGAATTTCGTGGTGGAAGCTT
CACCTCTGATGCTTATCATATGACTGAACCACACCCTGATGGGGTTGGTG
TAATTCTCTGCATAGAGAAGGCATTAGCACATTCTGGGGTCTCCAGGGAA
GATGTAAATTATATAAATGCACATGCAACATCCACACCAGCTGGAGACAT
TAAAGAATATCAAGCTCTTATTCATTGTTTTGGCCAGAATCGTGGGTTAA
GGGTAAACTCAACAAAATCTATGATTGGTCACTTACTGGGAGCAGCTGGA
GCTGTAGAAGCCATTGCAGTTGTGCAGGCAATAAGGACAGGGTGGATTCA
TCCAAATATCAACCTGGAAAACCCAGATGGAGTAGTGGACACGAATGTGC
TTGTGGGCCCAAAGAAAGAGAGACTAGAGGTTAAGGCAGCATTGTCTAAC
TCATTTGGATTTGGCGGCCACAATTCATCAATCATTTTTTCTCCATACAA
GTAAATTAGTTGTGGTGTTACCACTCCTAACTGTTGCTGTATGATGCTTA
AGAGTACTAAGACAAATTTCATGATATATGATGTCCATTCCAATGTGACA
TGTTATGCTTCTTTGGTTGGACAGTAGATGGCATAAAACTGATGAACAGC
TGGAGACTTTGGAAAATGGCACTAGAAAATTTTAAGAAGTGATTATTGTT
GAATTTTATAGCCCTCNNCCTCTTNNTNCNTTTTCTTTTTTTCCTTNTTT
TTTTCCCCCCCTNCCTTTCCTTTTTTCTTCCCTTCCCCCTTTTTCCCTTC
CCCCTCTTCCCTTTTTTTTTTTTCCTCTTTCTTTTTTTNCTTCCCTTTCC
TCCTCCCCTTTTTTCCCCCCTTTTTTTTTTTTTTNNTTTTTTTTCCCCCC
CCCTTTTTCCCTTNCCTTTTCTTTTTTTTTTTCCCCCCCCNCCCCCCNCT
NTTTTTTTTCCCCTCCCTNNNNNNNNNNNNNNNTNNTNTTNCCC
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