EY671231

Overview
NameEY671231
Unique NameEY671231
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY671231 vs. ExPASy Swiss-Prot
Match: RFS2_ARATH (Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana GN=RFS2 PE=2 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 1.354e-62
Identity = 115/161 (71.43%), Postives = 131/161 (81.37%), Query Frame = 2
Query:  176 MTVTPNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPMGVLEDLRFMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGE*IVANKKLYGLSYM 658
            MT+T NIS+ + NLVV GKTILT +PDNIILTP  G G V+G+FIGAT   SKSLHVFP+GVLE LRFMCCFRFKLWWMTQRMG+CGKD+PLETQFML+ESKD  E + DD PT+YTVFLPLLEGQFR+ LQGNE NEIEIC ESG+  V   +   L Y+
Sbjct:    1 MTITSNISVQNDNLVVQGKTILTKIPDNIILTPVTGNGFVSGSFIGATFEQSKSLHVFPIGVLEGLRFMCCFRFKLWWMTQRMGSCGKDIPLETQFMLLESKDEVEGNGDDAPTVYTVFLPLLEGQFRAVLQGNEKNEIEICFESGDKAVETSQGTHLVYV 161          
BLAST of EY671231 vs. ExPASy Swiss-Prot
Match: RFS6_ARATH (Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana GN=RFS6 PE=2 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 6.749e-46
Identity = 88/153 (57.52%), Postives = 111/153 (72.55%), Query Frame = 2
Query:  176 MTVTPNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPMGVLEDLRFMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNS--ESDQDDG----PTIYTVFLPLLEGQFRSALQGNENNEIEICLESGE 616
            MT+ P + ISDGNL++  +TILTGVPDN+I T  +  G V G F+GA  +  +S H+ P+G L + RFM CFRFKLWWM QRMG  G+D+P ETQF+LVES D S  ESD  +G      +YTVFLPL+EG FRS LQGN N+E+E+CLESG+
Sbjct:    1 MTIKPAVRISDGNLIIKNRTILTGVPDNVITTSASEAGPVEGVFVGAVFNKEESKHIVPIGTLRNSRFMSCFRFKLWWMAQRMGEMGRDIPYETQFLLVESNDGSHLESDGANGVECNQKVYTVFLPLIEGSFRSCLQGNVNDEVELCLESGD 153          
BLAST of EY671231 vs. ExPASy Swiss-Prot
Match: RFS1_ARATH (Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana GN=RFS1 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.565e-45
Identity = 86/147 (58.50%), Postives = 110/147 (74.83%), Query Frame = 2
Query:  176 MTVTPNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPMGVLEDLRFMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGE 616
            MTV   IS++D +LVV G  +L GVP+N+++TP +G  L+ GAFIG T+  + S  VF +G LEDLRFMC FRFKLWWMTQRMGT GK++P ETQF++VE+   S+    D  + Y VFLP+LEG FR+ LQGNE NE+EICLESG+
Sbjct:    1 MTVGAGISVTDSDLVVLGHRVLHGVPENVLVTPASGNALIDGAFIGVTSDQTGSHRVFSLGKLEDLRFMCVFRFKLWWMTQRMGTNGKEIPCETQFLIVEANQGSDLGGRDQSSSYVVFLPILEGDFRAVLQGNEANELEICLESGD 147          
BLAST of EY671231 vs. ExPASy Swiss-Prot
Match: RFS5_ARATH (Probable galactinol--sucrose galactosyltransferase 5 OS=Arabidopsis thaliana GN=RFS5 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.028e-23
Identity = 59/167 (35.33%), Postives = 92/167 (55.09%), Query Frame = 2
Query:  185 TPNISISDGNLVVHGKTILTGVPDNIILTPG------NGVGL--VAGAFIGATAS-HSKSLHVFPMGVLEDLRFMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGE*IVANKKLYGLSYM 658
            T    + D  L+ +G+ +LT VP N+ LT        +GV L   AG+FIG       KS HV  +G L+++RFM  FRFK+WW T  +G+ G+D+  ETQ ++++   +           Y + LPLLEG FRS+ Q  E++++ +C+ESG   V   +   + Y+
Sbjct:   19 TEKFRLEDSTLLANGQVVLTDVPVNVTLTSSPYLVDKDGVPLDVSAGSFIGFNLDGEPKSHHVASIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDIENETQIIILDQSGSDSGPGSGSGRPYVLLLPLLEGSFRSSFQSGEDDDVAVCVESGSTEVTGSEFRQIVYV 185          
BLAST of EY671231 vs. ExPASy Swiss-Prot
Match: RFS_ORYSJ (Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp. japonica GN=RFS PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.984e-22
Identity = 59/150 (39.33%), Postives = 82/150 (54.67%), Query Frame = 2
Query:  188 PNISISDGNLVVHGKTILTGVPDNIILTPGNGV-------GLVAGAFIGATASHSKSLHVFPMGVLEDLRFMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFLPLLEGQFRSALQ-GNENNEIEICLESG 613
            P  ++   +L V G   L  VP NI LTP + +          AG+F+G  A  +K  HV P+G L D RFM  FRFK+WW T  +GT G+DV  ETQ M+++      S    GP  Y + LP++EG FR+ L+ G   + + + LESG
Sbjct:   26 PRFTLKGKDLAVDGHPFLLDVPANIRLTPASTLVPNSDVPAAAAGSFLGFDAPAAKDRHVVPIGKLRDTRFMSIFRFKVWWTTHWVGTNGRDVENETQMMILDQSGTKSS--PTGPRPYVLLLPIVEGPFRACLESGKAEDYVHMVLESG 173          
BLAST of EY671231 vs. ExPASy Swiss-Prot
Match: RFS_PEA (Galactinol--sucrose galactosyltransferase OS=Pisum sativum GN=RFS PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.621e-15
Identity = 52/165 (31.52%), Postives = 81/165 (49.09%), Query Frame = 2
Query:  185 TPNISIS---DGNLVVHGKTILTGVPDNIILTP-------------------GNGVGLVAGAFIGATASHSKSLHVFPMGVLEDLRFMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLESG 613
            +P +SIS     N +V+G   LT VP NI  T                     N      G F+G   + +KS HV P+G L+ ++F   FRFK+WW T  +GT G ++  ETQ ++++   +           Y + LP+LE  FR++LQ   N+ +++ +ESG
Sbjct:   24 SPLLSISLDQSRNFLVNGHPFLTQVPPNITTTTTSTPSPFLDFKSNKDTIANNNNTLQQQGCFVGFNTTEAKSHHVVPLGKLKGIKFTSIFRFKVWWTTHWVGTNGHELQHETQILILDKNISLGRP-------YVLLLPILENSFRTSLQPGLNDYVDMSVESG 181          
BLAST of EY671231 vs. ExPASy Swiss-Prot
Match: RFS4_ARATH (Probable galactinol--sucrose galactosyltransferase 4 OS=Arabidopsis thaliana GN=RFS4 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.588e-13
Identity = 50/181 (27.62%), Postives = 79/181 (43.65%), Query Frame = 2
Query:  170 SKMTVTPN-ISISDGNLVVHGKT-ILTGVPDNIILTPGNGVGLVA----------------GAFIGATASHSKSLHVFPMGVLEDLRFMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGE*IVANKKLYGLSYM 658
            +K  + PN  ++S+G+L     T IL  VP N+  TP +   +                  G F+G T           +G  ED  F+  FRFK+WW T  +G  G D+  ETQ+++++  +            Y   +P +EG FR++L   E   + IC ESG   V       ++Y+
Sbjct:   25 TKPILQPNSFNLSEGSLCAKDSTPILFDVPQNVTFTPFSSHSISTDAPLPILLRVQANAHKGGFLGFTKESPSDRLTNSLGRFEDREFLSLFRFKMWWSTAWIGKSGSDLQAETQWVMLKIPEIDS---------YVAIIPTIEGAFRASLTPGEKGNVLICAESGSTKVKESSFKSIAYI 196          
The following BLAST results are available for this feature:
BLAST of EY671231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
RFS2_ARATH1.354e-6271.43Probable galactinol--sucrose galactosyltransferase... [more]
RFS6_ARATH6.749e-4657.52Probable galactinol--sucrose galactosyltransferase... [more]
RFS1_ARATH2.565e-4558.50Probable galactinol--sucrose galactosyltransferase... [more]
RFS5_ARATH8.028e-2335.33Probable galactinol--sucrose galactosyltransferase... [more]
RFS_ORYSJ3.984e-2239.33Galactinol--sucrose galactosyltransferase OS=Oryza... [more]
RFS_PEA1.621e-1531.52Galactinol--sucrose galactosyltransferase OS=Pisum... [more]
RFS4_ARATH2.588e-1327.62Probable galactinol--sucrose galactosyltransferase... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-096-G08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY671231 ID=EY671231; Name=EY671231; organism=Citrus sinensis; type=EST; length=870bp
TGCCCGACCCACGCGTCCGAGCGCTTGTCCTTCGCTTTCTTTTTCTTTCA
TTTTCCTCTCACAGAAGAGAGCATTCCGTTGCGACGTGGAATCTCTCACT
ATCTCTTTAGAGCTCTCAACGAAAGAGTAATTTCGTCTCCCGTCGTACTT
ATTATCCGTTCTTAGGCGCTCGAAAATGACGGTAACGCCGAACATCTCCA
TCAGTGATGGAAACTTGGTGGTTCATGGCAAGACCATACTCACTGGAGTG
CCCGACAACATTATTCTGACTCCCGGTAATGGCGTGGGGCTCGTTGCCGG
TGCTTTCATCGGTGCCACGGCTTCTCATAGCAAAAGCCTCCATGTCTTTC
CCATGGGTGTCTTAGAGGATCTCCGGTTTATGTGTTGCTTCCGATTTAAG
TTATGGTGGATGACCCAGAGGATGGGTACATGCGGAAAAGATGTACCACT
GGAGACTCAATTCATGCTTGTGGAGAGCAAGGATAACTCTGAAAGTGATC
AGGATGACGGCCCAACTATCTACACTGTATTCCTTCCTCTCCTTGAAGGC
CAGTTCCGTTCCGCGCTGCAAGGCAATGAAAACAATGAGATAGAGATCTG
CCTTGAGAGTGGTGAGTAGATCGTGGCCAACAAAAAATTATATGGTCTAA
GCTACATGCATCTGGCCTGCCATATCATTATCTAGTGCCTTATCTATGGT
CATTCAATCGCATCCTGCCTGCGTTAATGGAGTCCCATTTATCGGGCATT
TATGAGGGAGACAAGAATCTTGAGAGTATGGGGGGGAGGCTGGCATGGAG
AGAGGCCCACAGGGAATGTGGAAAGAGATCGCTGGGCCCGACGAGTTCCA
GAGGGGTGACTGAAGGGGGT
back to top