EY671227

Overview
NameEY671227
Unique NameEY671227
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY671227 vs. ExPASy Swiss-Prot
Match: INT2_ARATH (Probable inositol transporter 2 OS=Arabidopsis thaliana GN=INT2 PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 6.658e-16
Identity = 25/51 (49.02%), Postives = 40/51 (78.43%), Query Frame = 2 
Query:  140 TWTF*YCGVLSVAALLFVLIFGPDTEGLPVEDIENTLDVRALHFELWEKRS 292
            +WTF   GV+SV ALLFV++  P+T+G+P+E+IE  L+ R++ F+ W+K+S
Sbjct:  520 SWTFLIFGVISVIALLFVMVCVPETKGMPMEEIEKMLERRSMEFKFWKKKS 570

HSP 2 Score: 45.0542 bits (105), Expect = 6.658e-16
Identity = 23/37 (62.16%), Postives = 27/37 (72.97%), Query Frame = 1 
Query:   46 GNAGGIPATGCWISILVLGRSFLSLTQAIGTYVDFLI 156
            G  GGI AT  WIS L++ +SFLSLT+AIGT   FLI
Sbjct:  489 GICGGIAATANWISNLIVAQSFLSLTEAIGTSWTFLI 525
The following BLAST results are available for this feature:
BLAST of EY671227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
INT2_ARATH6.658e-1649.02Probable inositol transporter 2 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-096-G03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY671227 ID=EY671227; Name=EY671227; organism=Citrus sinensis; type=EST; length=881bp
CCACGCGTCCGGGGAATTCTCGGTTCTCTCCTGGACGTGTCCGAGGGGAA
TGCTGGAGGAATACCCGCCACTGGCTGCTGGATATCTATCCTCGTCCTGG
GACGATCCTTCCTATCTTTGACACAAGCAATCGGAACATACGTGGACTTT
CTGATATTGTGGAGTGCTTTCTGTCGCAGCCTTGCTCTTTGTACTGATTT
TTGGTCCGGACACTGAGGGACTTCCCGTTGAGGATATTGAGAACACGCTG
GATGTACGAGCTCTGCATTTCGAGCTCTGGGAGAAGAGATCCCTACGGGA
CAAGAGCCAATCTGTGCGATCTATATTTTTTGTGTCAAACTCTGATACGG
AGAGAGCTCGATAGCAAATCCTGGATATTGCTCAGTGTAGTGCCTCAGAG
ATGTAATATTCTGAACCTGGGACCGGCCTCCTAATAGAATAAACATATTC
AAGACTTTCTGGGAAAAGGAGTAGAACCGCCGCAATCACCGAAGAAGGAC
AAGGAACTCGCTGAGGAAGAAAAAGGGGGAGGGCGGCCCCAGAGGGCCCG
AGGTTAGTGACCGCGGGAGAGCGCCCGCCGCAGCCTCTTCTCAAAGGGCG
CCCTAATACTGGCGCCGGGGGGGGGTGATTTAACACCCTCCTTACGTGGA
AAACCCTCCGTGGTAACCCGAGCGTAGGGGGGCTGGACGAGTTCCCCGTT
TGGGCCGCTGGGGCAGTAGGGAGAGACGCCCCAGCGGATTGTCTTGCCCA
AAGCGGGGGGCGGCGGGGGGGGCGAAGGGGGCGCGGGGGGGAGAGGGGGC
GTCGCCCGGCGGGCGTGTGCGGGAGGAGGAACGGGGAGGGGGCGCCGGGG
CGGCGGGGGGGGGGTGGGTGGCCTAGCCCGC
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