EY671223

Overview
NameEY671223
Unique NameEY671223
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY671223 vs. ExPASy Swiss-Prot
Match: DAG_ANTMA (DAG protein, chloroplastic OS=Antirrhinum majus GN=DAG PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.981e-75
Identity = 140/178 (78.65%), Postives = 148/178 (83.15%), Query Frame = 2
Query:  221 PSRAHSRSILTVRAGATDXXXXXXXXXXN----EPRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIETYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIPCTYPTYQPNKRKESKYVSKRYERPRDGPPAERR 742
            P ++ S +  TVRA  TD          N    E RETIMLPGCDYNHWLIVMEFPKDPAPTREQMI+TYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTV+EETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIPC YPTYQP + + SKY SK Y R RDGPPAE+R
Sbjct:   42 PIKSRSAAYPTVRA-LTDGEYSSRRNNNNNNSGEERETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVTEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIPCQYPTYQPKQSRSSKYKSKAYVRQRDGPPAEQR 218          
BLAST of EY671223 vs. ExPASy Swiss-Prot
Match: UMP1_ARATH (Uncharacterized protein At3g15000, mitochondrial OS=Arabidopsis thaliana GN=At3g15000 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.138e-30
Identity = 81/232 (34.91%), Postives = 128/232 (55.17%), Query Frame = 2
Query:  110 RTMATLYAPSILASKPLLSSRPQLTLGLRVGSPTLRLPSRAHSRSILTVR-----AGATDXXXXXXXXXXNEPRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIETYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIPCTYPTYQPNKRKE-------SKYVSKRYERPRDGPPA---ERRTRPAAG 760
            ++++ L+  S  +S PL  S P  +L L    P +   S      +++V+     A ++             P+ETI+L GCD+ HWL+V+E P    PTR+++I++Y+ TLA ++GS +EA+  +Y+ ST  Y  F   VSE+ S K K L  V WVLPDSY+DV+NKDYGG+ +++G+ +P     Y P   +E       +   ++R +RPR+   +   ERR    AG
Sbjct:   16 KSLSFLFTRSFASSAPLAKS-PASSL-LSRSRPLVAAFSSVFRGGLVSVKGLSTQATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVVE-PPQGEPTRDEIIDSYIKTLAQIVGSEDEARMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDSYLDVRNKDYGGEPFIDGKAVP-----YDPKYHEEWIRNNARANERNRRNDRPRNNDRSRNFERRRENMAG 239          
The following BLAST results are available for this feature:
BLAST of EY671223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
DAG_ANTMA1.981e-7578.65DAG protein, chloroplastic OS=Antirrhinum majus GN... [more]
UMP1_ARATH1.138e-3034.91Uncharacterized protein At3g15000, mitochondrial O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-096-F09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY671223 ID=EY671223; Name=EY671223; organism=Citrus sinensis; type=EST; length=919bp
TGAGGTACCGGTCCGGAATCCCGTTCCGACCACGCGTCCGCTCTCAACAT
TTTCGGATTTTCTCCTCTCGTTATCTTGGCAGCTTGGCTTTGGCACCAGC
AGCAGCAAGAGAACAATGGCGACTCTGTACGCACCATCAATCCTCGCATC
CAAACCCCTCCTCTCATCTCGCCCTCAACTCACTCTGGGCCTCCGAGTCG
GCTCACCGACTCTCCGCCTCCCATCTCGCGCTCACTCGCGCTCGATCTTG
ACCGTCAGAGCTGGGGCAACGGACAGCGAGTACTCGTCCAAGAGAAGCAG
CAGCAATGAGCCGAGGGAGACGATTATGTTACCGGGATGTGACTACAACC
ACTGGCTTATTGTCATGGAGTTCCCCAAGGACCCTGCTCCCACGAGAGAG
CAGATGATTGAAACTTATCTCAATACTCTTGCCACTGTTCTTGGAAGCAT
GGAAGAAGCAAAGAAGAATATGTATGCTTTTAGCACCACTACTTACACTG
GATTCCAATGCACAGTATCCGAAGAAACCTCAGAGAAATTCAAAGGCCTG
CCTGGTGTTCTTTGGGTGTTGCCCGATTCATACATAGATGTCAAAAATAA
AGATTATGGAGGTGATAAATATGTCAATGGAGAGATCATTCCCTGCACAT
ATCCCACTTATCAGCCAAACAAACGAAAAGAATCAAAATATGTGAGCAAA
AGATATGAGAGACCAAGAGATGGCCCTCCTGCTGAAAGAAGAACGAGACC
AGCAGCTGGGCAGGCAAAAACAGCGTCGTCATAAGTTTGCGACTCCAAAA
GCCATCATACTACGTGCCCCATGCGGATCAGCAGTCTAATAAGAACCCTG
GTTTATAAGTTCTCAAGCTGGTCTTGGGAGTTTTTGGAAGGGAGACGCTT
AATGTACGTAGGATAAAAA
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