DY257584

Overview
NameDY257584
Unique NameDY257584
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1297
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6634 contig Csv1_Contig6634:1..1297. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY257584 vs. ExPASy Swiss-Prot
Match: MO25N_ARATH (Putative MO25-like protein At5g47540 OS=Arabidopsis thaliana GN=At5g47540 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.045e-41
Identity = 95/165 (57.58%), Postives = 116/165 (70.30%), Query Frame = 3
Query:  216 SKR*YNKQVTSRNNKNIN*ILYDNTESEPDSKACAQLTAQFFRENTLRL*IA*HQKMNSEARKDATQVAANLQRQQVHSKLIASDYLKPKIHLLDILIAGNENTDMPLHYGAMPRKCIRHQNVATYVVEPQHKKKVFDIKQLPNI*NSLQSCCHY--LRTRRKGT 704
            SKR       SRN +++  ILY N+E+EP ++ACAQLT +FF+E+TLRL I    K+N E RKDATQV ANLQRQQV+S+LIASDYL+  I L+D+LI G ENTDM LHYGAM R+CIRHQ VA YV+E  H KK FD  QLPN   +  +   +  L TR K T
Sbjct:   38 SKRDEKMAELSRNIRDMKSILYGNSEAEPVAEACAQLTQEFFKEDTLRLLITCLPKLNLETRKDATQVVANLQRQQVNSRLIASDYLEANIDLMDVLIEGFENTDMALHYGAMFRECIRHQIVAKYVLESDHVKKFFDYIQLPNFDIAADAAATFKELLTRHKST 202          
BLAST of DY257584 vs. ExPASy Swiss-Prot
Match: MO25M_ARATH (Putative MO25-like protein At4g17270 OS=Arabidopsis thaliana GN=At4g17270 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.726e-36
Identity = 85/165 (51.52%), Postives = 112/165 (67.88%), Query Frame = 3
Query:  216 SKR*YNKQVTSRNNKNIN*ILYDNTESEPDSKACAQLTAQFFRENTLRL*IA*HQKMNSEARKDATQVAANLQRQQVHSKLIASDYLKPKIHLLDILIAGNENTDMPLHYGAMPRKCIRHQNVATYVVEPQHKKKVFDIKQLPNI*NSLQSCCHY--LRTRRKGT 704
            SKR       S++ +++  ILY N+E+EP ++ACAQLT +FF+ +TLR  +     +N EARKDATQV ANLQRQQV+S+LIA+DYL+  I L+D L+ G ENTDM LHYG M R+CIRHQ VA YV++ +H KK F   QLPN   +  +   +  L TR K T
Sbjct:   38 SKREEKMVELSKSIRDLKLILYGNSEAEPVAEACAQLTQEFFKADTLRRLLTSLPNLNLEARKDATQVVANLQRQQVNSRLIAADYLESNIDLMDFLVDGFENTDMALHYGTMFRECIRHQIVAKYVLDSEHVKKFFYYIQLPNFDIAADAAATFKELLTRHKST 202          
BLAST of DY257584 vs. ExPASy Swiss-Prot
Match: MO25L_ARATH (MO25-like protein At2g03410 OS=Arabidopsis thaliana GN=At2g03410 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 4.262e-27
Identity = 67/155 (43.23%), Postives = 100/155 (64.52%), Query Frame = 3
Query:  249 RNNKNIN*ILYDNTESEPDSKACAQLTAQFFRENTLRL*IA*HQKMNSEARKDATQVAANLQRQQVHSKLIASDYLKPKIHLLDILIAG-NENTDMPLHYGAMPRKCIRHQNVATYVVEPQHKKKVFDIKQLP--NI*NSLQSCCHYLRTRRKGT 704
            RN +++  ILY N E+EP  +AC  LT +FFR +TLR  I    K++ EARKDATQ+ ANLQ+QQV  +L+AS+YL+  + ++D L+ G + + ++ LHY  M ++C+RHQ VA Y++E ++ +K FD  QLP  ++          L TR K T
Sbjct:   49 RNIRDLKSILYGNGEAEPVPEACLLLTQEFFRADTLRPLIKSIPKLDLEARKDATQIVANLQKQQVEFRLVASEYLESNLDVIDSLVEGIDHDHELALHYTGMLKECVRHQVVAKYILESKNLEKFFDYVQLPYFDVATDASKIFRELLTRHKST 203          
BLAST of DY257584 vs. ExPASy Swiss-Prot
Match: CAB39_HUMAN (Calcium-binding protein 39 OS=Homo sapiens GN=CAB39 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.303e-11
Identity = 36/118 (30.51%), Postives = 68/118 (57.63%), Query Frame = 3
Query:  246 SRNNKNIN*ILYDNTESEPDSKACAQLTAQFFRENTLRL*IA*HQKMNSEARKDATQVAANLQRQQVHSKLIASDYLKPKIHLLDILIAGNENTDMPLHYGAMPRKCIRHQNVATYVV 599
            S+N   +  ILY   E EP ++A AQL  + +    L   +A  Q ++ E +KD  Q+  N+ R+Q+ ++    +Y+  + ++L +L+ G E+ ++ L+ G M R+CIRH+ +A  ++
Sbjct:   44 SKNLVAMKEILYGTNEKEPQTEAVAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIIL 161          
BLAST of DY257584 vs. ExPASy Swiss-Prot
Match: CAB39_BOVIN (Calcium-binding protein 39 OS=Bos taurus GN=CAB39 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.303e-11
Identity = 36/118 (30.51%), Postives = 68/118 (57.63%), Query Frame = 3
Query:  246 SRNNKNIN*ILYDNTESEPDSKACAQLTAQFFRENTLRL*IA*HQKMNSEARKDATQVAANLQRQQVHSKLIASDYLKPKIHLLDILIAGNENTDMPLHYGAMPRKCIRHQNVATYVV 599
            S+N   +  ILY   E EP ++A AQL  + +    L   +A  Q ++ E +KD  Q+  N+ R+Q+ ++    +Y+  + ++L +L+ G E+ ++ L+ G M R+CIRH+ +A  ++
Sbjct:   44 SKNLVAMKEILYGTNEKEPQTEAVAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIIL 161          
BLAST of DY257584 vs. ExPASy Swiss-Prot
Match: CAB39_MOUSE (Calcium-binding protein 39 OS=Mus musculus GN=Cab39 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.538e-11
Identity = 36/118 (30.51%), Postives = 68/118 (57.63%), Query Frame = 3
Query:  246 SRNNKNIN*ILYDNTESEPDSKACAQLTAQFFRENTLRL*IA*HQKMNSEARKDATQVAANLQRQQVHSKLIASDYLKPKIHLLDILIAGNENTDMPLHYGAMPRKCIRHQNVATYVV 599
            S+N   +  ILY   E EP ++A AQL  + +    L   +A  Q ++ E +KD  Q+  N+ R+Q+ ++    +Y+  + ++L +L+ G E+ ++ L+ G M R+CIRH+ +A  ++
Sbjct:   44 SKNLVAMKEILYGTNEKEPQTEAVAQLAQELYNSGLLGTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIIL 161          
The following BLAST results are available for this feature:
BLAST of DY257584 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
MO25N_ARATH1.045e-4157.58Putative MO25-like protein At5g47540 OS=Arabidopsi... [more]
MO25M_ARATH1.726e-3651.52Putative MO25-like protein At4g17270 OS=Arabidopsi... [more]
MO25L_ARATH4.262e-2743.23MO25-like protein At2g03410 OS=Arabidopsis thalian... [more]
CAB39_HUMAN7.303e-1130.51Calcium-binding protein 39 OS=Homo sapiens GN=CAB3... [more]
CAB39_BOVIN7.303e-1130.51Calcium-binding protein 39 OS=Bos taurus GN=CAB39 ... [more]
CAB39_MOUSE9.538e-1130.51Calcium-binding protein 39 OS=Mus musculus GN=Cab3... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK3BC09FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257584 ID=DY257584; Name=DY257584; organism=Citrus sinensis; type=EST; length=1297bp
AAACACATGAACATTATGGAGAACCAAGGAACGCCACCATCCAACCTCCC
TATATCAACTAAAACAATTCAAGCTCTTACAAATGTTGAAGCATTTGTTC
TTATGGCAGATGATTTAAAGCAGGTACTAATGAATATTGATCACTAACCA
AAAAAAAAAAAAAACAAAAACACCATCCTTTCATGTACAACGATGGCATC
ACAAAAGAGCATGGCTCAAAACGTTAATACAACAAACAGGTAACAAGCAG
AAACAACAAGAACATTAATTGAATACTTTATGACAATACTGAATCTGAGC
CAGATTCAAAGGCATGTGCACAATTGACTGCACAGTTCTTCAGGGAAAAC
ACGCTACGGCTTTAGATAGCTTGACATCAAAAGATGAACTCGGAGGCAAG
GAAAGATGCCACTCAGGTTGCAGCTAATTTACAGAGGCAACAAGTTCACT
CAAAGTTGATTGCCTCTGACTACTTAAAACCAAAAATACATCTTTTGGAT
ATTCTGATAGCTGGCAATGAAAACACAGACATGCCTTTACATTATGGTGC
TATGCCCAGGAAGTGTATTCGACATCAAAATGTTGCAACATATGTGGTGG
AACCCCAACACAAGAAAAAAGTTTTTGACATAAAACAGCTTCCAAATATA
TGAAATAGCCTGCAAAGCTGCTGCCACTATTTAAGGACACGGCGAAAAGG
GACCAAAACCCCCTGGGGCCTAATTTCCTTTCAAAAATAATAACTGGGTT
TTTAGCAAAAAAAAACCCCAAACTGTGGAAACCTTCCAATACATTTAACA
AAAAAAAACTTGGCCAAGCGGGGGGAGAACTAATTACCGGCAGCCGGCCA
AATCCAGCAATCAAGAAAACCAAACGCGGAGCCCCACGGCAAAATTTGGA
CGGAATCTCCCTCAACCTCCCTAAAAAAAACCCCACAAAAAAATACTCCA
AACACAAGCAATTCTCTGGTTTATCAATCTGTGAGCGGAGAAAAAAAAAA
CAAAACCCCCCCAAAAAAATAAAAAAAACCCCCTTCTCCAAAAAAAAACC
CATGCTTCTCCCACGCTGGTTTGTCCAGCTTTTACAAAATCCAAACAAAC
AGGCAAAAACACCTCTGTACACGCAACAACACCAACCCACGGGTTCTGCC
AACAGGAGAATTATGTGCTGCGCGCCTTGCCAACACACAACACACCCCCC
CTCCCCCCCACCCACACCTAGCTCCCTAACCTCCACTCCATCCCCCACCC
ATTGCACAAAGCACCCCTCTCCTCTCCTCGTTGGCTGGCCCTTAATT
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