DY257550

Overview
NameDY257550
Unique NameDY257550
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1159
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY257550_ssr160 microsatellite DY257550_ssr160:160..169. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY257550 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 2.296e-37
Identity = 75/186 (40.32%), Postives = 116/186 (62.37%), Query Frame = 1
Query:  181 LHKNLVQILGF*DEALNRLLIYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSYGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLNVLVDSDEPAMDDR 738
            +H+NL++++G+   +  RLL+Y +M NG++A+ + A P  DWN R +I++  ARGL YLHE+C+  IIH D+K  NILLD YF A + DFGL+KLL  + S   T +RGT G++APE+      S K DV+ +G++LLE+I   R++E       +  + +W    + E ++  LVD +     DR
Sbjct:  352 VHRNLLRLIGYCASSSERLLVYPYMSNGSVASRLKAKPALDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLAKLLNHEDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSVSQKGAMLEWVRKLHKEMKVEELVDRELGTTYDR 537          
BLAST of DY257550 vs. ExPASy Swiss-Prot
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 5.656e-36
Identity = 80/154 (51.95%), Postives = 107/154 (69.48%), Query Frame = 1
Query:  184 HKNLVQILGF*DEALNRLLIYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLL---SDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSYGVMLLEIICCRRSVEM 627
            H NLV+I GF  E  +RLL+ E++ NG+LAN++F+       DW  R  I+L +A+GL YLH EC   +IHCD+KP+NILLD  F  KI+DFGL KLL    S Q+ +H  +RGT GY+APEW  + P++AKVDVYSYGV+LLE++   R  E+
Sbjct:  586 HMNLVRIWGFCSEGSHRLLVSEYVENGSLANILFSEGGNILLDWEGRFNIALGVAKGLAYLHHECLEWVIHCDVKPENILLDQAFEPKITDFGLVKLLNRGGSTQNVSH--VRGTLGYIAPEWVSSLPITAKVDVYSYGVVLLELLTGTRVSEL 737          
BLAST of DY257550 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.067e-34
Identity = 91/219 (41.55%), Postives = 133/219 (60.73%), Query Frame = 1
Query:  184 HKNLVQILGF*DEALNRLLIYEFMGNGTLANLIFAIPKPD---WNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEWFKNAPVSAKVDVYSYGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLNVLVDSDEPAMDDRKRCKNG*RKQCG--GI*KESSKKPTMKGVL 822
            HKNLV++LGF +E    +L+YEF+ N +L + IF   K     W +R RI   IARGL+YLHE+  + IIH D+K  NILLD   + K++DFG ++L  SD++R  T  I GTRGY+APE+  +  +SAK DVYS+GVMLLE+I   R+   E E      L  +A+  + EG+  +++D   P + +  R +     Q G   + + S+K+PTM  V+
Sbjct:  401 HKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEDKRSLLTWEVRFRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGERNNSFEGEG-----LAAFAWKRWVEGKPEIIID---PFLIENPRNEIIKLIQIGLLCVQENSTKRPTMSSVI 611          
BLAST of DY257550 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.393e-34
Identity = 92/237 (38.82%), Postives = 139/237 (58.65%), Query Frame = 1
Query:  184 HKNLVQILGF*DEALNRLLIYEFMGNGTLANLIFAIPKPD---WNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEWFKNAPVSAKVDVYSYGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLNVLVDSDEPAMDDRKRCKNG*RKQCG--GI*KESSKKPTMKGVLAKVRRAFGKFQIPPWPFF 876
            H+NLV++LGF +E   ++L+YEF+ N +L + IF   K     W +R RI   IARGL+YLHE+  + IIH D+K  NILLD   + K++DFG ++L  SD++R  T  I GTRGY+APE+  +  +SAK DVYS+GVMLLE+I   R+   E E      L  +A+  + EG+  +++D   P + ++ R +     Q G   + +  +K+PTM  V+  +        +P  P F
Sbjct:  406 HRNLVKLLGFCNEGDEQILVYEFVPNSSLDHFIFDDEKRSLLTWEMRYRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGERNNSFEGEG-----LAAFAWKRWVEGKPEIIID---PFLIEKPRNEIIKLIQIGLLCVQENPTKRPTMSSVIIWLGSETNIIPLPKAPAF 634          
BLAST of DY257550 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.179e-33
Identity = 76/184 (41.30%), Postives = 111/184 (60.33%), Query Frame = 1
Query:  181 LHKNLVQILGF*DEALNRLLIYEFMGNGTLANLIFAI----PKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSYGVMLLEIICCRRSVEM-EVEEEGRAILTDWAYDCYAEGRLNVLVDSD 717
            +H+NL++++GF      RLL+Y FM N +LA+ +  I    P  DW  R RI+L  ARG  YLHE CN  IIH D+K  N+LLD  F A + DFGL+KL+   ++   T +RGT G++APE+      S + DV+ YG+MLLE++  +R+++   +EEE   +L D       E RL  +VD +
Sbjct:  343 VHRNLLRLIGFCTTQTERLLVYPFMQNLSLAHRLREIKAGDPVLDWETRKRIALGAARGFEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRRTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLGAIVDKN 526          
BLAST of DY257550 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.540e-33
Identity = 74/183 (40.44%), Postives = 109/183 (59.56%), Query Frame = 1
Query:  181 LHKNLVQILGF*DEALNRLLIYEFMGNGTLANLIF----AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSYGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLNVLVDSD 717
            +H+NL+++ GF      R+L+Y +M NG++A+ +       P  DWN R+ I+L  ARGLVYLHE+CN  IIH D+K  NILLD  F A + DFGL+KLL    S   T +RGT G++APE+      S K DV+ +GV++LE+I   + ++    +  + ++  W     AE R   +VD D
Sbjct:  352 VHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGNGQVRKGMILSWVRTLKAEKRFAEMVDRD 534          
BLAST of DY257550 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 2.627e-33
Identity = 79/194 (40.72%), Postives = 119/194 (61.34%), Query Frame = 1
Query:  160 EREIIKNL-HKNLVQILGF*DEALNRLLIYEFMGNGTLANLIF-----AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTH--TMIRGTRGYVAPEWFKNAPVSAKVDVYSYGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLNVLVDSD 717
            E E++  L H +LV ++G+ DE    +L+YE+M +GTL + +F     + P   W  R+ I +  ARGL YLH      IIH DIK  NILLD  F  K+SDFGLS++  +  S+TH  T+++GT GY+ PE+++   ++ K DVYS+GV+LLE++CC R + M+     +A L  W    Y  G ++ ++DSD
Sbjct:  563 ELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVLLEVLCC-RPIRMQSVPPEQADLIRWVKSNYRRGTVDQIIDSD 755          
BLAST of DY257550 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 2.627e-33
Identity = 76/184 (41.30%), Postives = 110/184 (59.78%), Query Frame = 1
Query:  181 LHKNLVQILGF*DEALNRLLIYEFMGNGTLANLIFAIPKP----DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSYGVMLLEIICCRRSVEM-EVEEEGRAILTDWAYDCYAEGRLNVLVDSD 717
            +H+NL+++ GF      RLL+Y +M NG++A+ +   P+     DW  R RI+L  ARGL YLH+ C+  IIH D+K  NILLD  F A + DFGL+KL+    +   T +RGT G++APE+      S K DV+ YGVMLLE+I  +R+ ++  +  +   +L DW      E +L  LVD D
Sbjct:  342 VHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVD 525          
BLAST of DY257550 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 4.481e-33
Identity = 78/191 (40.84%), Postives = 120/191 (62.83%), Query Frame = 1
Query:  184 HKNLVQILGF*DEALNRLLIYEFMGNGTLANLIFAIPKP--DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSYGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLNVLVDSD--EPAMDDRKR 744
            H+NLV++ G   E  +RLL+YE++ NG+L   +F       DW+ R  I L +ARGLVYLHEE  + I+H D+K  NILLD+    K+SDFGL+KL    ++   T + GT GY+APE+     ++ K DVY++GV+ LE++  R + +  +E+E R +L +WA++ + +GR   L+D    E  M++ KR
Sbjct:  746 HRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQALFGEKTLHLDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEDEKRYLL-EWAWNLHEKGREVELIDHQLTEFNMEEGKR 935          
BLAST of DY257550 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 4.481e-33
Identity = 74/184 (40.22%), Postives = 112/184 (60.87%), Query Frame = 1
Query:  181 LHKNLVQILGF*DEALNRLLIYEFMGNGTLANLIFAIPKP----DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSYGVMLLEIICCRRSVEM-EVEEEGRAILTDWAYDCYAEGRLNVLVDSD 717
            +H+NL+++ GF      RLL+Y +M NG++A+ +   P+     DW  R  I+L  ARGL YLH+ C+  IIH D+K  NILLD  F A + DFGL+KL+  + S   T +RGT G++APE+      S K DV+ YGVMLLE+I  +++ ++  +  +   +L DW  +   E +L  LVD++
Sbjct:  328 VHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHLDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAE 511          
The following BLAST results are available for this feature:
BLAST of DY257550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 418
Match NameE-valueIdentityDescription
Y2239_ARATH2.296e-3740.32Probable LRR receptor-like serine/threonine-protei... [more]
KPRO_MAIZE5.656e-3651.95Putative receptor protein kinase ZmPK1 OS=Zea mays... [more]
CRK40_ARATH1.067e-3441.55Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
CRK39_ARATH1.393e-3438.82Putative cysteine-rich receptor-like protein kinas... [more]
Y5129_ARATH1.179e-3341.30Probable LRR receptor-like serine/threonine-protei... [more]
Y5457_ARATH1.540e-3340.44Probable LRR receptor-like serine/threonine-protei... [more]
Y5900_ARATH2.627e-3340.72Putative receptor-like protein kinase At5g39000 OS... [more]
BAK1_ARATH2.627e-3341.30BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
Y5614_ARATH4.481e-3340.84Probable LRR receptor-like serine/threonine-protei... [more]
SERK5_ARATH4.481e-3340.22Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3AE12FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257550 ID=DY257550; Name=DY257550; organism=Citrus sinensis; type=EST; length=1159bp
GGGATTTGTTCTCTTGTGGGCAGCCGCATGAGCTCTCGAGGAATTCCGGG
AAATTGGCGTAGCAGCTGCAGCTCCCCTGTTCTCTCTGTTTTGACTGGGG
GATCCGAACTAAATTTGGAATTGCATGTAACATACCTGTATTTGTGATGC
CATTTTGAGGAGAGAGAGATTATTAAAAATCTACACAAGAATCTAGTACA
GATACTTGGATTCTGAGATGAAGCTCTCAACCGGCTTTTAATATACGAAT
TCATGGGCAATGGCACTTTGGCAAACTTAATATTTGCAATTCCAAAGCCT
GACTGGAATCTCCGAGTTCGGATTTCACTGGAAATTGCAAGAGGGCTTGT
GTACTTGCACGAAGAGTGCAATGTGCCCATCATTCACTGCGATATAAAGC
CTCAAAACATACTTCTAGATAACTATTTCAGCGCAAAAATTTCTGACTTT
GGATTATCCAAGTTGTTACTCTCTGATCAGTCTCGAACACATACCATGAT
CAGAGGAACTCGGGGATATGTGGCTCCAGAATGGTTCAAGAATGCACCTG
TCTCAGCCAAAGTGGATGTTTACAGTTATGGTGTTATGTTACTGGAAATC
ATTTGCTGTAGGAGAAGCGTGGAGATGGAAGTTGAGGAAGAAGGAAGAGC
AATATTGACTGATTGGGCCTATGATTGCTATGCTGAAGGAAGACTAAATG
TCTTGGTAGACAGTGATGAACCTGCAATGGATGACAGAAAAAGGTGCAAA
AATGGTTGAAGAAAACAATGTGGTGGCATCTAAAAAGAATCCTCGAAAAA
GCCTACAATGAAGGGGGTCCTGGCAAAGGTAAGAAGGGCTTTTGGGAAGT
TCCAAATCCCTCCCTGGCCCTTTTTCTTTCACCAAATTGCCAGTAACAGG
AAACTCGAAAGCCTACCAGGCGGAGTCATCTTCTCCTGGTGGCATAATGG
GGGAATGGGTAACTAAATCATCTTCACTTCTACAAAATCAAAAGTAAAAA
GTGTTCCTCGGCTATATACGGGGAATGAAAAACCACAACAACCACCCGAC
TCCTTGCTCTCGTTTAAAACAAAACAAAGATGCCAGAACAACAACATAAC
ATTCCCCCCTTTCCTGTGGTCCCAGACCGCGCAAACAACCTTACTCTAAA
AAGACTATA
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