CX301094

Overview
NameCX301094
Unique NameCX301094
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length634
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301094 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.313e-30
Identity = 62/140 (44.29%), Postives = 94/140 (67.14%), Query Frame = 2
Query:    2 ETWPQDPLLPQDPYERAMARFWAKFADEKLMQTAWKSTWTKGE-EKEDALKATMEALEKIEGELKGKSYFGGENKYAYLEIAIGWINYLIPIWEEIASIQFLDPKRFPAITAWKSKFLDNPLIKETLPPREKLLIYLHQR 418
            ETW  +P+LP DPY+RA+ARFW+KF D+K++    KS +T  E E+E  ++ T EAL+ +E ELK K +FGGE ++  ++IA  +I + IPI++EIA +Q    ++FP +  W  +FL++P + E LPPR+ L  Y   R
Sbjct:   79 ETWKNNPILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKEREKNVEETYEALQFLENELKDKKFFGGE-EFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLPPRDPLFAYFKAR 217          
BLAST of CX301094 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.165e-22
Identity = 50/139 (35.97%), Postives = 87/139 (62.59%), Query Frame = 2
Query:    2 ETWPQDPLLPQDPYERAMARFWAKFADEKLMQTAWKSTWTKGEEKEDALKATMEALEKIEGELKGKSYFGGENKYAYLEIAIGWINYLIPIWEEIASIQFLDPKRFPAITAWKSKFLDNPLIKETLPPREKLLIYLHQR 418
            ET+    +LP+DPY+RA+ARFWAKF D+K+     K+   KGEE+E   +   E L+ ++ ELK K +F G+ K+ + +IA   + + + ++EE + +  +  ++FP    W+ ++++   IKE+LPPR++LL +   R
Sbjct:   75 ETFEGPSILPKDPYDRALARFWAKFLDDKVPAVV-KTFLRKGEEQEKDKEEVCEMLKVLDNELKDKKFFVGD-KFGFADIAANLVAFWLGVFEEASGVVLVTSEKFPNFCKWRGEYINCSQIKESLPPRDELLAFYRSR 211          
BLAST of CX301094 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.459e-21
Identity = 47/139 (33.81%), Postives = 85/139 (61.15%), Query Frame = 2
Query:    2 ETWPQDPLLPQDPYERAMARFWAKFADEKLMQTAWKSTWTKGEEKEDALKATMEALEKIEGELKGKSYFGGENKYAYLEIAIGWINYLIPIWEEIASIQFLDPKRFPAITAWKSKFLDNPLIKETLPPREKLLIYLHQR 418
            ET+    +LP+DPY+RA+ARFWAKF D+K+      + + KGEE+E   +   E L+ ++ ELK K +F G+ K+ + +IA   + + + ++EE      +  ++FP  + W+ ++++   + E+LPPR++LL +   R
Sbjct:   75 ETFEGPSILPKDPYDRALARFWAKFLDDKVAAVV-NTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFAGD-KFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDELLAFFRAR 211          
BLAST of CX301094 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.077e-19
Identity = 45/139 (32.37%), Postives = 85/139 (61.15%), Query Frame = 2
Query:    2 ETWPQDPLLPQDPYERAMARFWAKFADEKLMQTAWKSTWTKGEEKEDALKATMEALEKIEGELKGKSYFGGENKYAYLEIAIGWINYLIPIWEEIASIQFLDPKRFPAITAWKSKFLDNPLIKETLPPREKLLIYLHQR 418
            ET+    +LP+DPY+RA+ARFW+KF  +K+      + + KGEE+E   +   E L+ ++ ELK K +F G+ K+ + +IA   + + + ++EE   +  +  ++FP  + W+ ++++   +KE+LP R++LL +   R
Sbjct:   75 ETFEGPSILPKDPYDRALARFWSKFLGDKVAAVV-NTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFVGD-KFGFADIAANLVGFWLGVFEEGYGVVLVTSEKFPNFSRWRDEYINCSQVKESLPSRDELLAFFRAR 211          
BLAST of CX301094 vs. ExPASy Swiss-Prot
Match: GSTXA_ARATH (Glutathione S-transferase 103-1A OS=Arabidopsis thaliana GN=103-1A PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.317e-17
Identity = 54/150 (36.00%), Postives = 83/150 (55.33%), Query Frame = 2
Query:    2 ETWPQDPLLPQDPYERAMARFWAKFADEKLMQTAWKSTWTKGEEKEDAL-KATMEALEKIEGELKGKSYFGGENKYAYLEIAIGWINYLIPI-----WEEIASIQFLDPKRFPAITAWKSKFLDNPLIKETLPPRE---KLLIYLHQRVK 424
            ETWPQ+P+LPQDPYER+ ARF+AK  DE++M   + S     E+  + L +   E +  +E EL GK YFGG+    +L+   G    LIP      WE I  ++ +  ++FP    W        ++K+ +PPRE   + + Y+ +RV+
Sbjct:   78 ETWPQNPILPQDPYERSKARFFAKLVDEQIMNVGFISMARADEKGREVLAEQVRELIMYLEKELVGKDYFGGKT-VGFLDFVAG---SLIPFCLERGWEGI-GLEVITEEKFPEFKRWVRNLEKVEIVKDCVPPREEHVEHMNYMAERVR 222          
BLAST of CX301094 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.831e-17
Identity = 47/134 (35.07%), Postives = 77/134 (57.46%), Query Frame = 2
Query:    2 ETWPQDPLLPQDPYERAMARFWAKFADEKLMQTAWKSTWTKGEEKEDALKATMEALEKIEGELKGKSYFGGENKYAYLEIAIGWINYLIPIWEEIASIQFLDPKRFPAITAWKSKFLDNPLIKETLPPREKLLI 403
            E +    +LP+DPY+RA+ARFWAK+ ++K     WKS ++KGEE+E A +   E L+ ++ E K K  F G+ K+ + +I        + I EE++ I     ++FP   AW+ ++      +E  P R++LLI
Sbjct:   75 EAFEGPSILPKDPYDRALARFWAKYVEDK-GAAVWKSFFSKGEEQEKAKEEAYEMLKILDNEFKDKKCFVGD-KFGFADIVANGAALYLGILEEVSGIVLATSEKFPNFCAWRDEYCTQN--EEYFPSRDELLI 204          
BLAST of CX301094 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.243e-16
Identity = 48/144 (33.33%), Postives = 81/144 (56.25%), Query Frame = 2
Query:    2 ETWPQD-PLLPQDPYERAMARFWAKFADEKLMQTAWKSTWTKGEEKEDALKATMEALEKIEGELKGKSYFGGENKYAYLEIAIGWINYLIPIWEEIASIQFLDPKRFPAITAWKSKFLDNPLIKETLPPREKLLIYLHQRVKHR 430
            E W    PLLP DPYER+ ARFWA + D+K+  T  +    KGE++E+A K  +E L+ +EGEL  K+YFGG+N   ++++A+         +E  A+  F      P +  W    +++  + ++LP   K+  ++ + +KH+
Sbjct:   77 EVWHDKCPLLPSDPYERSQARFWADYIDKKIYSTGRRVWSGKGEDQEEAKKEFIEILKTLEGELGNKTYFGGDN-LGFVDVALVPFTSWFYSYETCAN--FSIEAECPKLVVWAKTCMESESVSKSLPHPHKIYGFVLE-LKHK 216          
BLAST of CX301094 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.532e-16
Identity = 48/129 (37.21%), Postives = 71/129 (55.04%), Query Frame = 2
Query:   23 LLPQDPYERAMARFWAKFADEKLMQTAWKSTWTKGEEKEDALKATMEALEKIEGELKGKSYFGGENKYAYLEIAIGWINYLIPIWEEIASIQFLDPKRFPAITAWKSKFLDNPLIKETLPPREKLLIYL 409
            LLP DPY+RA ARFWA + D+KL     K   TKGEE+E A K  +E L+ +EG L  K YFGGE+ + +++IA+  I Y    +       F      P   AW  + +    + ++LP + K+L ++
Sbjct:   86 LLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKGEEQEAAKKDFIECLKVLEGALGDKPYFGGES-FGFVDIAL--IGYYSWFYAYETFGNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFV 211          
BLAST of CX301094 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.745e-15
Identity = 48/130 (36.92%), Postives = 75/130 (57.69%), Query Frame = 2
Query:   23 LLPQDPYERAMARFWAKFADEKLMQTAWKSTWTKGEEKEDALKATMEALEKIEGELKGKSYFGGENKYAYLEIA-IGWINYLIPIWEEIASIQFLDPKRFPAITAWKSKFLDNPLIKETLPPREKLLIYL 409
            LLP DPY+RA ARFWA + D+KL     K   TKGEE+E A K  +E L+ +EG L  + YFGGE+ + +++IA IG+ ++    +E   +  F      P   AW  + +    + ++LP + K+L ++
Sbjct:   86 LLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKGEEQEAAKKDFIECLKVLEGALGDRPYFGGES-FGFVDIALIGFYSWFY-AYETFGN--FSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFV 211          
BLAST of CX301094 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.779e-14
Identity = 46/144 (31.94%), Postives = 81/144 (56.25%), Query Frame = 2
Query:    2 ETWPQD-PLLPQDPYERAMARFWAKFADEKLMQTAWKSTWTKGEEKEDALKATMEALEKIEGELKGKSYFGGENKYAYLEIAIGWINYLIPIWEEIASIQFLDPKRFPAITAWKSKFLDNPLIKETLPPREKLLIYLHQRVKHR 430
            E W +  PLLP DPY+R+ ARFWA + D K+  T  +    KGE++E+A K  +E  + +EGEL  K+YFGG+N   ++++A+         +E  A+       R   +  W++  ++N  + ++LP   K+  ++ + +KH+
Sbjct:   77 EVWHEKCPLLPSDPYQRSQARFWANYIDNKIYSTGRRVWSGKGEDQEEAKKEFIEIFKTLEGELGNKTYFGGDN-LGFVDVALVPFTSWFYSYETCANFSIEAECR--KLVVWQN-CMENERVSKSLPHPHKIYDFVLE-LKHK 215          
The following BLAST results are available for this feature:
BLAST of CX301094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
GSTX6_SOYBN2.313e-3044.29Probable glutathione S-transferase OS=Glycine max ... [more]
GSTX1_TOBAC5.165e-2235.97Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX2_TOBAC7.459e-2133.81Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_TOBAC1.077e-1932.37Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXA_ARATH1.317e-1736.00Glutathione S-transferase 103-1A OS=Arabidopsis th... [more]
GSTX1_SOLTU3.831e-1735.07Probable glutathione S-transferase OS=Solanum tube... [more]
GSTXA_TOBAC3.243e-1633.33Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX4_TOBAC5.532e-1637.21Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXC_TOBAC2.745e-1536.92Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX1_NICPL1.779e-1431.94Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]

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Properties
Property NameValue
Genbank descriptionC08005F10SK PhyRootSw1 Citrus sinensis cDNA clone C08005F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301094 ID=CX301094; Name=CX301094; organism=Citrus sinensis; type=EST; length=634bp
TGAGACATGGCCACAAGATCCGTTGCTGCCTCAAGATCCTTATGAAAGAG
CCATGGCTCGATTTTGGGCTAAATTTGCAGATGAAAAGCTGATGCAAACT
GCATGGAAGTCAACGTGGACCAAAGGAGAGGAAAAAGAGGATGCTCTGAA
AGCAACAATGGAAGCTTTGGAGAAGATAGAGGGAGAACTCAAAGGAAAAA
GCTACTTTGGAGGAGAGAACAAATATGCGTATTTGGAAATTGCAATTGGA
TGGATCAATTACCTTATACCAATTTGGGAAGAAATTGCATCCATTCAATT
TCTTGACCCGAAAAGATTTCCAGCCATTACTGCATGGAAAAGCAAGTTTC
TGGATAACCCTTTGATCAAAGAAACCCTGCCACCGAGGGAGAAATTGCTT
ATCTATTTGCACCAGCGCGTCAAACATCGGGAGATTGACGCTACAATCCG
TGAACTGGCGGAGACCAAACTTGAAAATTAATTAATTAATCGAATTATCA
TCTCTGCACGTGTCTCCTTTTTGTACGCTCTGTATGATTTCTTTGTTTTT
TATTATTGCAAGTACTTTGGGTCAAGTTGAATCTGTATTGAGAAAATAAA
GAAGAGTTATGACATATGTATTATACTTTGACGG
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