CX301069
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301069 vs. ExPASy Swiss-Prot
Match: TLP10_ARATH (Tubby-like F-box protein 10 OS=Arabidopsis thaliana GN=TULP10 PE=1 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 7.630e-74 Identity = 150/207 (72.46%), Postives = 162/207 (78.26%), Query Frame = 1 Query: 1 VPSGSYNIAQIAYELNVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQPELL---PRSLEDSFRS-ISFSKS-LDH-SVDFSSARFSEIGALRED-DEDGKVRPLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXX-----EHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 585 VPSGSYNIAQI YELNVLGTRGPRRMHCIM+SIP SS++ GGSVP QPE L P SL+DSFRS ISFSKS DH S+DFSS+RFSE+G +D +E+ RPLILKNK PRWHEQLQCWCLNFRGRVTVASVKNFQL+ E DK+ILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE Sbjct: 239 VPSGSYNIAQITYELNVLGTRGPRRMHCIMNSIPISSLEPGGSVPNQPEKLVPAPYSLDDSFRSNISFSKSSFDHRSLDFSSSRFSEMGISCDDNEEEASFRPLILKNKQPRWHEQLQCWCLNFRGRVTVASVKNFQLVAARQPQPQGTGAAAAPTSAPAHPEQDKVILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445
BLAST of CX301069 vs. ExPASy Swiss-Prot
Match: TLP8_ORYSJ (Tubby-like F-box protein 8 OS=Oryza sativa subsp. japonica GN=TULP8 PE=2 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 4.187e-72 Identity = 146/209 (69.86%), Postives = 162/209 (77.51%), Query Frame = 1 Query: 1 VPSGSYNIAQIAYELNVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQPE-LLPRSLEDSFRS-ISFSKS--LDHSV------DFSSARFSEI-GALREDDEDG--KVRPLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLI-XXXXXXXXXXXXXXXXXXEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 585 +PSGSYNIAQ+ YELNVLGTRGPRRMHC+MHSIPASS++ GG VPGQPE ++PR+ E+SFRS SFSKS +D S+ DFSSARFS+I G DE+G K RPL+L+NK PRWHEQLQCWCLNFRGRVT+ASVKNFQLI E DKIILQFGKV KDMFTMDYRYPLSAFQAFAICLSSFDTKLACE Sbjct: 237 MPSGSYNIAQVTYELNVLGTRGPRRMHCVMHSIPASSVEPGGIVPGQPEQIVPRAFEESFRSTTSFSKSSIMDRSMDFSSSRDFSSARFSDIAGGTINGDEEGQNKERPLVLRNKAPRWHEQLQCWCLNFRGRVTIASVKNFQLIAAPAQPPAGAPTPSQPAPPEQDKIILQFGKVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445
BLAST of CX301069 vs. ExPASy Swiss-Prot
Match: TLP3_ORYSJ (Tubby-like F-box protein 3 OS=Oryza sativa subsp. japonica GN=TULP3 PE=2 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 4.629e-71 Identity = 140/212 (66.04%), Postives = 166/212 (78.30%), Query Frame = 1 Query: 1 VPSGSYNIAQIAYELNVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQPE-LLPRSLEDSFRSI-----------SFSKSL-DHSVDFSSARFSEI-GALREDDEDGKV--RPLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLI-XXXXXXXXXXXXXXXXXXEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 585 VPS +YNIAQ++YELNVLGTRGPRRM C+MHSIPASS++ GG VPGQPE ++PR+LEDSFRS SFSKS+ D S+DFSSARFS+I G++ D++G++ RPL+L+NKPPRWHEQLQCWCLNFRGRVT+ASVKNFQL+ + +K+ILQFGKV +DMFTMDYRYPLSAFQAFAICLSSFDTKLACE Sbjct: 237 VPSVTYNIAQVSYELNVLGTRGPRRMRCMMHSIPASSVEPGGIVPGQPEQIVPRALEDSFRSTTSFSQSFRSTTSFSKSIMDPSMDFSSARFSDISGSIMGGDDNGEIKERPLVLRNKPPRWHEQLQCWCLNFRGRVTIASVKNFQLVAAPSPPPAGAPTPSQPGPADPEKVILQFGKVARDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 448
BLAST of CX301069 vs. ExPASy Swiss-Prot
Match: TLP1_ARATH (Tubby-like F-box protein 1 OS=Arabidopsis thaliana GN=TULP1 PE=2 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 6.684e-70 Identity = 147/219 (67.12%), Postives = 163/219 (74.43%), Query Frame = 1 Query: 1 VPSGSYNIAQIAYELNVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQPELL-PRS-LEDSFRSISFSKS----LDHSVDFSSARFSEI-GALREDD----EDGKVR---PLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXEH----------DKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 585 VPSGSY IAQ++YELNVLGTRGPRRMHC M+SIPASS+ GG+VPGQP+++ PRS L++SFRSI+ S S D+S DFSSARFS+I G L ED E+GK R PL+LKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLI DKIILQFGKVGKDMFTMD+RYPLSAFQAFAICLSSFDTKLACE Sbjct: 237 VPSGSYKIAQVSYELNVLGTRGPRRMHCAMNSIPASSLAEGGTVPGQPDIIVPRSILDESFRSITSSSSRKITYDYSNDFSSARFSDILGPLSEDQEVVLEEGKERNSPPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIAANQPQPQPQPQPQPQPLTQPQPSGQTDGPDKIILQFGKVGKDMFTMDFRYPLSAFQAFAICLSSFDTKLACE 455
BLAST of CX301069 vs. ExPASy Swiss-Prot
Match: TLP14_ORYSJ (Tubby-like F-box protein 14 OS=Oryza sativa subsp. japonica GN=TULP14 PE=2 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 8.730e-70 Identity = 135/208 (64.90%), Postives = 160/208 (76.92%), Query Frame = 1 Query: 4 PSGSYNIAQIAYELNVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQPE-LLPRSLEDSFRSISFSKS--LDHSVDFSSARFSEI--------GALREDDEDGKVRPLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXX---EHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 585 PS +Y+IAQ++YELNVLGTRGPRRM+C+MHSIPASS++ GG+VP QP+ +L RSL++SF SISFSKS +D S+ FSS+R+S+I G D ++ K RPLIL+NK PRWHEQLQCWCLNF+GRVTVASVKNFQL+ +HDK+ILQFGKV KDMFTMDYRYPLSAFQAFAICLSSFDTKLACE Sbjct: 238 PSSTYSIAQVSYELNVLGTRGPRRMNCVMHSIPASSLEAGGTVPCQPDSVLARSLDESFGSISFSKSSIMDRSIRFSSSRYSDISVGGPMVGGQALGDSDESKERPLILRNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAATQPAAGAPTPSQPAPPPPPDHDKVILQFGKVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445
BLAST of CX301069 vs. ExPASy Swiss-Prot
Match: TLP13_ORYSJ (Tubby-like F-box protein 13 OS=Oryza sativa subsp. japonica GN=TULP13 PE=2 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 2.377e-67 Identity = 137/210 (65.24%), Postives = 155/210 (73.81%), Query Frame = 1 Query: 4 PSGSYNIAQIAYELNVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQPE-LLPRSL-EDSFRSISFSKS--LDHSVDFSSARFSEI---------GALREDDEDGKVRPLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLI---XXXXXXXXXXXXXXXXXXEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 585 P +Y+IA I+YELNV GTRGPRRM C+MHSIPASS++ GG+VP QP+ +L SL E SFRS+SFSKS +DHS+ FSSA+FS+I G + DDE+ K PLIL+NK PRWHEQLQCWCLNFRGRVTVASVKNFQLI EHDK+ILQFGKV KDMFTMDY YPLSAFQAFAI LSSFDTKLACE Sbjct: 231 PCSTYSIANISYELNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAHSLNESSFRSVSFSKSSVMDHSMHFSSAQFSDISIGDGPRIGGRVLSDDEECKETPLILQNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIAATQPAAGAPTPSQPVPPPPPEHDKVILQFGKVAKDMFTMDYHYPLSAFQAFAISLSSFDTKLACE 440
BLAST of CX301069 vs. ExPASy Swiss-Prot
Match: TLP7_ORYSJ (Tubby-like F-box protein 7 OS=Oryza sativa subsp. japonica GN=TULP7 PE=2 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 5.296e-67 Identity = 142/229 (62.01%), Postives = 158/229 (69.00%), Query Frame = 1 Query: 1 VPSGSYNIAQIAYELNVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQP-ELLPRSLEDSFRSI--SFSKS--LDHSVDFSSARFSEIG--ALR--EDDEDG----KVRPLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXE---------------------HDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 585 VP+G Y I Q+ YELNVLGTRGPRRM C MHSIPAS+++ GG VPGQP ELLPR E+SFRS+ SFSK DHS DFSS+RFSE G AL+ E ++DG K RPL+L+NK PRWHEQLQCWCLNFRGRVTVASVKNFQLI + HD +ILQFGKV KDMFTMDYRYPLSAFQAFAICL+SFDTKLACE Sbjct: 234 VPTGCYPIVQVNYELNVLGTRGPRRMQCAMHSIPASAVEPGGIVPGQPKELLPRLFEESFRSMATSFSKYSITDHSTDFSSSRFSEFGGGALQGQEQEQDGDDVNKERPLVLRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIAAAPQPSSGAASEPSQAGQAAQQQTQPSQPSSSSSSSSSNHDTVILQFGKVAKDMFTMDYRYPLSAFQAFAICLTSFDTKLACE 462
BLAST of CX301069 vs. ExPASy Swiss-Prot
Match: TLP12_ORYSJ (Tubby-like F-box protein 12 OS=Oryza sativa subsp. japonica GN=TULP12 PE=2 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 1.180e-66 Identity = 136/215 (63.26%), Postives = 153/215 (71.16%), Query Frame = 1 Query: 1 VPSGSYNIAQIAYELNVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQPE-LLPRSLEDSFRSISFSKS---LDHSVDFSSARFSEI-GALREDDED----GKVRPLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXE-----------HDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 585 +P+GSY IA + YELNVLGTRGPRRM C MHSIPAS++D G VPGQPE LLP E+SFRS + S +D S+DFSS+RFSEI G+ + ED K RPL+L+NK PRWHEQLQCWCLNFRGRVTVASVKNFQLI + H K+ILQFGKVGKDMFTMDYRYPLSAFQAFAICL+SFDTKLACE Sbjct: 237 LPTGSYPIAHVKYELNVLGTRGPRRMQCTMHSIPASAVDPEGVVPGQPEQLLPGPFEESFRSTNTSSRFSFMDRSLDFSSSRFSEISGSANQQGEDDIPEAKERPLVLRNKVPRWHEQLQCWCLNFRGRVTVASVKNFQLIAAASSESSQLEQQQQQQQQNHASSSSSASDHGKVILQFGKVGKDMFTMDYRYPLSAFQAFAICLTSFDTKLACE 451
BLAST of CX301069 vs. ExPASy Swiss-Prot
Match: TLP5_ARATH (Tubby-like F-box protein 5 OS=Arabidopsis thaliana GN=TULP5 PE=2 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 7.648e-66 Identity = 128/207 (61.84%), Postives = 149/207 (71.98%), Query Frame = 1 Query: 1 VPSGSYNIAQIAYELNVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQPELLPRSLEDSFRSISFSKSLDHSVDFSSARFSEIGALREDDEDGKVRPLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLI------------XXXXXXXXXXXXXXXXXXEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 585 VPSGSYNIAQ+ YELN+LGTRGPRRM+CIMHSIP+ +++ GG+VP QPE L RSL++SFRSI SK ++HS DF+ R +E+GKVRPL+LK KPPRW + L+CWCLNF+GRVTVASVKNFQL+ HDKIIL FGKVGKDMFTMDYRYPLSAFQAFAI LS+FDTKLACE Sbjct: 233 VPSGSYNIAQVTYELNLLGTRGPRRMNCIMHSIPSLALEPGGTVPSQPEFLQRSLDESFRSIGSSKIVNHSGDFT----------RPKEEEGKVRPLVLKTKPPRWLQPLRCWCLNFKGRVTVASVKNFQLMSAATVQPGSGSDGGALATRPSLSPQQPEQSNHDKIILHFGKVGKDMFTMDYRYPLSAFQAFAISLSTFDTKLACE 429
BLAST of CX301069 vs. ExPASy Swiss-Prot
Match: TLP6_ORYSJ (Tubby-like F-box protein 6 OS=Oryza sativa subsp. japonica GN=TULP6 PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 6.489e-57 Identity = 114/195 (58.46%), Postives = 136/195 (69.74%), Query Frame = 1 Query: 1 VPSGSYNIAQIAYELNVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQPELLPRSLEDSFRSISFSKSLDHSVDFSSARFSEIGALREDDEDGKVRPLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 585 VP+G+Y ++ I+YELNVLG RGPRRM+CIM SIP S++ GG P Q E P S DSF SISF +S +D ++++ S K L+LKNK PRWHEQLQCWCLNFRGRVTVASVKNFQL+ E DK+ILQFGK+GKD+FTMDYRYP+SAFQ+FAICLSSFDTK+ACE Sbjct: 228 VPAGNYPVSHISYELNVLGARGPRRMNCIMDSIPTSAVQEGGKAPTQTEF-PLSGLDSFPSISFFRSKSARIDSATSQLST----------QKEEKLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQLVASDENGPTNQ--------EQDKVILQFGKIGKDLFTMDYRYPISAFQSFAICLSSFDTKIACE 403 The following BLAST results are available for this feature:
BLAST of CX301069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301069 ID=CX301069; Name=CX301069; organism=Citrus sinensis; type=EST; length=736bpback to top |