EY702468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY702468 vs. ExPASy Swiss-Prot
Match: PAB2_SCHPO (Polyadenylate-binding protein 2 OS=Schizosaccharomyces pombe GN=pab2 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.293e-28 Identity = 71/119 (59.66%), Postives = 80/119 (67.23%), Query Frame = 1 Query: 274 NKEEADSRSVFVGNVDYACTPEEVQRDFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMKQYRPR-----RFNPYMGYRGRRPYVPPY 612 +KE D++SV+VGNVDY+ TPEE+Q F SCG+VNRVTIL DKF G PKGFAY+EF E V AL LN S LH R LKV PKRTNVPGM + R R R GYRGR PY Sbjct: 48 DKESIDAQSVYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNALLLNGSMLHERPLKVTPKRTNVPGMSRGRGRGRGRGRGRGRGGYRGRARGFAPY 166
BLAST of EY702468 vs. ExPASy Swiss-Prot
Match: PABP2_MOUSE (Polyadenylate-binding protein 2 OS=Mus musculus GN=Pabpn1 PE=2 SV=3) HSP 1 Score: 124.405 bits (311), Expect = 8.384e-28 Identity = 76/162 (46.91%), Postives = 98/162 (60.49%), Query Frame = 1 Query: 208 QAKVEKEMGAAQDPAN---VAANQANKEEADSRSVFVGNVDYACTPEEVQRDFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGM---------KQYRPRRFNPYMGYRGRRPYVPPYFYSPYGYGKVPRFR 654 Q +VEK+M + P N V + K EAD+RS++VGNVDY T EE++ F CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+ES GRQ+KV+PKRTN PG+ +YR R N Y R R FYS G+ PR R Sbjct: 136 QNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRSRYRARTTN-YNSSRSR-------FYS--GFNSRPRGR 287
BLAST of EY702468 vs. ExPASy Swiss-Prot
Match: PABP2_HUMAN (Polyadenylate-binding protein 2 OS=Homo sapiens GN=PABPN1 PE=1 SV=3) HSP 1 Score: 124.02 bits (310), Expect = 1.095e-27 Identity = 76/162 (46.91%), Postives = 98/162 (60.49%), Query Frame = 1 Query: 208 QAKVEKEMGAAQDPAN---VAANQANKEEADSRSVFVGNVDYACTPEEVQRDFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMK---------QYRPRRFNPYMGYRGRRPYVPPYFYSPYGYGKVPRFR 654 Q +VEK+M + P N V + K EAD+RS++VGNVDY T EE++ F CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+ES GRQ+KV+PKRTN PG+ +YR R N Y R R FYS G+ PR R Sbjct: 140 QNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN-YNSSRSR-------FYS--GFNSRPRGR 291
BLAST of EY702468 vs. ExPASy Swiss-Prot
Match: PABP2_BOVIN (Polyadenylate-binding protein 2 OS=Bos taurus GN=PABPN1 PE=1 SV=3) HSP 1 Score: 124.02 bits (310), Expect = 1.095e-27 Identity = 76/162 (46.91%), Postives = 98/162 (60.49%), Query Frame = 1 Query: 208 QAKVEKEMGAAQDPAN---VAANQANKEEADSRSVFVGNVDYACTPEEVQRDFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMK---------QYRPRRFNPYMGYRGRRPYVPPYFYSPYGYGKVPRFR 654 Q +VEK+M + P N V + K EAD+RS++VGNVDY T EE++ F CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+ES GRQ+KV+PKRTN PG+ +YR R N Y R R FYS G+ PR R Sbjct: 140 QNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN-YNSSRSR-------FYS--GFNSRPRGR 291
BLAST of EY702468 vs. ExPASy Swiss-Prot
Match: PAB2A_XENLA (Polyadenylate-binding protein 2-A OS=Xenopus laevis GN=pabpn1-A PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.868e-27 Identity = 75/155 (48.39%), Postives = 95/155 (61.29%), Query Frame = 1 Query: 208 QAKVEKEMGAAQDPAN---VAANQANKEEADSRSVFVGNVDYACTPEEVQRDFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMGYRGRRPYVP--PYFYSPYGYGKVPRFR 654 Q +VEK+M + P N V + K EAD+RS++VGNVDY T EE++ F CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+ES GRQ+KV+PKRTN PG+ R P YR R FYS GY PR R Sbjct: 131 QNEVEKQMNMSPPPGNAGPVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFCDKESVRTSLALDESLFRGRQIKVVPKRTNRPGIS--TTDRGFPRARYRARASSYSSRSRFYS--GYTPRPRGR 281
BLAST of EY702468 vs. ExPASy Swiss-Prot
Match: PAB2B_XENLA (Polyadenylate-binding protein 2-B OS=Xenopus laevis GN=pabpn1-B PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.439e-27 Identity = 75/155 (48.39%), Postives = 95/155 (61.29%), Query Frame = 1 Query: 208 QAKVEKEMGAAQDPAN---VAANQANKEEADSRSVFVGNVDYACTPEEVQRDFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMGYRGRRPYVP--PYFYSPYGYGKVPRFR 654 Q +VEK+M + P N V + K EAD+RS++VGNVDY T EE++ F CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+ES GRQ+KV+PKRTN PG+ R P YR R FYS GY PR R Sbjct: 130 QNEVEKQMNMSPPPGNAGPVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVVPKRTNRPGIS--TTDRGFPRARYRARASSYSSRSRFYS--GYTPRPRGR 280
BLAST of EY702468 vs. ExPASy Swiss-Prot
Match: PABP2_XENTR (Polyadenylate-binding protein 2 OS=Xenopus tropicalis GN=pabpn1 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.098e-27 Identity = 74/155 (47.74%), Postives = 95/155 (61.29%), Query Frame = 1 Query: 208 QAKVEKEMGAAQDPAN---VAANQANKEEADSRSVFVGNVDYACTPEEVQRDFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMGYRGRRPYVP--PYFYSPYGYGKVPRFR 654 Q +VEK+M + P N V + K EAD+RS++VGNVDY T EE++ F CG+VNRVTIL DK+ G PKGFAY+EF + ++V+ +L L+ES GRQ+KV+PKRTN PG+ R P YR R FYS GY PR R Sbjct: 131 QNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVVPKRTNRPGIS--TTDRGFPRARYRARASSYSSRSRFYS--GYTPRPRGR 281
BLAST of EY702468 vs. ExPASy Swiss-Prot
Match: PABP2_DROME (Polyadenylate-binding protein 2 OS=Drosophila melanogaster GN=Pabp2 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.676e-25 Identity = 67/160 (41.88%), Postives = 89/160 (55.62%), Query Frame = 1 Query: 208 QAKVEKEM--GAAQDPANVAANQANKEEADSRSVFVGNVDYACTPEEVQRDFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMKQYRP----------------------RRFNPYMGYRGRRPYVPPY 612 Q++V+K+M G+ A V + K+E D+RSV+VGNVDY + EE++ F CGT+NRVTIL +K G PKGFAY+EF + V+ AL +NE+ GRQ+KV+ KRTN PG+ R MGYRGR Y PY Sbjct: 65 QSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARGSFRGRGARVSRACCHSTFRGARRAMGYRGRANYYAPY 224
BLAST of EY702468 vs. ExPASy Swiss-Prot
Match: PABP2_DROPS (Polyadenylate-binding protein 2 OS=Drosophila pseudoobscura pseudoobscura GN=Pabp2 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.624e-24 Identity = 67/161 (41.61%), Postives = 90/161 (55.90%), Query Frame = 1 Query: 208 QAKVEKEM--GAAQDPANVAANQANKEEADSRSVFVGNVDYACTPEEVQRDFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMK--------QYRPR---------------RFNPYMGYRGRRPYVPPY 612 Q++V+K+M G+ A V + K+E D+RSV+VGNVDY + EE++ F CGT+NRVTIL +K G PKGFAY+EF + V+ AL +NE+ GRQ+KV+ KRTN PG+ +R R GYRGR Y PY Sbjct: 65 QSEVDKQMAGGSTTGLAAVPLSLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARGSFRGRGARASRACCHSTFRGARRAIRGYRGRANYYAPY 225
BLAST of EY702468 vs. ExPASy Swiss-Prot
Match: EPA2B_XENLA (Embryonic polyadenylate-binding protein 2-B OS=Xenopus laevis GN=epabp2-B PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.345e-24 Identity = 58/119 (48.74%), Postives = 81/119 (68.07%), Query Frame = 1 Query: 277 KEEADSRSVFVGNVDYACTPEEVQRDFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMKQ-----YRPR-RFNPYMGYRGRRPYVPPY 612 K+E D RSV+VGNVDY T ++++ F SCG++NR+TIL DKF G PKG+AY+EF E ++V A+ ++E+ GR +KVLPKRTN+PG+ +R R R N RG+RP P+ Sbjct: 87 KKEIDKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVAMDETVFRGRTIKVLPKRTNMPGISSTDRGGFRGRPRGNRGNYQRGQRPRGRPF 205 The following BLAST results are available for this feature:
BLAST of EY702468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702468 ID=EY702468; Name=EY702468; organism=Citrus sinensis; type=EST; length=874bpback to top |