CX078572
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH2_HUMAN (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Homo sapiens GN=PTRH2 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.464e-28 Identity = 68/175 (38.86%), Postives = 101/175 (57.71%), Query Frame = 3 Query: 96 SLAVSFRPENFIPGLVIGFIFGMLLDLSKP---GKNYVKKKNFLPRKPQEQVSVSSDGDQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 611 SL + + GL +G GM L S G K + + + S+ D + K++LVVR DLKMG GK+A+QC+HAA Y ++ + + +L++WE CGQPK+VV +++ + L A+ GL ++ DAGRTQ++ GS+TVL IGPGP L+D VTG +L Sbjct: 5 SLVMEYLAHPSTLGLAVGVACGMCLGWSLRVCFGMLPKSKTSKTHTDTESEASILGDSGE-YKMILVVRNDLKMGKGKVAAQCSHAAVSAYKQIQRRNPEMLKQWEYCGQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGRTQIAPGSQTVLGIGPGPADLIDKVTGHLKL 178
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH2_BOVIN (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Bos taurus GN=PTRH2 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.464e-28 Identity = 66/153 (43.14%), Postives = 97/153 (63.40%), Query Frame = 3 Query: 156 FGMLLDLSKPGKNYVKKKNFLPRKPQEQVSVSSDGDQ-DLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 611 FGML K+ V++ N P + S G+ + K++LVVR DLKMG GK+A+QC+HAA Y ++ + + LL++WE CGQPK+VV +++ + +L A+ GL ++ DAGRTQ++ GS+TVL IGPGP L+D VTG +L Sbjct: 37 FGML------PKSSVRETN-----PDTETEASILGESGEYKMILVVRNDLKMGKGKVAAQCSHAAVSAYKQIQRRNPELLKEWEYCGQPKVVVKAPDEETLVELLTHAKVLGLTVSLIQDAGRTQIAPGSRTVLGIGPGPADLIDKVTGHLKL 178
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH2_MOUSE (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Mus musculus GN=Ptrh2 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.926e-27 Identity = 55/115 (47.83%), Postives = 78/115 (67.83%), Query Frame = 3 Query: 267 DLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 611 + K++LVVR DLKMG GK+A+QC+HAA Y + + +L++WE CGQPK+VV ++ + +L A+ GL ++ DAGRTQ+ GS+TVL IGPGP L+D VTG +L Sbjct: 66 EYKMILVVRTDLKMGKGKVAAQCSHAAVSAYKQTQRRSPQVLKEWEYCGQPKVVVKAPDEDTLIQLLTHAKTLGLTVSLIQDAGRTQIEPGSRTVLGIGPGPVELIDEVTGHLKL 180
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH2_SCHPO (Probable peptidyl-tRNA hydrolase 2 OS=Schizosaccharomyces pombe GN=SPAC19A8.14 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.145e-25 Identity = 72/199 (36.18%), Postives = 102/199 (51.26%), Query Frame = 3 Query: 93 VSLAVSFRPENFIPGLVIGFIFGMLLDLSKPGKNYVKKKNFLPRKPQEQ--VSVSSDGDQD------------------------LKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 611 V+ +S P + G V+GF+ G ++ + Y K P+++ VSVS+D D + K+VLVVR DL M GKIA+QCAHAA Y D L+R WE GQ KI + + ++ + L A + GL V+ DAGRTQ+++GS TVL IGPGP S+++ VTG +L Sbjct: 6 VNFMISSFPAAVLVGAVVGFMIGRKYSVADASRGYSSKNANKASNPEKESPVSVSNDEDSESETELLDMLKGNSSLAALALAEGQTKMVLVVRTDLGMTKGKIAAQCAHAALACYKIASAVDPDLVRIWENAGQAKITLQAQTEETLELLQAQAMSLGLCARVIHDAGRTQIASGSATVLGIGPGPVSVINEVTGSLKL 204
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH2_DROME (Probable peptidyl-tRNA hydrolase 2 OS=Drosophila melanogaster GN=CG1307 PE=1 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 5.680e-25 Identity = 61/130 (46.92%), Postives = 80/130 (61.54%), Query Frame = 3 Query: 237 QVSVSSDG----DQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 614 + SVS G + + K+VLVVR DLKMG GKIA+QC H A G Y + LLR WE CG KI V +++ E+ + + AE L T ++ DAGRTQ+ A SKTVLA+GP + +D VTG +LL Sbjct: 57 EASVSDKGYGGLNDNFKMVLVVRNDLKMGKGKIAAQCGHGAVGAYQRAVVRTPRLLRSWENCGCAKIAVRVESEAELMAIKKEAERQQLNTCLIRDAGRTQIEANSKTVLAVGPAAAADIDRVTGHLKLL 186
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH_SULTO (Peptidyl-tRNA hydrolase OS=Sulfolobus tokodaii GN=pth PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.944e-23 Identity = 56/118 (47.46%), Postives = 75/118 (63.56%), Query Frame = 3 Query: 273 KLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHL----LRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 614 K+V+VVR DL MG GKIA+Q AHAA + +++ S L L KW + GQPKIVV + E+NK +E A LPT ++ DAG+TQ+ G+ T + IGP P LVD +TG +LL Sbjct: 4 KMVIVVRTDLDMGKGKIAAQVAHAAVSLVLDILNSSNSLWKEWLYKWLEEGQPKIVVKVPSLDELNKRYEKAIELNLPTTIIQDAGKTQIEPGTITCIGIGPAPVELVDKITGDLKLL 121
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH_PYRFU (Peptidyl-tRNA hydrolase OS=Pyrococcus furiosus GN=pth PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.234e-21 Identity = 53/114 (46.49%), Postives = 71/114 (62.28%), Query Frame = 3 Query: 273 KLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 614 K V+V R DLK+ GK+A Q AH A E + R W + GQ K+VV +N++E+ KL AE GLPT ++ DAG T++ G+ TVLAIGPGP+ +VD VTG +LL Sbjct: 6 KQVIVARSDLKLSKGKLAVQVAHGAVTAAFEAYKKKREWFEAWFREGQKKVVVKAQNEEELFKLKSEAEKLGLPTALIRDAGLTEIPPGTITVLAIGPGPEEVVDKVTGHLKLL 119
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH_METS5 (Peptidyl-tRNA hydrolase OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=pth PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.810e-21 Identity = 53/117 (45.30%), Postives = 74/117 (63.25%), Query Frame = 3 Query: 270 LKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQ--SDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 614 +K+V++VR D+ MG GKIA+Q AHAA + + M S R L W GQPK+VV + +++ + A + GLPT V++DAGRTQV G+ T IGPGP L+D +TG +LL Sbjct: 1 MKMVVMVRTDINMGKGKIAAQVAHAAVSLVLDCMSRSSWRDWLDSWLHEGQPKVVVKVSSLEDLLSRVDKARSQGLPTTVISDAGRTQVEPGTVTCAGIGPGPDDLIDKITGDLKLL 117
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH_SULSO (Peptidyl-tRNA hydrolase OS=Sulfolobus solfataricus GN=pth PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.499e-21 Identity = 52/119 (43.70%), Postives = 76/119 (63.87%), Query Frame = 3 Query: 270 LKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSD----RHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 614 +K+V+VVR D+KMG GKIA+Q AHAA + ++ S+ + L +W GQPKI+V + E+ + AE LP ++ DAG+TQ+ G+ T L IGP P++LVDS+TG +LL Sbjct: 2 IKMVIVVRSDIKMGKGKIAAQVAHAAVTLVVSIINSNNLRWKEWLNEWLHQGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGKTQLEPGTITCLGIGPAPENLVDSITGDLKLL 120
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH_SULAC (Peptidyl-tRNA hydrolase OS=Sulfolobus acidocaldarius GN=pth PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.499e-21 Identity = 50/120 (41.67%), Postives = 75/120 (62.50%), Query Frame = 3 Query: 270 LKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSD-----RHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 614 +K+ ++VR DL MG GKIA+Q AHAA + E++Q + L W GQPKIV+ KN E+ + + A +GLP ++ DAG+TQ+ G+ T IGPGP+ ++D++TG +LL Sbjct: 1 MKMAVLVRTDLDMGKGKIAAQVAHAAVSLVLEIVQKRSKAEWKEWLEMWINQGQPKIVLKVKNLDELLEKYNKALQSGLPATIIQDAGKTQIEPGTITCAGIGPGPEEMIDNITGDLKLL 120 The following BLAST results are available for this feature:
BLAST of CX078572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CX078572 ID=CX078572; Name=CX078572; organism=Citrus sinensis; type=EST; length=796bpback to top |