CX078552

Overview
NameCX078552
Unique NameCX078552
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9004 contig Csv1_Contig9004:58..808. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 7.165e-75
Identity = 138/224 (61.61%), Postives = 169/224 (75.45%), Query Frame = 2
Query:   92 VTLILSIISLLACTSN-----AQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNIDPAFATTRRTTCP 748
            +++++ +++LL    N     AQL+  FY+TSCPN     +  +  AVN + R  ASILRLFFHDCFVNGCDGS+LLDDT++FTGE+NA PNRNSARGF VID IK+ +E AC   VSCADILA+AARD V  LGGP W V +GRRDARTASQ+AANS IP P+SSL+ LIS F+A GL+ +DM  LSG H IG +RC  FR RIYN+TNI+ AFATTR+ TCP
Sbjct:    7 ISILVLVVTLLLQGDNNYVVEAQLTTNFYSTSCPNLLSTVQTAVKSAVNSEARMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAAPNRNSARGFNVIDNIKSAVEKACPGVVSCADILAIAARDSVVALGGPNWNVKVGRRDARTASQAAANSNIPAPTSSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCTNFRARIYNETNINAAFATTRQRTCP 230          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 272.707 bits (696), Expect = 1.494e-72
Identity = 131/202 (64.85%), Postives = 157/202 (77.72%), Query Frame = 2
Query:  143 QLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNIDPAFATTRRTTCP 748
            QL+  FY+TSCPN     +  +  AV+ QPR  ASILRLFFHDCFVNGCDGS+LLDDT++FTGE+NAGPNRNSARGF VI+ IK+ +E AC   VSCADILA+AARD V  LGGP W V +GRRDA+TASQ+AANS IP PS SL+ LIS F+A GL+ +DM  LSG H IG +RC  FR R+YN+TNI+ AFAT R+ +CP
Sbjct:    1 QLTTNFYSTSCPNLLSTVKSGVKSAVSSQPRMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAGPNRNSARGFTVINDIKSAVEKACPGVVSCADILAIAARDSVVQLGGPNWNVKVGRRDAKTASQAAANSNIPAPSMSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCVNFRARVYNETNINAAFATLRQRSCP 202          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 4.806e-71
Identity = 131/229 (57.21%), Postives = 171/229 (74.67%), Query Frame = 2
Query:   65 MASSISYLFVTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNIDPAFATTRRTTCPA 751
            MASS S+  V + L +++L A +S+AQLS  FY+ +CP      +  +  AV+++ R  AS+LRLFFHDCFVNGCD SVLLDDT++FTGE+ A PN+NS RG  VID IK+++E+ C   VSCADI+A+AARD V +LGGP W V LGRRD++TAS S AN+ IP P+SSL+ LIS F A+GL+ +DM  LSG H IG ARC +FR RIYN+TNID +FA TR+ +CP+
Sbjct:    1 MASS-SFSIVVVALGVLALFAGSSSAQLSTNFYSKTCPKVFDTVKSGVQSAVSKERRMGASLLRLFFHDCFVNGCDASVLLDDTSSFTGEQTAVPNKNSIRGLNVIDNIKSQVESVCPGVVSCADIIAIAARDSVVILGGPDWDVKLGRRDSKTASLSGANNNIPPPTSSLSNLISKFQAQGLSTRDMVALSGAHTIGQARCTSFRARIYNETNIDSSFAKTRQASCPS 228          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.447e-67
Identity = 127/219 (57.99%), Postives = 161/219 (73.52%), Query Frame = 2
Query:   98 LILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANS-QIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNIDPAFATTRRTTCPA 751
            ++L +I +LA  S AQL+  FY  SCP+   + R  + +AV R+PR  AS+LRLFFHDCFVNGCDGS+LLDDT +F GEK +GP+ NS RGFEVID IK ++E  C   VSCADILA+ ARD V LLGGP W+V LGRRD+ TA+ +AANS  IP P ++L+ LI+ F A+GL+ +DM  LSG H IG A+C  FRNRIYN +NID +FA ++R  CPA
Sbjct:    5 VLLMMIMMLASQSEAQLNRDFYKESCPSLFLVVRRVVKRAVAREPRMGASLLRLFFHDCFVNGCDGSLLLDDTPSFLGEKTSGPSNNSVRGFEVIDKIKFKVEKMCPGIVSCADILAITARDSVLLLGGPGWSVKLGRRDSTTANFAAANSGVIPPPITTLSNLINRFKAQGLSTRDMVALSGAHTIGRAQCVTFRNRIYNASNIDTSFAISKRRNCPA 223          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER2_ORYSJ (Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.225e-66
Identity = 130/228 (57.02%), Postives = 161/228 (70.61%), Query Frame = 2
Query:   65 MASSISYLFVTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNIDPAFATTRRTTCP 748
            MAS+ S   V+L+L + + +A  ++AQLS TFY TSCPN     +  +T AVN +PR  AS++RL FHDCFV GCD SVLL        E+NAGPN  S RGF V+D IKT++EA C+ TVSCADILAVAARD V  LGGP+WTV LGRRD+ TA++S AN+ +P PSSSLA LI  F+ KGL   DM  LSG H IG A+C  FR+R+YN+TNID +FAT  +  CP
Sbjct:    1 MASASS---VSLMLLVAAAMASAASAQLSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSGQ-----EQNAGPNAGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLYNETNIDSSFATALKANCP 220          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER2_ORYSI (Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2)

HSP 1 Score: 253.062 bits (645), Expect = 1.225e-66
Identity = 130/228 (57.02%), Postives = 161/228 (70.61%), Query Frame = 2
Query:   65 MASSISYLFVTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNIDPAFATTRRTTCP 748
            MAS+ S   V+L+L + + +A  ++AQLS TFY TSCPN     +  +T AVN +PR  AS++RL FHDCFV GCD SVLL        E+NAGPN  S RGF V+D IKT++EA C+ TVSCADILAVAARD V  LGGP+WTV LGRRD+ TA++S AN+ +P PSSSLA LI  F+ KGL   DM  LSG H IG A+C  FR+R+YN+TNID +FAT  +  CP
Sbjct:    1 MASASS---VSLMLLVAAAMASAASAQLSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSGQ-----EQNAGPNAGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLYNETNIDSSFATALKANCP 220          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.089e-66
Identity = 129/229 (56.33%), Postives = 159/229 (69.43%), Query Frame = 2
Query:   65 MASSISYLFVTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNIDPAFATTRRTTCPA 751
            MASS S+  +++++ +    A  ++AQLSPTFY+ SCP      +  +T AV ++ R  AS+LRL FHDCFV GCDGSVLL+DTATFTGE+ A PN  S RGF V+D IK ++EA C   VSCADILAVAARD V  LGGP+W V LGRRD+ TAS + ANS +P PS  LA L + FA K L+  D+  LSG H IG A+C  FR  IYNDTN++ AFAT RR  CPA
Sbjct:    1 MASS-SFTSLSVMVLLCLAAAAVASAQLSPTFYSRSCPRALATIKAAVTAAVAQEARMGASLLRLHFHDCFVQGCDGSVLLNDTATFTGEQTANPNVGSIRGFGVVDNIKAQVEAVCPGVVSCADILAVAARDSVVALGGPSWRVLLGRRDSTTASLALANSDLPAPSLDLANLTAAFAKKRLSRTDLVALSGAHTIGLAQCKNFRAHIYNDTNVNAAFATLRRANCPA 228          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 4.655e-66
Identity = 126/219 (57.53%), Postives = 157/219 (71.69%), Query Frame = 2
Query:   98 LILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQI-PGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNIDPAFATTRRTTCPA 751
            ++L  I +L   + AQL   FY+ SCP+     R  + + V ++ R AAS+LRLFFHDCFVNGCD S+LLDDT +F GEK AGPN NS RG+EVIDAIK+R+E  C   VSCADILA+ ARD V L+GG  W+V LGRRD+ TAS S ANS + P P+S+L  LI++F A GL+ +DM  LSG H IG ARC  FR+RIYN TNID +FA +RR +CPA
Sbjct:   14 VVLLFIVMLGSQAQAQLRTDFYSDSCPSLLPTVRRVVQREVAKERRIAASLLRLFFHDCFVNGCDASILLDDTRSFLGEKTAGPNNNSVRGYEVIDAIKSRVERLCPGVVSCADILAITARDSVLLMGGRGWSVKLGRRDSITASFSTANSGVLPPPTSTLDNLINLFRANGLSPRDMVALSGAHTIGQARCVTFRSRIYNSTNIDLSFALSRRRSCPA 232          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 250.751 bits (639), Expect = 6.079e-66
Identity = 126/229 (55.02%), Postives = 158/229 (69.00%), Query Frame = 2
Query:   65 MASSISYLFVTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNIDPAFATTRRTTCPA 751
            MA  IS +   + + +I L     +AQLS  FYAT CPN     +  +  AV ++ R  AS+LRL FHDCFV GCD SVLLDDT+ FTGEK AGPN NS RGFEVID IK+++E+ C   VSCADILAVAARD V  LGG +W V LGRRD+ TAS S+ANS +P P  +L+ LIS F+ KG T +++  LSG H IG A+C AFR RIYN++NIDP +A + +  CP+
Sbjct:    1 MALPISKVDFLIFMCLIGL----GSAQLSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNFTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFRTRIYNESNIDPTYAKSLQANCPS 225          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.643e-61
Identity = 113/210 (53.81%), Postives = 144/210 (68.57%), Query Frame = 2
Query:  140 AQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            + L P FY  SCP    I    + KA+ ++PR AAS+LRL FHDCFV GCD S+LLDD+AT   EKNAGPN+NS RGF+VID IK +LE AC  TVSCADILA+AAR    L GGP+W +PLGRRD+RTAS + AN+ IP P+S++  L++MF  KGL  +D+  LSGGH IG ARC  F+ R+YN       D  ++ ++    R+ CP
Sbjct:   43 SNLYPQFYQFSCPQADEIVMTVLEKAIAKEPRMAASLLRLHFHDCFVQGCDASILLDDSATIRSEKNAGPNKNSVRGFQVIDEIKAKLEQACPQTVSCADILALAARGSTILSGGPSWELPLGRRDSRTASLNGANTNIPAPNSTIQNLLTMFQRKGLNEEDLVSLSGGHTIGVARCTTFKQRLYNQNGNNQPDETLERSYYYGLRSICP 252          
The following BLAST results are available for this feature:
BLAST of CX078552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER52_ARATH7.165e-7561.61Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PERP7_BRARA1.494e-7264.85Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PER4_VITVI4.806e-7157.21Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PER67_ARATH1.447e-6757.99Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PER2_ORYSJ1.225e-6657.02Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER2_ORYSI1.225e-6657.02Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX1... [more]
PER70_MAIZE2.089e-6656.33Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]
PER68_ARATH4.655e-6657.53Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]
PER1_ARAHY6.079e-6655.02Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PER9_ARATH2.643e-6153.81Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_9G02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-9G02-M3-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078552 ID=CX078552; Name=CX078552; organism=Citrus sinensis; type=EST; length=751bp
AATTAAACCGCTTGCCGCTTCTAGCTAGCTCATCTGCTTTAACTTTCCAT
TTTTGGATTGGTTCATGGCATCTTCAATTTCTTATTTGTTTGTTACACTT
ATACTCTCAATTATATCTCTTCTAGCTTGCACCTCCAATGCGCAACTTTC
TCCAACCTTTTATGCAACATCTTGCCCCAATTTTCAAAGAATCGCGAGGG
ATGAAATGACCAAAGCTGTTAATAGACAACCGCGTAATGCTGCCTCTATT
CTTCGCCTCTTCTTCCATGACTGCTTCGTTAATGGCTGCGATGGGTCGGT
ACTACTAGATGACACAGCCACATTCACCGGCGAGAAGAATGCAGGACCAA
ACAGAAACTCTGCTAGGGGTTTTGAAGTGATTGACGCCATTAAAACTCGT
CTGGAAGCAGCTTGCAACGCCACCGTTTCATGTGCCGACATCCTTGCTGT
TGCAGCCCGAGACGGTGTCGCCTTGCTTGGAGGACCGACTTGGACGGTAC
CGCTCGGCCGGCGAGATGCAAGAACGGCCAGTCAGAGTGCAGCCAATAGC
CAAATCCCTGGACCATCCTCCAGCCTGGCAACACTCATATCAATGTTTGC
AGCCAAAGGCCTGACCGCCCAAGACATGACAGTCCTCTCCGGCGGCCACG
CCATCGGATTCGCTCGATGCGCCGCCTTCCGGAACCGCATATACAACGAC
ACCAACATTGACCCAGCTTTTGCAACCACCAGAAGAACAACCTGCCCGGC
T
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