CX078490

Overview
NameCX078490
Unique NameCX078490
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length586
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX078490 vs. ExPASy Swiss-Prot
Match: TOM6_ARATH (Mitochondrial import receptor subunit TOM6 homolog OS=Arabidopsis thaliana GN=TOM6 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.825e-13
Identity = 32/42 (76.19%), Postives = 38/42 (90.48%), Query Frame = -3 
Query:  405 MFPGMFMKKPDKAAALKQLRSHVAMFGTWVVVIRVTPYLLHY 530
            MFPGMFM+KPDKA ALKQLR+HVA+FG+WVV+IR  PY+L Y
Sbjct:    1 MFPGMFMRKPDKAEALKQLRTHVALFGSWVVIIRAAPYVLSY 42
The following BLAST results are available for this feature:
BLAST of CX078490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TOM6_ARATH2.825e-1376.19Mitochondrial import receptor subunit TOM6 homolog... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_9D07_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-9D07-G13-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078490 ID=CX078490; Name=CX078490; organism=Citrus sinensis; type=EST; length=586bp
TTTTTTTTTTTTTTTTTGAAGAAAATGTTAATGGTTTACTTAGGGAAGGT
CTCTAGCATGTGAAAAAACGCGATAGAACAATGTATAACGACAATGGAGA
AATTAATTAGTAGATACTACTACCAAAAGTAAATTCAACAAGAATAATCA
TAGACCAGTTATTGCATTTTACGAAAGTACCCACCCACGCTTCAAACTCA
ATAACAAGTTACAGGTATGTTACCCCTGCCAAATCCAGGGCATACATTAA
AAACAATTATGACACTTCTAAACAGCGCGCCACTTTCTCTTCATCTTCAT
CTTACAGCTGCCGCACCACCAAACACAGAGAAAAAGACGGTTCAGCTAGA
GAGAGAAAGAGAGAGTTAGAATTCGAGCTTGAGCTCTTCTTTTTCTCTGG
AGAAATAGTGAAGAAGGTAGGGGGTGACGCGAATCACAACGACCCAGGTC
CCGAACATGGCCACGTGGCTCCGCAGCTGCTTCAAGGCCGCCGCCTTGTC
TGGCTTCTTCATGAACATTCCCGGAAACATCCTTGCTTCGGCTTAAACCC
TAGCTTTGTGTTACTCTGTTGATCAGACGCTTCCCT
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