EY702430
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702430 vs. ExPASy Swiss-Prot
Match: PSD11_MOUSE (26S proteasome non-ATPase regulatory subunit 11 OS=Mus musculus GN=Psmd11 PE=1 SV=3) HSP 1 Score: 100.908 bits (250), Expect = 2.360e-26 Identity = 53/144 (36.81%), Postives = 91/144 (63.19%), Query Frame = 3 Query: 150 AQAKEASNPSDAISMLYRVL--DDPSSSSEALRVKELAITELSDLLRQENRAQDLCNLLTQLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQIALCKEMVQWTRAEKRTFLRQRVEARLAALLMESREYTEALTLLTSLVK 575 AQ+ +++ +I +L+ ++ D + EA++VKE +I EL LL + +A +L LL +RPF + I KAK A++VR ++D + + ++ LC E ++W ++EKRTFLRQ +EARL +L +++ Y EAL L + L++ Sbjct: 12 AQSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKTGQAAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKSEKRTFLRQALEARLVSLYFDTKRYQEALHLGSQLLR 155 HSP 2 Score: 39.6614 bits (91), Expect = 2.360e-26 Identity = 20/52 (38.46%), Postives = 30/52 (57.69%), Query Frame = 2 Query: 659 PKGKGCPHSSEDSCKCYICATRLTGTIDLQSGNLH-AEEKDYKTAIAISLKA 811 PK + S+ + C +L T+D+QSG +H AEEKD+KTA + +A Sbjct: 184 PKARAALTSARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYEA 235
BLAST of EY702430 vs. ExPASy Swiss-Prot
Match: PSD11_HUMAN (26S proteasome non-ATPase regulatory subunit 11 OS=Homo sapiens GN=PSMD11 PE=1 SV=3) HSP 1 Score: 100.908 bits (250), Expect = 2.360e-26 Identity = 53/144 (36.81%), Postives = 91/144 (63.19%), Query Frame = 3 Query: 150 AQAKEASNPSDAISMLYRVL--DDPSSSSEALRVKELAITELSDLLRQENRAQDLCNLLTQLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQIALCKEMVQWTRAEKRTFLRQRVEARLAALLMESREYTEALTLLTSLVK 575 AQ+ +++ +I +L+ ++ D + EA++VKE +I EL LL + +A +L LL +RPF + I KAK A++VR ++D + + ++ LC E ++W ++EKRTFLRQ +EARL +L +++ Y EAL L + L++ Sbjct: 12 AQSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKTGQAAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKSEKRTFLRQALEARLVSLYFDTKRYQEALHLGSQLLR 155 HSP 2 Score: 39.6614 bits (91), Expect = 2.360e-26 Identity = 20/52 (38.46%), Postives = 30/52 (57.69%), Query Frame = 2 Query: 659 PKGKGCPHSSEDSCKCYICATRLTGTIDLQSGNLH-AEEKDYKTAIAISLKA 811 PK + S+ + C +L T+D+QSG +H AEEKD+KTA + +A Sbjct: 184 PKARAALTSARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYEA 235
BLAST of EY702430 vs. ExPASy Swiss-Prot
Match: PSD11_BOVIN (26S proteasome non-ATPase regulatory subunit 11 OS=Bos taurus GN=PSMD11 PE=2 SV=3) HSP 1 Score: 100.908 bits (250), Expect = 2.360e-26 Identity = 53/144 (36.81%), Postives = 91/144 (63.19%), Query Frame = 3 Query: 150 AQAKEASNPSDAISMLYRVL--DDPSSSSEALRVKELAITELSDLLRQENRAQDLCNLLTQLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQIALCKEMVQWTRAEKRTFLRQRVEARLAALLMESREYTEALTLLTSLVK 575 AQ+ +++ +I +L+ ++ D + EA++VKE +I EL LL + +A +L LL +RPF + I KAK A++VR ++D + + ++ LC E ++W ++EKRTFLRQ +EARL +L +++ Y EAL L + L++ Sbjct: 12 AQSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKTGQAAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKSEKRTFLRQALEARLVSLYFDTKRYQEALHLGSQLLR 155 HSP 2 Score: 39.6614 bits (91), Expect = 2.360e-26 Identity = 20/52 (38.46%), Postives = 30/52 (57.69%), Query Frame = 2 Query: 659 PKGKGCPHSSEDSCKCYICATRLTGTIDLQSGNLH-AEEKDYKTAIAISLKA 811 PK + S+ + C +L T+D+QSG +H AEEKD+KTA + +A Sbjct: 184 PKARAALTSARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYEA 235
BLAST of EY702430 vs. ExPASy Swiss-Prot
Match: RPN6_SCHPO (Probable 26S proteasome regulatory subunit rpn6 OS=Schizosaccharomyces pombe GN=rpn6 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.083e-24 Identity = 53/140 (37.86%), Postives = 83/140 (59.29%), Query Frame = 3 Query: 156 AKEASNPSDAISMLYRVLDDPSSSSEAL-RVKELAITELSDLLRQENRAQDLCNLLTQLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQIALCKEMVQWTRAEKRTFLRQRVEARLAALLMESREYTEALTLLTSLV 572 A ++++ AI + VL+ S E + +E A+T LSDL +ENR DL L+ Q RP + KAK+AKIVR +ID + + LQI + + ++W EKRTFLRQ +E +L +L ++ YT+A+ L+ +L+ Sbjct: 13 AVKSNDIEKAIDLYKEVLNKGVSKDEKVANEQEQALTNLSDLYVRENRHNDLAQLVQQSRPLMANFSKAKSAKIVRTLIDKFSGEKKSLPLQIEVANDCIKWAIKEKRTFLRQALETKLISLYYDNSSYTDAINLINTLL 152 HSP 2 Score: 42.3578 bits (98), Expect = 2.083e-24 Identity = 21/59 (35.59%), Postives = 32/59 (54.24%), Query Frame = 2 Query: 647 IKKPPKGKGCPHSSEDSCKCYICATRLTGTIDLQSGNLHAEEKDYKTAIAISLKALRLF 823 I+ PK + +++ S C L G +DLQSG LHA++ D+KTA + +A F Sbjct: 178 IRNIPKARASLTAAKTSANAVYCPPMLQGNLDLQSGILHADDMDFKTAYSYFYEAYEGF 236
BLAST of EY702430 vs. ExPASy Swiss-Prot
Match: PSD11_DICDI (26S proteasome non-ATPase regulatory subunit 11 OS=Dictyostelium discoideum GN=psmD11 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 9.924e-24 Identity = 52/143 (36.36%), Postives = 75/143 (52.45%), Query Frame = 3 Query: 153 QAKEASNPSD---AISMLYRVLDDPSSSSEALRVKELAITELSDLLRQENRAQDLCNLLTQLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQIALCKEMVQWTRAEKRTFLRQRVEARLAALLMESREYTEALTLLTSLV 572 Q +E N D AI ++L S + +KE AI L+ L + + L LL +RPFF I K KT KIVR ID + +P I KE +QW + R +LRQR+E +L L+ E+++Y AL+ LT+L+ Sbjct: 6 QLEEIGNCQDSNKAIQDYNKILTIQESPDD---IKEEAILRLAKLFVKIGKGDQLPTLLRSVRPFFDKISKPKTDKIVRNFIDIFSTVPDNLTTLIEFVKENIQWCKDTNRIYLRQRLETKLFTLMFEAKDYANALSGLTTLL 145 HSP 2 Score: 45.4394 bits (106), Expect = 9.924e-24 Identity = 21/50 (42.00%), Postives = 29/50 (58.00%), Query Frame = 2 Query: 647 IKKPPKGKGCPHSSEDSCKCYICATRLTGTIDLQSGNLHAEEKDYKTAIA 796 +K PK + S+ + C +L ID+QSG LH+EEKDYKTA + Sbjct: 171 LKNIPKARAALTSARTNANTIYCPPKLQAEIDMQSGILHSEEKDYKTAFS 220 HSP 3 Score: 23.0978 bits (48), Expect = 9.924e-24 Identity = 8/18 (44.44%), Postives = 13/18 (72.22%), Query Frame = 1 Query: 781 QNCYSYFFESIEAFHALK 834 + +SYFFES E + +L+ Sbjct: 216 KTAFSYFFESYETYDSLE 233
BLAST of EY702430 vs. ExPASy Swiss-Prot
Match: RPN6_YEAST (26S proteasome regulatory subunit RPN6 OS=Saccharomyces cerevisiae GN=RPN6 PE=1 SV=3) HSP 1 Score: 59.3066 bits (142), Expect = 1.850e-13 Identity = 34/143 (23.78%), Postives = 70/143 (48.95%), Query Frame = 3 Query: 177 SDAISMLYRVLDDPSSSSEAL----------RVKELAITELSDLLRQENRAQDLCNLLTQLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQIALCKEMVQWTRAEKRTFLRQRVEARLAALLMESREYTEALTLLTSLVK 575 ++A + +LD SS S A +E +I EL L L + + K+KT K+++ +I+ ++P + + QI +C++ +++ + EKR FL+ + +LA L + ++Y ++L L+ L++ Sbjct: 21 NEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLR 163 HSP 2 Score: 37.7354 bits (86), Expect = 1.850e-13 Identity = 17/45 (37.78%), Postives = 24/45 (53.33%), Query Frame = 2 Query: 662 KGKGCPHSSEDSCKCYICATRLTGTIDLQSGNLHAEEKDYKTAIA 796 K K ++ + C T+ +DL SG LH E+KDYKTA + Sbjct: 193 KSKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDKDYKTAFS 237 The following BLAST results are available for this feature:
BLAST of EY702430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY702430 ID=EY702430; Name=EY702430; organism=Citrus sinensis; type=EST; length=898bpback to top |