CX078413

Overview
NameCX078413
Unique NameCX078413
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9967 contig Csv1_Contig9967:378..1243. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: DYRK2_DICDI (Probable serine/threonine-protein kinase dyrk2 OS=Dictyostelium discoideum GN=dyrk2 PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 9.689e-45
Identity = 90/209 (43.06%), Postives = 133/209 (63.64%), Query Frame = 3
Query:  243 GFEED-KNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIW 866
            G++ D   + VV    IA R+ +   LG  +F + ++ +D  TG  V +KI++N K F +Q+L EIK+L+Y+  +DP     ++ L +YFY+R HL++  ELL  NLY+F K N   G    + +  ++    Q L +L+FL    +IH DLKPENIL+KS ++  +K+ID GSSCFE + + +Y+QSR YR+PEVILG  YDK IDIW
Sbjct:  585 GYDNDIGEYKVVERDHIAYRFEIVSILGQGSFCQVVKGYDYKTGEMVALKILRNQKRFHNQALTEIKILEYLKTNDPNSTASIVHLNNYFYFRNHLILTFELLSMNLYDFLKVNHFQG----YNLNLVRRFGAQILTSLRFLSKRNIIHADLKPENILLKSPTKSGIKLIDFGSSCFENEQIFTYIQSRFYRSPEVILGTKYDKSIDIW 789          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: POM1_SCHPO (Dual specificity protein kinase pom1 OS=Schizosaccharomyces pombe GN=pom1 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.117e-43
Identity = 92/209 (44.02%), Postives = 136/209 (65.07%), Query Frame = 3
Query:  243 GFEEDK-NFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIW 866
            GF++++ ++ VVL   IA RY V ++LG  +F + ++  D  TG  V +KII+N K F  Q+L E K+L+ + + DP D+Y +++  D+FY+R+HL +  ELL  NLYE  K N   G  +      ++SIT Q ++ L  L+   +IHCDLKPENIL+    + +VKVID GSSCFE + + +Y+QSR YR+PEVILG+ Y   ID+W
Sbjct:  679 GFDDERGDYKVVLGDHIAYRYEVVDFLGKGSFGQVLRCIDYETGKLVALKIIRNKKRFHMQALVETKILQKIREWDPLDEYCMVQYTDHFYFRDHLCVATELLGKNLYELIKSNGFKGLPIVV----IKSITRQLIQCLTLLNEKHVIHCDLKPENILLCHPFKSQVKVIDFGSSCFEGECVYTYIQSRFYRSPEVILGMGYGTPIDVW 883          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: DYRK4_HUMAN (Dual specificity tyrosine-phosphorylation-regulated kinase 4 OS=Homo sapiens GN=DYRK4 PE=1 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.891e-40
Identity = 88/212 (41.51%), Postives = 130/212 (61.32%), Query Frame = 3
Query:  234 NRTGFEEDKNFHV-VLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIW 866
            ++T F+++  F++ VL+  IA RY V E +G  +F +  +  D      V +KII+N K F  Q+L E+K+L+ + K D  + Y+++ + D+FY+R H  I  ELL  NLYE  K N   G    F++  ++  T+  L+ LQ L    +IHCDLKPENI++    +  VKVID GSSC+E   + +Y+QSR YR+PEVILG  YD  ID+W
Sbjct:   81 SKTSFDDEHGFYLKVLHDHIAYRYEVLETIGKGSFGQVAKCLDHKNNELVALKIIRNKKRFHQQALMELKILEALRKKDKDNTYNVVHMKDFFYFRNHFCITFELLGINLYELMKNNNFQG----FSLSIVRRFTLSVLKCLQMLSVEKIIHCDLKPENIVLYQKGQASVKVIDFGSSCYEHQKVYTYIQSRFYRSPEVILGHPYDVAIDMW 288          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: DYRK2_MOUSE (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Mus musculus GN=Dyrk2 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.225e-40
Identity = 82/212 (38.68%), Postives = 130/212 (61.32%), Query Frame = 3
Query:  234 NRTGFEEDKNFHV-VLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIW 866
            N  G+++D+  +V V +  +A RY V + +G  +F + ++A+D      V +K+++N K F  Q+ +EI++L+++ K D  +  +++ + + F +R H+ +  ELL  NLYE  K N+  G    F++P ++      L+ L  LH   +IHCDLKPENIL+K   R  +KVID GSSC+E   + +Y+QSR YRAPEVILG  Y   ID+W
Sbjct:  197 NNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG----FSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSSIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMW 404          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: DYRK2_CHICK (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Gallus gallus GN=DYRK2 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.225e-40
Identity = 82/217 (37.79%), Postives = 132/217 (60.83%), Query Frame = 3
Query:  219 IVHRKNRTGFEEDKNFHV-VLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIW 866
            ++   N  G+++D+  ++ V +  IA RY V + +G  +F + ++A+D      V +K+++N K F  Q+ +EI++L+++ K D  +  +++ + + F +R H+ +  ELL  NLYE  K N+  G    F++P ++      L+ L  LH   +IHCDLKPENIL+K   R  +KVID GSSC+E   + +Y+QSR YRAPEVILG  Y   ID+W
Sbjct:  119 VIGGPNNCGYDDDQGSYIQVPHDHIAYRYEVLKVIGKGSFGQVVKAYDHKMHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNNMNVIHMLENFTFRSHICMTFELLSMNLYELIKKNKFQG----FSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMW 331          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: DYRK3_DROME (Putative dual specificity tyrosine-phosphorylation-regulated kinase 3 homolog OS=Drosophila melanogaster GN=Dyrk3 PE=1 SV=3)

HSP 1 Score: 164.851 bits (416), Expect = 5.502e-40
Identity = 84/216 (38.89%), Postives = 133/216 (61.57%), Query Frame = 3
Query:  222 VHRKNRTGFEEDKNFHV-VLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIW 866
            V+  N + ++ ++  ++ V +  +A RY + + +G  +F + I+A+D  T   V +KI++N K F  Q+ +EI++L ++ +HD  +  +++ ++DYF +R H  I  ELL  NLYE  K N   G  +        S+ +QCL+AL   +   +IHCD+KPEN+L+K   R  +KVID GSSCFE   + +Y+QSR YRAPEVILG  Y + ID+W
Sbjct:  249 VYGPNNSEYDNEQGAYIHVPHDHVAYRYEMLKIIGKGSFGQVIKAYDHKTHEHVALKIVRNEKRFHRQAQEEIRILHHLRRHDKYNTMNIIHMFDYFTFRNHTCITFELLSINLYELIKKNGFKGFSLQLVRKFAHSL-LQCLDAL---YKNDIIHCDMKPENVLLKQQGRSGIKVIDFGSSCFENQRIYTYIQSRFYRAPEVILGGKYGRAIDMW 460          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: DYRK2_HUMAN (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Homo sapiens GN=DYRK2 PE=1 SV=3)

HSP 1 Score: 164.851 bits (416), Expect = 5.502e-40
Identity = 82/212 (38.68%), Postives = 130/212 (61.32%), Query Frame = 3
Query:  234 NRTGFEEDKNFHV-VLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIW 866
            N  G+++D+  +V V +  +A RY V + +G  +F + ++A+D      V +K+++N K F  Q+ +EI++L+++ K D  +  +++ + + F +R H+ +  ELL  NLYE  K N+  G    F++P ++      L+ L  LH   +IHCDLKPENIL+K   R  +KVID GSSC+E   + +Y+QSR YRAPEVILG  Y   ID+W
Sbjct:  199 NNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG----FSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMW 406          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: DYRK2_DROME (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Drosophila melanogaster GN=smi35A PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.385e-40
Identity = 82/209 (39.23%), Postives = 128/209 (61.24%), Query Frame = 3
Query:  243 GFEEDK-NFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIW 866
            G+++D  N+ ++ +  IA RY + E +G  +F + I+A D  T   V +KII+N K F +Q++ E+ +L  + + D    ++++ + DY Y+R+HL I  EL+  NLYE  K N  +G    F+M  ++      ++ L+ L+   +IHCDLKPENIL+K      +KVID GSSC+    + +Y+QSR YR+PEVILGL Y   ID+W
Sbjct:  178 GYDDDNGNYKIIEHDHIAFRYEILEVIGKGSFGQVIRALDHKTNTHVAIKIIRNKKRFLNQAVVELNILDELREKDADGSHNVIHMLDYTYFRKHLCITFELMSLNLYELIKKNNYNG----FSMSLIRRFCNSIVKCLRLLYKENIIHCDLKPENILLKQRGSSSIKVIDFGSSCYVDRKIYTYIQSRFYRSPEVILGLQYGTAIDMW 382          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: PPK5_SCHPO (Serine/threonine-protein kinase ppk5 OS=Schizosaccharomyces pombe GN=ppk5 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.945e-39
Identity = 82/212 (38.68%), Postives = 130/212 (61.32%), Query Frame = 3
Query:  234 NRTGFEEDK-NFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIW 866
            N   F++D  ++  +    +  RY + + +G  +F + ++  D   G  V +K+IKN + F  Q+L E+ +LK + + DP DK +++R   +F +R HL IV ELL +NL++  + N   G      +  ++S  +Q L+AL+ L G  +IHCDLKPEN+L+    +  +K+ID GSSCF  + + +Y+QSR YRAPE+ILGL Y K+IDIW
Sbjct:  495 NEALFDDDNGDYKAIQGDHLLYRYEIIDTVGKGSFGQVLKCIDHKRGQVVAIKVIKNRQKFHGQTLVEVGILKRLCEADPADKNNVIRYLSHFDFRGHLCIVTELLGSNLFDVIRENNYKG----LPLIVVKSFALQGLQALRLLQGQNIIHCDLKPENLLLSHPLKARIKLIDFGSSCFYNEKVYTYLQSRFYRAPEIILGLEYGKEIDIW 702          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: MBK2_CAEEL (Dual specificity tyrosine-phosphorylation-regulated kinase mbk-2 OS=Caenorhabditis elegans GN=mbk-2 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.038e-38
Identity = 82/217 (37.79%), Postives = 128/217 (58.99%), Query Frame = 3
Query:  219 IVHRKNRTGFEEDK-NFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIW 866
            ++   N  G++++  ++ +V++  IA RY V + +G  +F + I+A D      V +K+++N K F  Q+ +EI++L ++ + D    ++++ + DYF +R H  I  ELL  NLYE  K N+  G    F++  ++      L  L  L    LIHCDLKPEN+L+K   R  +KVID GSSCF+   + +Y+QSR YRAPEVILG  Y   ID+W
Sbjct:  433 VIGGANNGGYDDENGSYQLVVHDHIAYRYEVLKVIGKGSFGQVIKAFDHKYQQYVALKLVRNEKRFHRQADEEIRILDHLRRQDSDGTHNIIHMLDYFNFRNHKCITFELLSINLYELIKRNKFQG----FSLMLVRKFAYSMLLCLDLLQKNRLIHCDLKPENVLLKQQGRSGIKVIDFGSSCFDDQRIYTYIQSRFYRAPEVILGTKYGMPIDMW 645          
The following BLAST results are available for this feature:
BLAST of CX078413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 345
Match NameE-valueIdentityDescription
DYRK2_DICDI9.689e-4543.06Probable serine/threonine-protein kinase dyrk2 OS=... [more]
POM1_SCHPO3.117e-4344.02Dual specificity protein kinase pom1 OS=Schizosacc... [more]
DYRK4_HUMAN1.891e-4041.51Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK2_MOUSE3.225e-4038.68Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK2_CHICK3.225e-4037.79Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK3_DROME5.502e-4038.89Putative dual specificity tyrosine-phosphorylation... [more]
DYRK2_HUMAN5.502e-4038.68Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK2_DROME9.385e-4039.23Dual specificity tyrosine-phosphorylation-regulate... [more]
PPK5_SCHPO7.945e-3938.68Serine/threonine-protein kinase ppk5 OS=Schizosacc... [more]
MBK2_CAEEL1.038e-3837.79Dual specificity tyrosine-phosphorylation-regulate... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_8H06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-8H06-P12-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078413 ID=CX078413; Name=CX078413; organism=Citrus sinensis; type=EST; length=866bp
CAAATAATGCAAATGCTGTAAGATCAGCAAATTCTTCTCCTTCCACCCTT
TCGAATTATGAACGAGAGCATGTAAAGAGAGAGGAAGCTGAAAAAATTAG
TGGCATGAGGGAAGAGGATCCAGGTGCATCCCTTGAGGATGAAGAAGCAG
CTGCAGTACAAGAGCAAGTAAGGCAAATCAAAGCTCAGGAGGAGGAATTT
GAGACTTTCAATTTAAAAATTGTGCATAGAAAAAACAGAACTGGCTTTGA
GGAGGACAAGAATTTCCACGTTGTTTTGAATTCTGTCATAGCTGGGCGTT
ATCATGTTACTGAGTATCTGGGATCAGCTGCGTTTAGCAAAGCTATACAA
GCACATGACCTTCACACAGGCATGGATGTTTGTGTGAAAATTATTAAGAA
CAACAAAGATTTTTTTGATCAAAGCCTCGATGAGATAAAGCTTCTCAAGT
ATGTCAACAAGCATGATCCCGGAGACAAATACCATCTTCTGCGTTTGTAT
GATTATTTCTACTATCGAGAGCATCTGCTAATAGTATGTGAGCTCCTGAA
GGCAAACTTGTATGAGTTCCATAAATTTAATAGAGAATCCGGAGGAGAGG
TCTATTTCACGATGCCAAGGTTGCAGTCTATTACTATCCAGTGTCTTGAA
GCTCTTCAATTCTTGCACGGCCTTGGACTTATTCATTGTGATTTGAAGCC
TGAAAATATCTTAGTGAAAAGTTATAGTAGATGTGAGGTGAAGGTCATTG
ATCTTGGGAGTAGCTGTTTTGAGACAGATCATCTCTGCTCCTATGTTCAA
TCCAGGTCCTATCGTGCACCAGAAGTTATCCTTGGACTGTCATACGATAA
GAAGATAGACATATGG
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