CX078398

Overview
NameCX078398
Unique NameCX078398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078398 vs. ExPASy Swiss-Prot
Match: PCP_BOVIN (Lysosomal Pro-X carboxypeptidase OS=Bos taurus GN=PRCP PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.179e-38
Identity = 76/179 (42.46%), Postives = 113/179 (63.13%), Query Frame = -2
Query:  336 NAPDATSILERIFEGVSVYYNYTGNVDCFQLDDDPH---GLDGWNWQACTEMVMPMSSSRDKSMFPAYDYNYSSFKEECWNDFNVIPRPRWITTEFGGHDIKSVLKLFGSNIIFSNGLLDPWSGGSVLQNLSETIVALVTEEGAHHLDLRPSTNEDPDWLKKQRETEIKLIEGWIDNYY 863
            N PD T +++ IF+ ++VYYNY+G   C  + +      G+ GW++QACTEMVMP  S     MF  + +N   + ++C+  + V PRP WI T +GG +I S      +NIIFSNG LDPWSGG V +++++T++A+V   GAHHLDLR S   DP  ++  R  E+K ++ WI ++Y
Sbjct:  320 NVPD-TVMVQNIFQALNVYYNYSGQAKCLNVSETATSSLGVLGWSYQACTEMVMPTCSDGVDDMFEPHSWNMKEYSDDCFKQWGVRPRPSWIPTMYGGKNISS-----HTNIIFSNGELDPWSGGGVTKDITDTLLAIVIPNGAHHLDLRASNALDPVSVQLTRSLEVKYMKQWISDFY 492          
BLAST of CX078398 vs. ExPASy Swiss-Prot
Match: PCP_PONAB (Lysosomal Pro-X carboxypeptidase OS=Pongo abelii GN=PRCP PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.276e-36
Identity = 71/172 (41.28%), Postives = 108/172 (62.79%), Query Frame = -2
Query:  336 ILERIFEGVSVYYNYTGNVDCFQLDDDPH---GLDGWNWQACTEMVMPMSSSRDKSMFPAYDYNYSSFKEECWNDFNVIPRPRWITTEFGGHDIKSVLKLFGSNIIFSNGLLDPWSGGSVLQNLSETIVALVTEEGAHHLDLRPSTNEDPDWLKKQRETEIKLIEGWIDNYY 842
            +L+ IF+ ++VYYNY+G V C  + +      G  GW++QACTE+VMP  ++    MF  + +N     ++C+  + V PRP WITT +GG +I S      +NI+FSNG LDPWSGG V +++++T+VA+   EGAHHLDLR     DP  +   R  E++ ++ WI ++Y
Sbjct:  323 LLQNIFQALNVYYNYSGQVKCLNISETATSSLGTLGWSYQACTEVVMPFCTNGVDDMFEPHSWNLKELSDDCFQQWGVRPRPSWITTMYGGKNISS-----HTNIVFSNGELDPWSGGGVTKDITDTLVAVTISEGAHHLDLRTKNALDPTSVLLARSLEVRHMKNWIRDFY 489          
BLAST of CX078398 vs. ExPASy Swiss-Prot
Match: PCP_HUMAN (Lysosomal Pro-X carboxypeptidase OS=Homo sapiens GN=PRCP PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.176e-36
Identity = 71/172 (41.28%), Postives = 108/172 (62.79%), Query Frame = -2
Query:  336 ILERIFEGVSVYYNYTGNVDCFQLDDDPH---GLDGWNWQACTEMVMPMSSSRDKSMFPAYDYNYSSFKEECWNDFNVIPRPRWITTEFGGHDIKSVLKLFGSNIIFSNGLLDPWSGGSVLQNLSETIVALVTEEGAHHLDLRPSTNEDPDWLKKQRETEIKLIEGWIDNYY 842
            +L+ IF+ ++VYYNY+G V C  + +      G  GW++QACTE+VMP  ++    MF  + +N     ++C+  + V PRP WITT +GG +I S      +NI+FSNG LDPWSGG V +++++T+VA+   EGAHHLDLR     DP  +   R  E++ ++ WI ++Y
Sbjct:  323 LLQNIFQALNVYYNYSGQVKCLNISETATSSLGTLGWSYQACTEVVMPFCTNGVDDMFEPHSWNLKELSDDCFQQWGVRPRPSWITTMYGGKNISS-----HTNIVFSNGELDPWSGGGVTKDITDTLVAVTISEGAHHLDLRTKNALDPMSVLLARSLEVRHMKNWIRDFY 489          
BLAST of CX078398 vs. ExPASy Swiss-Prot
Match: PCP_MOUSE (Lysosomal Pro-X carboxypeptidase OS=Mus musculus GN=Prcp PE=2 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 4.848e-36
Identity = 74/174 (42.53%), Postives = 108/174 (62.07%), Query Frame = -2
Query:  336 TSILERIFEGVSVYYNYTGNVDCFQLDDDPH---GLDGWNWQACTEMVMPMSSSRDKSMFPAYDYNYSSFKEECWNDFNVIPRPRWITTEFGGHDIKSVLKLFGSNIIFSNGLLDPWSGGSVLQNLSETIVALVTEEGAHHLDLRPSTNEDPDWLKKQRETEIKLIEGWIDNYY 848
            T +L+ IF+ +SVYYNY+G   C  +        G  GW++QACTEMVMP  ++    MF  + ++   +  +C+N + V PRP W+TT +GG +I S      SNIIFSNG LDPWSGG V +++++T+VA+   +GAHHLDLR     DP  +   R  E+K ++ WI ++Y
Sbjct:  319 TVLLQNIFQALSVYYNYSGQAACLNISQTTTSSLGSMGWSFQACTEMVMPFCTNGIDDMFEPFLWDLEKYSNDCFNQWGVKPRPHWMTTMYGGKNISS-----HSNIIFSNGELDPWSGGGVTRDITDTLVAINIHDGAHHLDLRAHNAFDPSSVLLSRLLEVKHMKKWILDFY 487          
BLAST of CX078398 vs. ExPASy Swiss-Prot
Match: DPP2_RAT (Dipeptidyl-peptidase 2 OS=Rattus norvegicus GN=Dpp7 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.372e-27
Identity = 65/165 (39.39%), Postives = 93/165 (56.36%), Query Frame = -2
Query:  348 YNYTGNVDCFQLDD------DPHGLD------GWNWQACTEMVMPMSSSRDKSMFPAYDYNYSSFKEECWNDFNVIPRPRWITTEFGGHDIKSVLKLFGSNIIFSNGLLDPWSGGSVLQNLSETIVALVTEEGAHHLDLRPSTNEDPDWLKKQRETEIKLIEGWI 806
            YN +G   CF +        DP G         W++QACTE+ +   S+    MFP   ++    ++ C + + V PRP W+ T F G D+K+      SNIIFSNG LDPW+GG + +NLS +I+A+  + GAHHLDLR S +EDP  + + R+ E  LI  W+
Sbjct:  324 YNSSGMEPCFDIYQMYQSCADPTGCGTGSNARAWDYQACTEINLTFDSNNVTDMFPEIPFSDELRQQYCLDTWGVWPRPDWLQTSFWGGDLKAA-----SNIIFSNGDLDPWAGGGIQRNLSTSIIAVTIQGGAHHLDLRASNSEDPPSVVEVRKLEATLIREWV 483          
BLAST of CX078398 vs. ExPASy Swiss-Prot
Match: DPP2_MOUSE (Dipeptidyl-peptidase 2 OS=Mus musculus GN=Dpp7 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.323e-25
Identity = 63/165 (38.18%), Postives = 91/165 (55.15%), Query Frame = -2
Query:  348 YNYTGNVDCF------QLDDDPHGLD------GWNWQACTEMVMPMSSSRDKSMFPAYDYNYSSFKEECWNDFNVIPRPRWITTEFGGHDIKSVLKLFGSNIIFSNGLLDPWSGGSVLQNLSETIVALVTEEGAHHLDLRPSTNEDPDWLKKQRETEIKLIEGWI 806
            YN +G   C+      Q   DP G         W++QACTE+ +   S+    MFP   ++    ++ C + + V PR  W+ T F G D+K+      SNIIFSNG LDPW+GG +  NLS +++A+  + GAHHLDLR S +EDP  + + R+ E  LI  W+
Sbjct:  324 YNSSGTEPCYDIYRLYQSCADPTGCGTGSDARAWDYQACTEINLTFDSNNVTDMFPEIPFSEELRQQYCLDTWGVWPRQDWLQTSFWGGDLKAA-----SNIIFSNGDLDPWAGGGIQSNLSTSVIAVTIQGGAHHLDLRASNSEDPPSVVEVRKLESTLIREWV 483          
BLAST of CX078398 vs. ExPASy Swiss-Prot
Match: DPP2_HUMAN (Dipeptidyl-peptidase 2 OS=Homo sapiens GN=DPP7 PE=1 SV=3)

HSP 1 Score: 115.161 bits (287), Expect = 5.028e-25
Identity = 61/165 (36.97%), Postives = 92/165 (55.76%), Query Frame = -2
Query:  348 YNYTGNVDCFQLDD------DPHGLD------GWNWQACTEMVMPMSSSRDKSMFPAYDYNYSSFKEECWNDFNVIPRPRWITTEFGGHDIKSVLKLFGSNIIFSNGLLDPWSGGSVLQNLSETIVALVTEEGAHHLDLRPSTNEDPDWLKKQRETEIKLIEGWI 806
            YN +G+  C+ +        DP G         W++QACTE+ +  +S+    MFP   +     +  C + + V PRP W+ T F G D+++      SNIIFSNG LDPW+GG + +NLS +++A+  + GAHHLDLR S  EDP  + + R+ E  +I  W+
Sbjct:  314 YNASGSEHCYDIYRLYHSCADPTGCGTGPDARAWDYQACTEINLTFASNNVTDMFPDLPFTDELRQRYCLDTWGVWPRPDWLLTSFWGGDLRAA-----SNIIFSNGNLDPWAGGGIRRNLSASVIAVTIQGGAHHLDLRASHPEDPASVVEARKLEATIIGEWV 473          
BLAST of CX078398 vs. ExPASy Swiss-Prot
Match: PCP5_CAEEL (Prolyl carboxy peptidase like protein 5 OS=Caenorhabditis elegans GN=pcp-5 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.672e-18
Identity = 63/181 (34.81%), Postives = 95/181 (52.49%), Query Frame = -2
Query:  348 ERIFEGVSVYYNYTGN-----VDCFQLDDDPHGLD---GWNWQACTEMVMPMSSSRDKSMFPAYDYNYSSFK--EECWNDFNVIP------RPRWITTEFGGHDIKSVLKLFGSNIIFSNGLLDPWSGGSV--LQNLSETIVALVTEEGAHHLDLRPSTNEDPDWLKKQRETEIKLIEGWI 836
            E++++ V++YYNYTG+      +  + D     L    GW +Q CTEMVMP+  S   + F   D  ++S K  E C   F+ I       RP      FG   + S      SNI+FSNG LDPWSGG       +  ++++++ ++GAHH DLR +  +D + +KK R  E + I+ WI
Sbjct:  321 EQLYKIVNLYYNYTGDKSTHCANAAKCDSAYGSLGDPLGWPFQTCTEMVMPLCGSGYPNDFFWKDCPFTSEKYAEFCMQTFSSIHYNKTLLRPLAGGLAFGATSLPSA-----SNIVFSNGYLDPWSGGGYDHSDKVQGSVISVILKQGAHHYDLRGAHPQDTEEVKKVRAMETQAIKKWI 496          
BLAST of CX078398 vs. ExPASy Swiss-Prot
Match: PCP1_CAEEL (Putative serine protease pcp-1 OS=Caenorhabditis elegans GN=pcp-1 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 9.206e-11
Identity = 53/195 (27.18%), Postives = 82/195 (42.05%), Query Frame = -2
Query:  345 ILERIFEGVSVYYNYTGNVD---CFQL----DDDPHGLDG----WNWQACTEMVMPMSSSRDKSMFPAYDYNYSSFKEECWNDF---------NVIPRPRWITTEFGGHDIKSVLKLFG------SNIIFSNGLLDPWSGGSVL---QNLSETIVALVTEEGAHHLDLRPSTNEDPDWLKKQRETEIKLIEGWID 842
            +++ +    ++YYNY  + +   C       D    GL G    W WQ C+E++M M +S   +           F  EC  D          ++     W    +   +I +V  L+G      SN+I + G LDPWSGG       N +  I  L     AHHLDLR     DP+ +   R   I++++ W+D
Sbjct:  328 LVKAVANAANIYYNYNRDPNFTYCIDFSICGDQGTGGLGGDELGWPWQECSEIIMAMCASGGSN---------DVFWNECGKDIYQTLQQGCVSIFKSMGWTPKNW---NIDAVKTLYGYDLSGSSNLILTQGHLDPWSGGGYKVDQNNAARGIYVLEIPGSAHHLDLRQPNTCDPNTVTNARFQIIQILKCWVD 510          
The following BLAST results are available for this feature:
BLAST of CX078398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
PCP_BOVIN5.179e-3842.46Lysosomal Pro-X carboxypeptidase OS=Bos taurus GN=... [more]
PCP_PONAB1.276e-3641.28Lysosomal Pro-X carboxypeptidase OS=Pongo abelii G... [more]
PCP_HUMAN2.176e-3641.28Lysosomal Pro-X carboxypeptidase OS=Homo sapiens G... [more]
PCP_MOUSE4.848e-3642.53Lysosomal Pro-X carboxypeptidase OS=Mus musculus G... [more]
DPP2_RAT5.372e-2739.39Dipeptidyl-peptidase 2 OS=Rattus norvegicus GN=Dpp... [more]
DPP2_MOUSE1.323e-2538.18Dipeptidyl-peptidase 2 OS=Mus musculus GN=Dpp7 PE=... [more]
DPP2_HUMAN5.028e-2536.97Dipeptidyl-peptidase 2 OS=Homo sapiens GN=DPP7 PE=... [more]
PCP5_CAEEL2.672e-1834.81Prolyl carboxy peptidase like protein 5 OS=Caenorh... [more]
PCP1_CAEEL9.206e-1127.18Putative serine protease pcp-1 OS=Caenorhabditis e... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_8G10_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-8G10-N20-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078398 ID=CX078398; Name=CX078398; organism=Citrus sinensis; type=EST; length=870bp
TTTTTTTTTGCTTCTGACCCTATCAGATTCCATCCAAAAAGGTCATCTTG
GTACAAGGAAACATGCAAGCAACATAAGGAAGAACTGGTGAACACATATA
CCGCCTGCAAACTATCACCCACACAGAACGTCAATGTAACTTCATCCCCT
TAGGGAAAGAAAAATATCTTTCTATTTACAATACAAGGTTCCGTAGTGCC
AGTGAAATGTTTTGACTGAGGGGAAATGTCAGCTGCCAAAATAGAATAAA
CAGATATTAAGAGAAAGAGATTTACACAAATACTTATCTCGACCATCTTT
AAGTCCTACATGTTGAAAGTTGCTTTCTTCCCCCGATAGTAGTTATCAAT
CCAGCCTTCAATCAGCTTAATTTCAGTTTCCCTCTGCTTTTTCAACCAGT
CTGGATCCTCATTGGTAGAAGGACGCAAATCCAAGTGATGAGCACCTTCT
TCTGTGACAAGAGCAACAATAGTTTCAGATAGATTCTGCAGAACACTGCC
ACCACTCCAAGGATCTAATAGACCGTTTGAGAAAATAATGTTACTTCCAA
ACAGTTTCAACACACTCTTGATATCATGTCCGCCAAATTCTGTGGTTATC
CATCGCGGTCTTGGTATCACGTTGAAATCATTCCAGCATTCCTCTTTAAA
AGAGGAGTAATTATAATCATATGCAGGAAACATGCTTTTATCTCGGCTAC
TAGACATTGGCATAACCATCTCAGTGCATGCCTGCCAGTTCCACCCATCC
AAGCCATGAGGATCATCATCCAGTTGAAAGCAGTCAACATTTCCAGTATA
ATTGTAATAGACACTTACTCCTTCAAATATGCGCTCCAGAATGCTGGTAG
CATCTGGAGCATTGTCAATT
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