CX078383

Overview
NameCX078383
Unique NameCX078383
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length825
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX078383 vs. ExPASy Swiss-Prot
Match: BGA16_ARATH (Beta-galactosidase 16 OS=Arabidopsis thaliana GN=BGAL16 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.354e-15
Identity = 46/109 (42.20%), Postives = 58/109 (53.21%), Query Frame = -3 
Query:  497 INACNGRKCGETFKGPNSP-Q*AIYMDRKLDFSVFIAL*YIME*IFVSIVYFILLLCYLVFYLASHKSFWLL*RYQAYGEDPIGRTADDIAFHVALWVARNGSFVNYYM 820
            +NACNGR+CGETFKGPNSP + AI+ +    F                                          YQ YGE+P+ R+A+DIAFHVAL++A+NGSFVNYYM
Sbjct:  226 VNACNGRQCGETFKGPNSPNKPAIWTENWTSF------------------------------------------YQTYGEEPLIRSAEDIAFHVALFIAKNGSFVNYYM 292
The following BLAST results are available for this feature:
BLAST of CX078383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
BGA16_ARATH4.354e-1542.20Beta-galactosidase 16 OS=Arabidopsis thaliana GN=B... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_8G02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-8G02-N4-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078383 ID=CX078383; Name=CX078383; organism=Citrus sinensis; type=EST; length=825bp
TTAACCACACAAAATACATAATTAATTCATAGAACAATTTAAAAGAAAAA
CACACACACACACACAAACACACACAACAAATCCTCCGAACGTAACTACA
GAATTAACATATACACTGTCAATAAGATACATGCTTCTTTGTTTTTTGTA
ATTTAAGATAATCATCACATCAGTTAGTCCTTGTATTTAAAAATGATCTA
AAACATCTATGTTATTATTTTTGTATCTATGGGATACGATTTTTCAACAG
TTAAATAGTATTTGTCTTGTATAACTTACAAATTCAAACAAATATGACAT
CAACAGATGAACAGATAGATGATAATTAAATATATTTCTAATATATATAC
ATAGACACACACACATATTATAAATACACACATGATACATGTATGATAGA
AATTGTTTAAGTGAGATCAACTGAGAGAACATACATATACAACATCAATC
CACTATATATAAATATGAGGTACCGGAAGGATTATAATTCTTTTACCATA
TAATAATTTACAAAGCTTCCATTCCTCGCAACCCATAATGCAACATGAAA
TGCTATGTCGTCAGCAGTTCTTCCTATTGGATCTTCACCGTATGCTTGAT
ACCTTCAAAGCAACCAAAAGGATTTGTGCGAAGCAAGATAGAAAACCAAA
TAACATAACAACAGAATAAAGTANACAATCGAAACAAAAATTTATTCCAT
GATATATTATAATGCTATAAATACCGAGAAGTCCAATTTTCTGTCCATAT
AGATGGCTTATTGGGGAGAATTTGGCCCCTTAAATGTCTCCCCACATTTC
CTCCCATTGCATGCATTTATCTGCA
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