CX078380
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX078380 vs. ExPASy Swiss-Prot
Match: WOX11_ARATH (WUSCHEL-related homeobox 11 OS=Arabidopsis thaliana GN=WOX11 PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 7.084e-61 Identity = 137/265 (51.70%), Postives = 164/265 (61.89%), Query Frame = -2 Query: 87 SRGSAERSTEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNXXXXXXXXXXXXXXXXAGEXXXXXXXXXXXXXXXXXXQYEINSNCAAAALPMGFAATSPATFGSTPCTNFVAGSSSFCGVMGGG------DGVETLYSVSGQMGFQEVV-----DQNSSVTSMLCPSE-SSNLQYQTGFITVFINGAPTEIPRGPIDMKALFGQDVVLVHSSGVPIPTNEFGFLMQSLQHGESYFLVSR 845 S S S EPVRSRW+PKPEQILILESIF+SGMVNPPK+ETVRIRK+LEKFG+VGDANVFYWFQN A NS + +GF G + +N++ SSS GGG G+E L ++SGQM + E + +S+VTS+LCPS+ +SN YQ G ITVFING PTE+ RG IDMKA FG+D+VLVHSSGVP+PT+EFGFLM SLQHGE+YFLV R Sbjct: 19 SSASGSTSAEPVRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDANVFYWFQNRRSRSRRRQRQLQAAAAAAAATTNTCDQTMMVS--------NSLPHHSGSDLGFG-------GCSTSSNYLFASSS--SSYGGGCDNQSNSGMENLLTMSGQMSYHEATHHHYQNHSSNVTSILCPSDQNSNFHYQQGAITVFINGVPTEVTRGGIDMKATFGEDLVLVHSSGVPLPTDEFGFLMHSLQHGEAYFLVPR 266
BLAST of CX078380 vs. ExPASy Swiss-Prot
Match: WOX12_ARATH (WUSCHEL-related homeobox 12 OS=Arabidopsis thaliana GN=WOX12 PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.405e-55 Identity = 125/264 (47.35%), Postives = 157/264 (59.47%), Query Frame = -2 Query: 87 SRGSAERSTEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNXXXXXXXXXXXXXXXXAGEXXXXXXXXXXXXXXXXXXQYEINSNCAAAALPMGFAATSPAT-------FGSTPCTNFVAGSSSFCGVMGGGDGVETLYSVSGQMGFQEVVDQ--NSSVTSMLCPS-ESSNLQY-QTGFITVFINGAPTEIPRGPIDMKALFGQDVVLVHSSGVPIPTNEFGFLMQSLQHGESYFLVSR 845 S + STEPVR+RW+PKPEQILILESIFNSG VNPPKDETVRIRK+LEKFG+VGDANVFYWFQN QY ++N + +GF + S + S+ +F G SS G +G+E L+ + G Q +S+ S+L PS ++SN QY Q GF+TVFING P E+ +G IDMK +FG D VL+HSSG+P+PT+EFGFLM SLQHG++YFLV R Sbjct: 7 SHSPSSTSTEPVRARWSPKPEQILILESIFNSGTVNPPKDETVRIRKMLEKFGAVGDANVFYWFQNRRSRSRRRHRQLLAATTAAATSIGAEDHQHMTAMSMHQYPCSNN----EIDLGFGSCSNLSANYFLNGSSSSQIPSFFLGLSSSSGGCENNNGMENLFKMYGHESDHNHQQQHHSSNAASVLNPSDQNSNSQYEQEGFMTVFINGVPMEVTKGAIDMKTMFGDDSVLLHSSGLPLPTDEFGFLMHSLQHGQTYFLVPR 266
BLAST of CX078380 vs. ExPASy Swiss-Prot
Match: WOX11_ORYSJ (WUSCHEL-related homeobox 11 OS=Oryza sativa subsp. japonica GN=WOX11 PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.749e-51 Identity = 117/257 (45.53%), Postives = 152/257 (59.14%), Query Frame = -2 Query: 87 RGSAERSTEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNXXXXXXXXXXXXXXXXAGEXXXXXXXXXXXXXXXXXXQYEINSNCAAAALPMGFAATSPATFGSTPCTNFVAGSSSFCGVMGG---GDGVETLYSVSGQMGFQEVVDQNSSVTSMLCPSESSNLQY--QTGFITVFINGAPTEIPRGPIDMKALFGQDVVLVHSSGVPIPTNEFGFLMQSLQHGESYFLVSR 842 R +A + EPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLE+FG+VGDANVFYWFQN + + A +G A A + S+ +++ + S +MG G G + L+++S QMG+ + SS ++ + L Y Q +TVFING TE+PRGPID++++FGQDV+LVHS+G +P NE+G L+ SLQ GESYFLV+R Sbjct: 9 RHAAAAAGEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRRSRSRRRQRQLQAQAQAAAAAASSGSPPTASSGGLAP----GHAGSPASSLGMFAHGAAGYSSSSSSSWPSSPPSVGMMMGDVDYGGGGDDLFAISRQMGYMD-GGGGSSSSAAAGQHQQQQLYYSCQPATMTVFINGVATEVPRGPIDLRSMFGQDVMLVHSTGALLPANEYGILLHSLQMGESYFLVTR 260
BLAST of CX078380 vs. ExPASy Swiss-Prot
Match: WOX6_ORYSJ (WUSCHEL-related homeobox 6 OS=Oryza sativa subsp. japonica GN=WOX6 PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 6.220e-49 Identity = 132/310 (42.58%), Postives = 159/310 (51.29%), Query Frame = -2 Query: 84 GSAERSTEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNXXXXXXXXXXXXXXXXAGEXXXXXXXXXXXXXXXXXXQYEINSNCAAAA-------LPMGFAATSPATFGSTPCTNFVAGSSSFCGVMGG--------------------------------------GDGVET-----LYSVSGQMGFQEVVDQNSSVTSMLCPSESS--------NLQYQTGFITVFINGAPTEIPRGPIDMKALFGQDVVLVHSSGVPIPTNEFGFLMQSLQHGESYFLVSRP 839 G + EPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLE+FG+VGDANVFYWFQN A N++ AAA+ LP G + A GS A SSS G GG GD V++ L+++S QMGF + S +S PS ++ + Q ITVFING P E+PRGPID++A+FGQDV+LVHS+G +P N++G LMQSLQ GESYFLV+RP Sbjct: 30 GGRSAAGEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRRSRSRRRQRQMQAAAAAAAAAASSSSP-----------SANTSPAAASAATVQVGLPPGAVVHTMAMGGSACQYEQQASSSSSSGSTGGSSLGLFAHGAGASGAGGYLQASCGASASASSALAPGLMGDVVDSGGSDDLFAISRQMGFVG-SPRCSPASSPATPSSAATAAQQQFYSCQLPAATITVFINGVPMEMPRGPIDLRAMFGQDVMLVHSTGALLPVNDYGILMQSLQIGESYFLVARP 327
BLAST of CX078380 vs. ExPASy Swiss-Prot
Match: WOX10_ORYSJ (WUSCHEL-related homeobox 10 OS=Oryza sativa subsp. japonica GN=WOX10 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.774e-41 Identity = 103/246 (41.87%), Postives = 127/246 (51.63%), Query Frame = -2 Query: 87 EPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNXXXXXXXXXXXXXXXXAGEXXXXXXXXXXXXXXXXXXQYEINSNCAAAALPMGFAATSPATFGSTPCTNFVAGSSSFCGVMGGGDGVETLYSVSGQMGFQEVVDQNSSVTSMLCPSESSNLQYQ-TGFITVFINGAPTEIPR-GPIDMKALFGQDVVLVHSSGVPIPTNEFGFLMQSLQHGESYFLVSR 818 EP RSRW PKPEQILILESIFNSGMVNP KDET RIR+LLE+FG+V DANVFYWFQN Y + +++ M ST VA S F G G + L+++S QMG S S+++ L YQ TG I VFING ++P G +DM FG+D +LVHSSG +P +E G L+ SLQ GE Y+LVS+ Sbjct: 38 EPARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDANVFYWFQNRRSRSRRRARQLQQACGAALHQLPSAAAAAGAGGGGDYYHHHHQPSSSPFLM-HGGGGGGVVTSTTAAPAVAASGHFLADEVDGGGDDDLFAISRQMGLMARHGGGDHHYSSYADSDATQLSYQPTGTIQVFINGVAYDVPSGGALDMAGTFGRDAMLVHSSGEVLPVDEHGVLINSLQMGECYYLVSK 282
BLAST of CX078380 vs. ExPASy Swiss-Prot
Match: WOX10_ORYSI (WUSCHEL-related homeobox 10 OS=Oryza sativa subsp. indica GN=WOX10 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.389e-40 Identity = 102/246 (41.46%), Postives = 126/246 (51.22%), Query Frame = -2 Query: 87 EPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNXXXXXXXXXXXXXXXXAGEXXXXXXXXXXXXXXXXXXQYEINSNCAAAALPMGFAATSPATFGSTPCTNFVAGSSSFCGVMGGGDGVETLYSVSGQMGFQEVVDQNSSVTSMLCPSESSNLQYQ-TGFITVFINGAPTEIPR-GPIDMKALFGQDVVLVHSSGVPIPTNEFGFLMQSLQHGESYFLVSR 818 EP RSRW PKPEQILILESIFNSGMVNP KDET RIR+LLE+FG+V DANVFYWFQN Y + +++ M ST VA S F G G + L+++S QMG S+++ L YQ TG I VFING ++P G +DM FG+D +LVHSSG +P +E G L+ SLQ GE Y+LVS+ Sbjct: 38 EPARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDANVFYWFQNRRSRSRRRARQLQQACGAALHQLPSAAAAAGAGGGGGYYHHHHQPSSSPFLM-HGGGGGGVVTSTTAAPAVAASGHFLADEVDGGGDDDLFAISRQMGLMARHGGGDHHYGSYADSDATQLSYQPTGTIQVFINGVAYDVPSGGALDMAGTFGRDAMLVHSSGEVLPVDEHGVLINSLQMGECYYLVSK 282
BLAST of CX078380 vs. ExPASy Swiss-Prot
Match: WOX6_ORYSI (WUSCHEL-related homeobox 6 OS=Oryza sativa subsp. indica GN=WOX6 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.141e-26 Identity = 56/64 (87.50%), Postives = 59/64 (92.19%), Query Frame = -2 Query: 648 GSAERSTEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQN 839 G + EPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLE+FG+VGDANVFYWFQN Sbjct: 30 GGRSAAGEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQN 93 HSP 2 Score: 107.842 bits (268), Expect = 7.657e-23 Identity = 64/148 (43.24%), Postives = 88/148 (59.46%), Query Frame = -2 Query: 84 GFAATSPATFGSTPCTNFVAGSSSFC-GVMGG---GDGVETLYSVSGQMGFQEVVDQNSSVTSMLCPSESSNLQYQTGF--------ITVFINGAPTEIPRGPIDMKALFGQDVVLVHSSGVPIPTNEFGFLMQSLQHGESYFLVSRP 491 G A+ + C + SS+ G+MG G + L+++S QMGF + S +S PS ++ Q + ITVFING P E+PRGPID++A+FGQDV+LVHS+G +P N++G LMQSLQ GESYFLV+RP Sbjct: 181 GAGASGAGGYLQASCGASASASSALAPGLMGDVVDSGGSDDLFAISRQMGFVGS-PRCSPASSPATPSSAATAAQQQFYSCQLPAATITVFINGVPMEMPRGPIDLRAMFGQDVMLVHSTGALLPVNDYGILMQSLQIGESYFLVARP 327
BLAST of CX078380 vs. ExPASy Swiss-Prot
Match: WOX9_ARATH (WUSCHEL-related homeobox 9 OS=Arabidopsis thaliana GN=WOX9 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.760e-19 Identity = 44/61 (72.13%), Postives = 51/61 (83.61%), Query Frame = -2 Query: 648 ERSTEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQN 830 ERS EP + RW PKPEQI ILE+IFNSGMVNPP++E RIR L+++G VGDANVFYWFQN Sbjct: 47 ERSPEP-KPRWNPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQN 106 HSP 2 Score: 67.0106 bits (162), Expect = 2.298e-11 Identity = 33/72 (45.83%), Postives = 47/72 (65.28%), Query Frame = -2 Query: 93 PSESSNLQYQTGF-ITVFINGAPTEIPRGPIDMKALFGQDVVLVHSSGVPIPTNEFGFLMQSLQHGESYFLV 305 PS S LQ Q I VFIN E+ GP +++ FG++VVL++S+G PI T+E+G + LQHG SY+L+ Sbjct: 307 PSTSDQLQVQADARIRVFINEMELEVSSGPFNVRDAFGEEVVLINSAGQPIVTDEYGVALHPLQHGASYYLI 378 HSP 3 Score: 21.557 bits (44), Expect = 2.298e-11 Identity = 8/11 (72.73%), Postives = 8/11 (72.73%), Query Frame = -3 Query: 281 CYAHQNHQICS 313 CYA NHQI S Sbjct: 263 CYATTNHQIAS 273
BLAST of CX078380 vs. ExPASy Swiss-Prot
Match: WOX7_ORYSJ (WUSCHEL-related homeobox 7 OS=Oryza sativa subsp. japonica GN=WOX7 PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 5.678e-18 Identity = 42/61 (68.85%), Postives = 50/61 (81.97%), Query Frame = -2 Query: 648 ERSTEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQN 830 ER +P + RW P+PEQI ILE+IFNSGMVNPP+DE RIR L+++G VGDANVFYWFQN Sbjct: 61 ERVPDP-KPRWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMQLQEYGQVGDANVFYWFQN 120
BLAST of CX078380 vs. ExPASy Swiss-Prot
Match: WOX12_ORYSJ (WUSCHEL-related homeobox 12 OS=Oryza sativa subsp. japonica GN=WOX12 PE=2 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 9.686e-18 Identity = 42/60 (70.00%), Postives = 49/60 (81.67%), Query Frame = -2 Query: 648 RSTEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQN 827 R+ EP + RW P+PEQI ILE IFNSGMVNPP+DE RIR L+++G VGDANVFYWFQN Sbjct: 65 RNPEP-KPRWNPRPEQIRILEGIFNSGMVNPPRDEIRRIRLQLQEYGQVGDANVFYWFQN 123 The following BLAST results are available for this feature:
BLAST of CX078380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CX078380 ID=CX078380; Name=CX078380; organism=Citrus sinensis; type=EST; length=846bpback to top |