CX078367
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX078367 vs. ExPASy Swiss-Prot
Match: ATPF_CITSI (ATP synthase subunit b, chloroplastic OS=Citrus sinensis GN=atpF PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.704e-26 Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 2 Query: 611 ILNSIRNSEELQRGAIERLEKARARLRKIEIEADQFRVNGYSEIEREKFNLINSTYKTLD 790 ILNSIRNSEELQRGAIERLEKARARLRKIEIEADQFRVNGYSEIEREKFNLINSTYKTLD Sbjct: 60 ILNSIRNSEELQRGAIERLEKARARLRKIEIEADQFRVNGYSEIEREKFNLINSTYKTLD 119
BLAST of CX078367 vs. ExPASy Swiss-Prot
Match: ATPF_POPTR (ATP synthase subunit b, chloroplastic OS=Populus trichocarpa GN=atpF PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.007e-22 Identity = 53/60 (88.33%), Postives = 58/60 (96.67%), Query Frame = 2 Query: 611 ILNSIRNSEELQRGAIERLEKARARLRKIEIEADQFRVNGYSEIEREKFNLINSTYKTLD 790 ILN+IRNSEEL+ GAIE+LEKARARLRK+EIEADQFRVNGYSEIEREK NLINSTYKTL+ Sbjct: 60 ILNTIRNSEELRGGAIEQLEKARARLRKVEIEADQFRVNGYSEIEREKLNLINSTYKTLE 119
BLAST of CX078367 vs. ExPASy Swiss-Prot
Match: ATPF_POPAL (ATP synthase subunit b, chloroplastic OS=Populus alba GN=atpF PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.007e-22 Identity = 53/60 (88.33%), Postives = 58/60 (96.67%), Query Frame = 2 Query: 611 ILNSIRNSEELQRGAIERLEKARARLRKIEIEADQFRVNGYSEIEREKFNLINSTYKTLD 790 ILN+IRNSEEL+ GAIE+LEKARARLRK+EIEADQFRVNGYSEIEREK NLINSTYKTL+ Sbjct: 60 ILNTIRNSEELRGGAIEQLEKARARLRKVEIEADQFRVNGYSEIEREKLNLINSTYKTLE 119
BLAST of CX078367 vs. ExPASy Swiss-Prot
Match: ATPF_LACSA (ATP synthase subunit b, chloroplastic OS=Lactuca sativa GN=atpF PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.470e-22 Identity = 52/60 (86.67%), Postives = 58/60 (96.67%), Query Frame = 2 Query: 611 ILNSIRNSEELQRGAIERLEKARARLRKIEIEADQFRVNGYSEIEREKFNLINSTYKTLD 790 ILN+IRNSEEL+ GAIE+LEKARARLRK+EIEADQFRVNGYSEIEREK NLI+STYKTL+ Sbjct: 60 ILNTIRNSEELREGAIEQLEKARARLRKVEIEADQFRVNGYSEIEREKLNLIDSTYKTLE 119
BLAST of CX078367 vs. ExPASy Swiss-Prot
Match: ATPF_HELAN (ATP synthase subunit b, chloroplastic OS=Helianthus annuus GN=atpF PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.625e-22 Identity = 52/60 (86.67%), Postives = 58/60 (96.67%), Query Frame = 2 Query: 611 ILNSIRNSEELQRGAIERLEKARARLRKIEIEADQFRVNGYSEIEREKFNLINSTYKTLD 790 ILN+IRNSEEL+ GAIE+LEKARARLRKIEIEAD+FRVNGYSEIEREK NLI+STYKTL+ Sbjct: 60 ILNTIRNSEELREGAIEQLEKARARLRKIEIEADEFRVNGYSEIEREKLNLIDSTYKTLE 119
BLAST of CX078367 vs. ExPASy Swiss-Prot
Match: ATPF_GOSHI (ATP synthase subunit b, chloroplastic OS=Gossypium hirsutum GN=atpF PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.625e-22 Identity = 52/60 (86.67%), Postives = 57/60 (95.00%), Query Frame = 2 Query: 611 ILNSIRNSEELQRGAIERLEKARARLRKIEIEADQFRVNGYSEIEREKFNLINSTYKTLD 790 ILN+IRNSEEL+ GAIERLEKARARLRK+E+EADQFRVNGYSEIEREK NLINSTYK L+ Sbjct: 60 ILNTIRNSEELRGGAIERLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTYKILE 119
BLAST of CX078367 vs. ExPASy Swiss-Prot
Match: ATPF_GOSBA (ATP synthase subunit b, chloroplastic OS=Gossypium barbadense GN=atpF PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.625e-22 Identity = 52/60 (86.67%), Postives = 57/60 (95.00%), Query Frame = 2 Query: 611 ILNSIRNSEELQRGAIERLEKARARLRKIEIEADQFRVNGYSEIEREKFNLINSTYKTLD 790 ILN+IRNSEEL+ GAIERLEKARARLRK+E+EADQFRVNGYSEIEREK NLINSTYK L+ Sbjct: 60 ILNTIRNSEELRGGAIERLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTYKILE 119
BLAST of CX078367 vs. ExPASy Swiss-Prot
Match: ATPF_GUIAB (ATP synthase subunit b, chloroplastic OS=Guizotia abyssinica GN=atpF PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.959e-22 Identity = 51/60 (85.00%), Postives = 58/60 (96.67%), Query Frame = 2 Query: 611 ILNSIRNSEELQRGAIERLEKARARLRKIEIEADQFRVNGYSEIEREKFNLINSTYKTLD 790 ILN+IRNSEEL+ GAIE+LEKARARLRK+EIEAD+FRVNGYSEIEREK NLI+STYKTL+ Sbjct: 60 ILNTIRNSEELREGAIEQLEKARARLRKVEIEADEFRVNGYSEIEREKLNLIDSTYKTLE 119
BLAST of CX078367 vs. ExPASy Swiss-Prot
Match: ATPF_VITVI (ATP synthase subunit b, chloroplastic OS=Vitis vinifera GN=atpF PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.219e-21 Identity = 50/60 (83.33%), Postives = 57/60 (95.00%), Query Frame = 2 Query: 611 ILNSIRNSEELQRGAIERLEKARARLRKIEIEADQFRVNGYSEIEREKFNLINSTYKTLD 790 ILN+IRNSEEL+ GAIE+LEKARARLRK+E+EADQ+RVNGYSEIEREK NLINSTY TL+ Sbjct: 60 ILNTIRNSEELREGAIEQLEKARARLRKVEMEADQYRVNGYSEIEREKLNLINSTYNTLE 119
BLAST of CX078367 vs. ExPASy Swiss-Prot
Match: ATPF_PANGI (ATP synthase subunit b, chloroplastic OS=Panax ginseng GN=atpF PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.219e-21 Identity = 51/60 (85.00%), Postives = 57/60 (95.00%), Query Frame = 2 Query: 611 ILNSIRNSEELQRGAIERLEKARARLRKIEIEADQFRVNGYSEIEREKFNLINSTYKTLD 790 ILN+IRNSEEL+ GAIE+LEKARARLRK+E+EADQFRVNGYSEIEREK+N INST KTLD Sbjct: 60 ILNTIRNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKWNFINSTSKTLD 119 The following BLAST results are available for this feature:
BLAST of CX078367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >CX078367 ID=CX078367; Name=CX078367; organism=Citrus sinensis; type=EST; length=792bpback to top |