CX078364

Overview
NameCX078364
Unique NameCX078364
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078364 vs. ExPASy Swiss-Prot
Match: SAP12_ARATH (Zinc finger AN1 domain-containing stress-associated protein 12 OS=Arabidopsis thaliana GN=SAP12 PE=2 SV=2)

HSP 1 Score: 225.713 bits (574), Expect = 2.611e-58
Identity = 102/176 (57.95%), Postives = 121/176 (68.75%), Query Frame = -3
Query:  228 GGGTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSVSIXXXXXXXXXXXTMLEKHKKSGDCDPRKQKKPSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKKDSLLGKNAAADAAVGKGRWNDKFLFALASRNGKECSK 755
            GGGTEAFPDLG HCQ  DC  LDFLPF CDGC  VFC EHRS+KSH CPKSD  SR V +CE CS++I           ++LEKH++SGDCDP K+KKP+CPVKRCKE LTF+N  TCK C +K CLKHRFP DH C K  +       + A    RWN++F+ AL+ RN K C +
Sbjct:    3 GGGTEAFPDLGEHCQDPDCKLLDFLPFTCDGCKLVFCLEHRSYKSHNCPKSDHGSRTVSICETCSIAIETTGFDEKGIKSLLEKHERSGDCDPNKKKKPTCPVKRCKEILTFANNLTCKYCGVKFCLKHRFPTDHVCNKKII-------NTAGTSSRWNERFMEALSLRNQKGCGR 171          
BLAST of CX078364 vs. ExPASy Swiss-Prot
Match: SAP17_ORYSJ (Zinc finger AN1 domain-containing stress-associated protein 17 OS=Oryza sativa subsp. japonica GN=SAP17 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.047e-43
Identity = 80/151 (52.98%), Postives = 99/151 (65.56%), Query Frame = -3
Query:  300 GTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSVSI-XXXXXXXXXXXTMLEKHKKSGDCDPRKQKKPSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKKDSLLGKNAAADAA 749
            GTEAFPDLG+ C  +DC+QLDFLPF CDGC K FC EHR+++ H C ++  + R V+VCE C  +I             +LE H +S  CDP +++KP CPV RCKE LTFSNT+ CK C  KVCLKHRFPADH+C        + AA AA
Sbjct:    5 GTEAFPDLGAQCDREDCNQLDFLPFDCDGCGKTFCAEHRTYRDHGCARAADQGRTVVVCEACGDAIERRAGDGGGDDAAVLEAHARSRRCDPARKRKPRCPVPRCKETLTFSNTSGCKGCGQKVCLKHRFPADHACAGAGAGAASKAAGAA 155          
BLAST of CX078364 vs. ExPASy Swiss-Prot
Match: SAP11_ARATH (Zinc finger AN1 and C2H2 domain-containing stress-associated protein 11 OS=Arabidopsis thaliana GN=SAP11 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 9.991e-34
Identity = 67/139 (48.20%), Postives = 82/139 (58.99%), Query Frame = -3
Query:  345 GTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSVSIXXXXXXXXXXXTMLEKHKKSGDCDP----RKQKKPSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSC 749
            GT  FPDLG HC    C Q+DFLPF CD C +VFC +HRS+  H CPK D +   V++C +C+  +              EKH  + DCDP    +  KK  CPV RCKE LTFSNT  C+ CN+  CLKHRF  DH+C
Sbjct:    2 GTPEFPDLGKHCSVDVCKQIDFLPFTCDRCLQVFCLDHRSYMKHSCPKGDREDVTVVICPLCAKGVRLNPNEDPNITW--EKHVNT-DCDPSNYEKATKKKKCPVPRCKEYLTFSNTIKCRDCNVDHCLKHRFGPDHTC 137          
BLAST of CX078364 vs. ExPASy Swiss-Prot
Match: SAP13_ARATH (Zinc finger AN1 and C2H2 domain-containing stress-associated protein 13 OS=Arabidopsis thaliana GN=SAP13 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.105e-32
Identity = 80/193 (41.45%), Postives = 104/193 (53.89%), Query Frame = -3
Query:  228 GTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSVSIXXXXXXXXXXXTMLEKHKKSGDCDP----RKQKKPSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSC---KKD----SLLG------KNAAADAAVGKGRWNDKFLFALA--SRNGKECSK 749
            GT  FPDLG HC    C Q+DFLPF CD C +V+C +HRS+  H+CPK +     V++C +C+  +              EKH  + DCDP    +  KK  CPV RC+E LTFSNT  C+ C++  CLKHRF  DHSC   KK     S +G      K A A ++    RW+  F  A A  SR G + S+
Sbjct:    2 GTPEFPDLGKHCSVDYCKQIDFLPFTCDRCLQVYCLDHRSYMKHDCPKGNRGDVTVVICPLCAKGVRLNPDEDPNITW--EKHVNT-DCDPSNYEKAVKKKKCPVPRCRELLTFSNTIKCRDCSIDHCLKHRFGPDHSCSGPKKPESSFSFMGFLSTNTKEAPASSS-SSSRWSSLFASAEASISRLGNDISQ 190          
BLAST of CX078364 vs. ExPASy Swiss-Prot
Match: SAP16_ORYSJ (Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 OS=Oryza sativa subsp. japonica GN=SAP16 PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 9.352e-32
Identity = 64/139 (46.04%), Postives = 81/139 (58.27%), Query Frame = -3
Query:  345 GTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSVSIXXXXXXXXXXXTMLEKHKKSGDCDP----RKQKKPSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSC 749
            GT  FP+LG HC   DC+Q+DFLPF CD C  VFC +HRS+ SH+CP ++ K   V++C +C+  +              + H  S DCDP    +  KK  CPV  C+E LTFSNT  CK C  + CLKHRF  DH C
Sbjct:    2 GTPEFPNLGKHCSVGDCNQIDFLPFTCDRCDHVFCLQHRSYTSHQCPNANQKDVTVLICPLCAKGVRLNPNEDPNITW--DTHVNS-DCDPSNYQKVTKKKKCPVPGCRETLTFSNTIRCKDCTKEHCLKHRFGPDHKC 137          
BLAST of CX078364 vs. ExPASy Swiss-Prot
Match: ZFN2A_PONAB (AN1-type zinc finger protein 2A OS=Pongo abelii GN=ZFAND2A PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.120e-19
Identity = 50/141 (35.46%), Postives = 69/141 (48.94%), Query Frame = -3
Query:  333 FPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSVSIXXXXXXXXXXXTMLEKHKKSGDCDPRKQKKPS------CPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKKDS 737
            FPDLG HC  + C QLDFLP KCD C + FC +H ++ +H+CP +  K   V VC +C+  I            ++       DCD    KK        C  + CK+K       +C  C+   C++HR P DHSC+  S
Sbjct:    3 FPDLGKHCSEKTCKQLDFLPVKCDACKQDFCKDHFTYAAHKCPFAFQKDVHVPVCPLCNTPI---PVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQ--MSCAQCHGNFCIQHRHPLDHSCRHGS 138          
BLAST of CX078364 vs. ExPASy Swiss-Prot
Match: ZFN2B_HUMAN (AN1-type zinc finger protein 2B OS=Homo sapiens GN=ZFAND2B PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.951e-19
Identity = 46/135 (34.07%), Postives = 67/135 (49.63%), Query Frame = -3
Query:  345 FPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSVSIXXXXXXXXXXXTMLEKHKKSGDCDPRKQKKP----SCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSC 737
            FPDLG+HC    C +LDFLP KCD C  +FC +H ++  H C  +  K  +V VC +C+V +            + E   +    DP +QK+      C    C+++       TC+ C+   C+KHR P DH C
Sbjct:    3 FPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHCGSAYQKDIQVPVCPLCNVPV-PVARGEPPDRAVGEHIDRDCRSDPAQQKRKIFTNKCERAGCRQREMMK--LTCERCSRNFCIKHRHPLDHDC 134          
BLAST of CX078364 vs. ExPASy Swiss-Prot
Match: ZFN2A_HUMAN (AN1-type zinc finger protein 2A OS=Homo sapiens GN=ZFAND2A PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 6.951e-19
Identity = 50/141 (35.46%), Postives = 67/141 (47.52%), Query Frame = -3
Query:  333 FPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSVSIXXXXXXXXXXXTMLEKHKKSGDCDPRKQKKPS------CPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKKDS 737
            FPDLG HC  + C QLDFLP KCD C + FC +H  + +H+CP +  K   V VC +C+  I            ++       DCD    KK        C  + CK+K        C  C+   C++HR P DHSC+  S
Sbjct:    3 FPDLGKHCSEKTCKQLDFLPVKCDACKQDFCKDHFPYAAHKCPFAFQKDVHVPVCPLCNTPI---PVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQ--MVCAQCHGNFCIQHRHPLDHSCRHGS 138          
BLAST of CX078364 vs. ExPASy Swiss-Prot
Match: ZFN2B_MOUSE (AN1-type zinc finger protein 2B OS=Mus musculus GN=Zfand2b PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.186e-18
Identity = 46/135 (34.07%), Postives = 65/135 (48.15%), Query Frame = -3
Query:  345 FPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSVSIXXXXXXXXXXXTMLEKHKKSGDCDPRKQKKP----SCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSC 737
            FPDLG+HC    C +LDFLP KCD C  +FC +H ++  H C  +  K  +V VC +C+V +            + E   +    DP +QK+      C    C+++       TC  C    C+KHR P DH C
Sbjct:    3 FPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHCGSAYQKDIQVPVCPLCNVPV-PVARGEPPDRAVGEHIDRDCRSDPAQQKRKIFTNKCERSGCRQREMMK--LTCDRCGRNFCIKHRHPLDHEC 134          
BLAST of CX078364 vs. ExPASy Swiss-Prot
Match: ZFN2B_RAT (AN1-type zinc finger protein 2B OS=Rattus norvegicus GN=Zfand2b PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.549e-18
Identity = 46/135 (34.07%), Postives = 65/135 (48.15%), Query Frame = -3
Query:  345 FPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSVSIXXXXXXXXXXXTMLEKHKKSGDCDPRKQKKP----SCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSC 737
            FPDLG+HC    C +LDFLP KCD C  +FC +H ++  H C  +  K  +V VC +C+V +            + E   +    DP +QK+      C    C+++       TC  C    C+KHR P DH C
Sbjct:    3 FPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAHHHCGSAYQKDIQVPVCPLCNVPV-PVARGEPPDRAVGEHIDRDCRSDPAQQKRKIFTNKCERSGCRQREMMK--LTCDRCGRNFCIKHRHPLDHDC 134          
The following BLAST results are available for this feature:
BLAST of CX078364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
SAP12_ARATH2.611e-5857.95Zinc finger AN1 domain-containing stress-associate... [more]
SAP17_ORYSJ4.047e-4352.98Zinc finger AN1 domain-containing stress-associate... [more]
SAP11_ARATH9.991e-3448.20Zinc finger AN1 and C2H2 domain-containing stress-... [more]
SAP13_ARATH1.105e-3241.45Zinc finger AN1 and C2H2 domain-containing stress-... [more]
SAP16_ORYSJ9.352e-3246.04Zinc finger AN1 and C2H2 domain-containing stress-... [more]
ZFN2A_PONAB3.120e-1935.46AN1-type zinc finger protein 2A OS=Pongo abelii GN... [more]
ZFN2B_HUMAN6.951e-1934.07AN1-type zinc finger protein 2B OS=Homo sapiens GN... [more]
ZFN2A_HUMAN6.951e-1935.46AN1-type zinc finger protein 2A OS=Homo sapiens GN... [more]
ZFN2B_MOUSE1.186e-1834.07AN1-type zinc finger protein 2B OS=Mus musculus GN... [more]
ZFN2B_RAT1.549e-1834.07AN1-type zinc finger protein 2B OS=Rattus norvegic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_8F05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-8F05-L10-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078364 ID=CX078364; Name=CX078364; organism=Citrus sinensis; type=EST; length=865bp
CTTTTTTTGCATTAATTTTAATTTTCTCATTGCTTGAATGTTAAATGGAA
TTTGTATTGAGAAATAACAAGTCACAGGTGAAATCATGTGTGGGCTTCCG
GAAGCCTTATAACATCATTAGCTTGAAGGTGAACAGAGTACATATAAACC
AAAACTAAATTCTGCACTGCTTTCTGGGTTCAATAAGCTTTAACAGAGGG
TGAACTGGAACTTGAACCTCGGTCACACTTGCTACATTCTTTCCCATTTC
TTGAAGCCAAAGCAAACAAAAACTTGTCATTCCATCTCCCCTTACCCACC
GCAGCATCAGCAGCAGCATTCTTTCCCAGTAATGAATCTTTCTTGCAGGA
ATGGTCAGCCGGAAACCGGTGCTTCAAACAAACCTTCAGATTGCAAGTCT
TGCATGTAGCAGTGTTGGAGAATGTCAGTTTCTCCTTGCAACGCTTAACA
GGGCAACTGGGTTTCTTCTGCTTTCTGGGATCGCAATCTCCAGACTTCTT
GTGCTTCTCTAGCATCGTCTTCTCGCCCTCTCCAAACTCTCCTGTTGTCT
CAATCGAAACCGAACATACTTCACAAACAATCACTTTCCTGCTCTTAATG
TCTGACTTCGGACATTCATGAGACTTGAATGACCGATGCTCGAAACAAAA
CACCTTGTGACAGCCGTCGCATTTGAAAGGGAGAAAATCGAGTTGATGGC
AATCTTGGTGTTGGCAATGGCTTCCTAAATCTGGGAAAGCTTCTGTTCCT
CCACCCATAATTGATATTTTATTTTCTTCTTGTTGATTTTGATTTCTTGT
GTTTTTTAAATTTTTGTTGAAATTGGCAGAATCAGCCAGCGTTGTTGTGG
TCATATAAAGAGTTC
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