EY702408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY702408 vs. ExPASy Swiss-Prot
Match: C3H12_ARATH (Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana GN=At1g32360 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.502e-32 Identity = 72/140 (51.43%), Postives = 90/140 (64.29%), Query Frame = 1 Query: 484 YSRDSSENVVHII-VGNGAPEHWIPNPNDSSVWATEDDY-------PDDPPSISNSNCQSQTRSNSEQPPNKKSRNGSQDVNFKSKAIGKMFFKTKLCCKFRNGTCPYITNCNFAHSIEELRRXXXXXXEXVAAHEEGRA 879 + RDS +VVH+I N P++W PN DS+VWATEDDY PD+ +N +TR + P+ S + + ++KAIGKMFFKTKLCCKFR GTCPYITNCNFAH++EELRR E VAAHEE R+ Sbjct: 4 HRRDSGGDVVHVIPTNNPPPDNWFPNLGDSAVWATEDDYNRAWAMNPDNTSGDNNGPPNKKTRGS----PSSSSATTTSAASNRTKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHTVEELRRPPPNWQEIVAAHEEERS 139
BLAST of EY702408 vs. ExPASy Swiss-Prot
Match: C3H56_ORYSJ (Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica GN=Os08g0159800 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.241e-27 Identity = 67/130 (51.54%), Postives = 77/130 (59.23%), Query Frame = 1 Query: 505 NVVHIIVGNGAPEHWI---PNPNDSSVWATEDDYPDDPPSISNSNCQSQTRSNSEQPP-NKKSRNGSQDVN----FKSKAIGKMFFKTKLCCKFRNGTCPYITNCNFAHSIEELRRXXXXXXEXVAAHEE 870 N +HII P+ W D+ +WATEDDY + S R+ SEQPP KKSR G KS+AIGKMFFKTKLCCKFR GTCPY+TNCNFAH +EELR+ E VAAHEE Sbjct: 5 NAIHIIPDAAGPDAWANAAAQGGDAGIWATEDDYNSQWNADGGGGGSS--RAGSEQPPPGKKSRGGGGGEGGGNTSKSRAIGKMFFKTKLCCKFRAGTCPYVTNCNFAHGMEELRKPPPNWQEIVAAHEE 132
BLAST of EY702408 vs. ExPASy Swiss-Prot
Match: C3H28_ARATH (Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana GN=At2g35430 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.248e-19 Identity = 56/118 (47.46%), Postives = 70/118 (59.32%), Query Frame = 1 Query: 478 MSYSRDSSENVVHI-IVGNGAPEHWIPNPNDSSVWATEDDYPDDPPSISNSNCQSQTRSNSEQPPNKKSRNGSQDVNFKSKAIGKMFFKTKLCCKFRNGTCPY-ITNCNFAHSIEELR 825 MS+ RD + VH+ I + PE+ PN DSSVWATEDDY + S+ + P+KK+R+ S S IGK FFKTKLC KFR GTCPY ++C+FAHS EELR Sbjct: 1 MSHRRDYGSDAVHVRITHDPPPENCFPNSGDSSVWATEDDY----------SRVWAINSDGAESPSKKTRSSS------SSEIGKSFFKTKLCFKFRAGTCPYSASSCHFAHSAEELR 102 The following BLAST results are available for this feature:
BLAST of EY702408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY702408 ID=EY702408; Name=EY702408; organism=Citrus sinensis; type=EST; length=884bpback to top |