CX078278
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI1_ARATH (DNA ligase 1 OS=Arabidopsis thaliana GN=At1g08130 PE=2 SV=2) HSP 1 Score: 315.079 bits (806), Expect = 2.940e-85 Identity = 148/185 (80.00%), Postives = 170/185 (91.89%), Query Frame = -2 Query: 249 DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLIRVREDKTPEQASSSEQVAEMYTAQKLNHPNNQDDNEDD 803 DATYEP+KRS NWLKLKKDY++SIGDS+DLVPIAAFHGRGKRTGVYGAFLLACYD + EEFQSICKIGTGFS+AML+ERSSSLRS+VI P+ YYR D+++PDVWFEPTEVWEVKAADLTISPVHRAA G+VDPDKGISLRFPRL+RVREDK PE+A+SSEQ+A++Y AQK NHP+N+ +DD Sbjct: 606 DATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPIAAFHGRGKRTGVYGAFLLACYDVDKEEFQSICKIGTGFSDAMLDERSSSLRSQVIATPKQYYRVGDSLNPDVWFEPTEVWEVKAADLTISPVHRAATGIVDPDKGISLRFPRLLRVREDKKPEEATSSEQIADLYQAQKHNHPSNEVKGDDD 790
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI1_DICDI (DNA ligase 1 OS=Dictyostelium discoideum GN=lig1 PE=3 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 9.834e-65 Identity = 112/182 (61.54%), Postives = 149/182 (81.87%), Query Frame = -2 Query: 249 YEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLIRVREDKTPEQASSSEQVAEMYTAQKLNHPNNQDDNEDD 794 YEPS+RS NWLK+KKDY++ + DSLDLVPI A++G+GKRTG YGA+LLACYD NNEEFQ++CKIGTGFS+ L +S L+ +I +PR +RF+D+I PDVWF P+ VWEV AADL+ISPVH AA G++DP+KGI+LRFPR IR+R DK+PE A+SS+QV +MY QK+N +++ + +D+ Sbjct: 1009 YEPSRRSYNWLKIKKDYMQGMTDSLDLVPIGAWYGKGKRTGTYGAYLLACYDENNEEFQTLCKIGTGFSDEQLTTFTSQLKPHLINQPRNQFRFSDSIKPDVWFSPSCVWEVLAADLSISPVHTAASGILDPNKGIALRFPRFIRIRPDKSPEDATSSDQVVDMYQNQKINSQSSKINEKDE 1190
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI1_XENLA (DNA ligase 1 OS=Xenopus laevis GN=lig1 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 2.122e-59 Identity = 106/187 (56.68%), Postives = 146/187 (78.07%), Query Frame = -2 Query: 249 RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLIRVREDKTPEQASSSEQVAEMY-TAQKLNHPNNQDDNEDD 806 +DATYE +KRS NWLKLKKDY+E +GD+LDLV I A+ G+GKRTG+YG FLLA YD +EE+Q+ICKIGTGF++ LE+ + L+ VI PR YYR+ PD WF+P +VWEVK ADL+ISPVH+AA+G+V+ KGISLRFPR +R+R+DK PE++++S QVA++Y Q++ + ++ + E+D Sbjct: 882 QDATYEIAKRSHNWLKLKKDYLEGVGDTLDLVVIGAYLGKGKRTGIYGGFLLASYDEESEEYQTICKIGTGFTDDDLEKHYNFLKDHVIENPRSYYRWDSATEPDHWFDPVQVWEVKCADLSISPVHKAALGLVEDQKGISLRFPRFLRIRDDKKPEESTNSFQVADLYRKQQQIQNTSSTEKAEED 1068
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI1_HUMAN (DNA ligase 1 OS=Homo sapiens GN=LIG1 PE=1 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 3.620e-59 Identity = 110/185 (59.46%), Postives = 139/185 (75.14%), Query Frame = -2 Query: 252 DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLIRVREDKTPEQASSSEQVAEMYTAQ-KLNHPNNQDDNED 803 DATYE +KRS NWLKLKKDY++ +GD+LDLV I A+ GRGKR G YG FLLA YD ++EE Q+ICK+GTGFS+ LEE SL++ V+P PRPY R + PD W +P+ VWEVK ADL++SP++ AA G+VD DKGISLRFPR IRVREDK PEQA++S QVA +Y Q ++ + +D D Sbjct: 730 DATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSLKALVLPSPRPYVRIDGAVIPDHWLDPSAVWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSD 914
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI1_DROME (DNA ligase 1 OS=Drosophila melanogaster GN=CG5602 PE=1 SV=2) HSP 1 Score: 226.868 bits (577), Expect = 1.053e-58 Identity = 103/171 (60.23%), Postives = 132/171 (77.19%), Query Frame = -2 Query: 291 DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLIRVREDKTPEQASSSEQVAEMYTAQ 803 +ATYE +KRS NWLKLKKDY+ ++GDSLDLV I + G+G+RTG YG FLLACYD+ NEE+QSICKIGTGF++ L+ S L V + YYR+ ++ PD WFEP +VWEVK ADL++SP+HRAAIG+VD ++GISLRFPR IR+R+DK E A+ + QVA MY +Q Sbjct: 557 EATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRTGTYGGFLLACYDTENEEYQSICKIGTGFTDEDLQTHSEFLGKHVTSAAKSYYRYDPSLEPDHWFEPVQVWEVKCADLSLSPIHRAAIGIVDGERGISLRFPRFIRIRDDKNSENATDANQVAHMYQSQ 727
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI1_RAT (DNA ligase 1 OS=Rattus norvegicus GN=Lig1 PE=2 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.375e-58 Identity = 107/185 (57.84%), Postives = 137/185 (74.05%), Query Frame = -2 Query: 249 DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLIRVREDKTPEQASSSEQVAEMYTAQKLNHPNNQDDNEDD 803 DATYE +KRS NWLKLKKDY+E +GD+LDLV I A+ GRGKR G YG FLLA YD +EE +ICK+GTGFS+ LEE ++++ ++P PRPY R ++P+ W +P+ VWEVK ADLT+SP++RAA G+VD +KGISLRFPR IRVREDK PEQA++S+QVA +Y Q D + D Sbjct: 730 DATYEIAKRSHNWLKLKKDYLEGVGDTLDLVVIGAYLGRGKRPGRYGGFLLAAYDEESEELAAICKLGTGFSDEELEEHHQNMQALLLPTPRPYVRIDGAVAPNHWLDPSIVWEVKCADLTLSPIYRAARGMVDKEKGISLRFPRFIRVREDKQPEQATTSDQVASLYRKQSQIQNQQSSDLDSD 914
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI1_MOUSE (DNA ligase 1 OS=Mus musculus GN=Lig1 PE=1 SV=2) HSP 1 Score: 226.483 bits (576), Expect = 1.375e-58 Identity = 108/185 (58.38%), Postives = 136/185 (73.51%), Query Frame = -2 Query: 249 DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLIRVREDKTPEQASSSEQVAEMYTAQKLNHPNNQDDNEDD 803 DATYE +KRS NWLKLKKDY++ +GD+LDLV I A+ GRGKR G YG FLLA YD +EE Q+ICK+GTGFS+ LEE SL++ V+P PRPY R ++PD W +P+ VWEVK ADL++SP++ AA G+VD +KGISLRFPR IRVR+DK PEQA++S QVA +Y Q D + D Sbjct: 728 DATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLAAYDEESEELQAICKLGTGFSDEELEEHHQSLQALVLPTPRPYVRIDGAVAPDHWLDPSIVWEVKCADLSLSPIYPAARGLVDKEKGISLRFPRFIRVRKDKQPEQATTSNQVASLYRKQSQIQNQQSSDLDSD 912
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI1_SCHPO (DNA ligase 1 OS=Schizosaccharomyces pombe GN=cdc17 PE=2 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.090e-55 Identity = 105/173 (60.69%), Postives = 133/173 (76.88%), Query Frame = -2 Query: 291 DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTIS--PDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLIRVREDKTPEQASSSEQVAEMYTAQ 803 D+ YEPSKRS +WLK+KKDY+ +GDSLDL+ I A++G+GKRT VYGAFLL CYD + E QSICK+GTGFSE LE + L+ VI K + +Y +D + PDVWFEP +WEV AADL++SPV++AAIG V DKGISLRFPR IR+REDK+ E A++SEQV+E Y +Q Sbjct: 579 DSHYEPSKRSRHWLKVKKDYLSGVGDSLDLIVIGAYYGKGKRTSVYGAFLLGCYDPDTETVQSICKLGTGFSEEHLETFYNQLKDIVISKKKDFYAHSDVPAHQPDVWFEPKYLWEVLAADLSLSPVYKAAIGYVQEDKGISLRFPRFIRIREDKSWEDATTSEQVSEFYRSQ 751
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI1_CAEEL (DNA ligase 1 OS=Caenorhabditis elegans GN=lig-1 PE=2 SV=2) HSP 1 Score: 201.83 bits (512), Expect = 3.628e-51 Identity = 96/172 (55.81%), Postives = 127/172 (73.84%), Query Frame = -2 Query: 288 DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLIRVREDKTPEQASSSEQVAEMYTAQK 803 +ATYE S+RS +WLK+KKDY++ +GD+LDLV + A+ G GKRTGVYG +LL CY+ EE++S+CKIGTGF++ L E+ L+ K I K YY+F T+ PD F P V+EVK AD+TISP H+AA G+ D KGISLRFPR +R+R+DK + A+SSEQV EMY Q+ Sbjct: 449 EATYEISRRSHSWLKMKKDYVDGVGDTLDLVVMGAYSGVGKRTGVYGGYLLGCYNPTTEEYESVCKIGTGFTDEDLAEQYKILQDKKIDKSPSYYQFDHTLKPDDTFSPYLVFEVKCADITISPRHKAASGLTDDGKGISLRFPRFLRIRDDKNSDDATSSEQVLEMYKNQE 620
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI1_YEAST (DNA ligase 1 OS=Saccharomyces cerevisiae GN=CDC9 PE=1 SV=2) HSP 1 Score: 197.978 bits (502), Expect = 5.239e-50 Identity = 93/171 (54.39%), Postives = 124/171 (72.51%), Query Frame = -2 Query: 291 DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLIRVREDKTPEQASSSEQVAEMYTAQ 803 ++ YEPSKRS NWLKLKKDY+E +GDSLDL + A++GRGKRTG YG FLL CY+ + EF++ CKIGTGFS+ ML+ L +I P+ + F + PDVWFEPT ++EV ADL++SP+++A G DKG+SLRFPR +R+REDK E A+SS+Q+ E+Y Q Sbjct: 582 ESHYEPSKRSRNWLKLKKDYLEGVGDSLDLCVLGAYYGRGKRTGTYGGFLLGCYNQDTGEFETCCKIGTGFSDEMLQLLHDRLTPTIIDGPKATFVFDSSAEPDVWFEPTTLFEVLTADLSLSPIYKA--GSATFDKGVSLRFPRFLRIREDKGVEDATSSDQIVELYENQ 750 The following BLAST results are available for this feature:
BLAST of CX078278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
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Sequences
The
following sequences are available for this feature:
EST sequence >CX078278 ID=CX078278; Name=CX078278; organism=Citrus sinensis; type=EST; length=807bpback to top |