CX078277
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX078277 vs. ExPASy Swiss-Prot
Match: P4HA1_RAT (Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1 PE=2 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 1.056e-26 Identity = 69/203 (33.99%), Postives = 99/203 (48.77%), Query Frame = 1 Query: 175 EPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXXADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDAALDPSSLHGGCPVIKGNKWSSTKWI 771 +PR +H+ +S E E + +LA P + ++TV D +TGK ++ R S +L+ D T L + E LQV +Y G +YEPHFD+ D F G R+AT L Y+SDV GG TVFP + G S+ PK G A+ ++++ D S+ H CPV+ GNKW S KW+ Sbjct: 334 KPRIIRFHDIISDAEIEIVKDLAKPRLSRATVHDPETGKLTTAQYRVSKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWLFYMSDVSAGGATVFP-------------------EVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWL 517
BLAST of CX078277 vs. ExPASy Swiss-Prot
Match: P4HA1_CHICK (Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.801e-26 Identity = 70/203 (34.48%), Postives = 98/203 (48.28%), Query Frame = 1 Query: 175 EPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXXADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDAALDPSSLHGGCPVIKGNKWSSTKWI 771 +PR + + +S EE E + LA P + ++TV D +TGK + R S +L+ D T L + E LQV +Y G +YEPHFD+ D F G R+AT L Y+SDV GG TVFP + G S+ PK G A+ ++++ P D S+ H CPV+ GNKW S KW+ Sbjct: 316 KPRIVRFLDIISDEEIETVKELAKPRLSRATVHDPETGKLTTAHYRVSKSAWLSGYESPVVSRINTRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFGRKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFP-------------------EVGASVWPKKGTAVFWYNLFPSGEGDYSTRHAACPVLVGNKWVSNKWL 499
BLAST of CX078277 vs. ExPASy Swiss-Prot
Match: P4HA2_CAEEL (Prolyl 4-hydroxylase subunit alpha-2 OS=Caenorhabditis elegans GN=phy-2 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.241e-26 Identity = 71/209 (33.97%), Postives = 103/209 (49.28%), Query Frame = 1 Query: 157 VEVISWEPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXXADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFMDE----FNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDAALDPSSLHGGCPVIKGNKWSSTKWI 771 VE++ ++P A ++ N + E E + LA+P ++++TV +S TG+ + + R S +L DFT L E LQV +Y G Y+PHFD+ E F T N G R+ATVL Y+S E GG TVF N L G ++ P DAL +++++ D D + H CPV+ G KW S KWI Sbjct: 318 VEILRFDPLAVLFKNVIHDSEIEVIKELASPKLKRATVQNSKTGELEHATYRISKSAWLKGDLDPVIDRVNRRIEDFTNLNQATSEELQVANYGLGGHYDPHFDFARKEEKNAFKTLNTGNRIATVLFYMSQPERGGATVF-------------NHL------GTAVFPSKNDALFWYNLRRDGEGDLRTRHAACPVLLGVKWVSNKWI 507
BLAST of CX078277 vs. ExPASy Swiss-Prot
Match: P4HA1_PONAB (Prolyl 4-hydroxylase subunit alpha-1 OS=Pongo abelii GN=P4HA1 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.397e-25 Identity = 67/203 (33.00%), Postives = 97/203 (47.78%), Query Frame = 1 Query: 175 EPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXXADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDAALDPSSLHGGCPVIKGNKWSSTKWI 771 +PR +H+ +S E E + +LA P +R++T+ + TG + R S +L+ D T L + E LQV +Y G +YEPHFD+ D F G R+AT L Y+SDV GG TVFP + G S+ PK G A+ ++++ D S+ H CPV+ GNKW S KW+ Sbjct: 334 KPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFP-------------------EVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWL 517
BLAST of CX078277 vs. ExPASy Swiss-Prot
Match: P4HA1_MOUSE (Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus GN=P4ha1 PE=2 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 3.397e-25 Identity = 67/203 (33.00%), Postives = 97/203 (47.78%), Query Frame = 1 Query: 175 EPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXXADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDAALDPSSLHGGCPVIKGNKWSSTKWI 771 +PR +H+ +S E E + +LA P +R++T+ + TG + R S +L+ D T L + E LQV +Y G +YEPHFD+ D F G R+AT L Y+SDV GG TVFP + G S+ PK G A+ ++++ D S+ H CPV+ GNKW S KW+ Sbjct: 334 KPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPVTGALETVHYRISKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWLFYMSDVSAGGATVFP-------------------EVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWL 517
BLAST of CX078277 vs. ExPASy Swiss-Prot
Match: P4HA1_HUMAN (Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapiens GN=P4HA1 PE=1 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 3.397e-25 Identity = 67/203 (33.00%), Postives = 97/203 (47.78%), Query Frame = 1 Query: 175 EPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXXADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDAALDPSSLHGGCPVIKGNKWSSTKWI 771 +PR +H+ +S E E + +LA P +R++T+ + TG + R S +L+ D T L + E LQV +Y G +YEPHFD+ D F G R+AT L Y+SDV GG TVFP + G S+ PK G A+ ++++ D S+ H CPV+ GNKW S KW+ Sbjct: 334 KPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFP-------------------EVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWL 517
BLAST of CX078277 vs. ExPASy Swiss-Prot
Match: P4HA1_BOVIN (Prolyl 4-hydroxylase subunit alpha-1 OS=Bos taurus GN=P4HA1 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.568e-25 Identity = 67/203 (33.00%), Postives = 97/203 (47.78%), Query Frame = 1 Query: 175 EPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXXADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDAALDPSSLHGGCPVIKGNKWSSTKWI 771 +PR +H+ +S E E + +LA P +R++T+ + TG + R S +L+ D T L + E LQV +Y G +YEPHFD+ D F G R+AT L Y+SDV GG TVFP + G S+ PK G A+ ++++ D S+ H CPV+ GNKW S KW+ Sbjct: 334 KPRIIRFHDIISDAEIEVVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVLAGGATVFP-------------------EVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWL 517
BLAST of CX078277 vs. ExPASy Swiss-Prot
Match: P4HA2_CHICK (Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gallus GN=P4HA2 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.208e-22 Identity = 70/210 (33.33%), Postives = 101/210 (48.10%), Query Frame = 1 Query: 172 WE-PRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXXADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNT--KNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDAALDPSSLHGGCPVIKGNKWSSTKWI--RVNEY 786 W+ P Y++ +S EE E + LA P + ++TV D TG + R S ++L T L ++ E LQV +Y G +YEPHFD+ F++ K+ G R+AT L Y+SDVE GG TVFP+ G +I PK G A+ ++++ D + H CPV+ G KW S KW R NE+ Sbjct: 334 WDSPHIVRYYDVMSDEEIEKIKQLAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVAKVNQRMQQITGLTVKTAELLQVANYGMGGQYEPHFDFSRRPFDSTLKSEGNRLATFLNYMSDVEAGGATVFPDF-------------------GAAIWPKKGTAVFWYNLFRSGEGDYRTRHAACPVLVGCKWVSNKWFHERGNEF 524
BLAST of CX078277 vs. ExPASy Swiss-Prot
Match: P4HA1_CAEEL (Prolyl 4-hydroxylase subunit alpha-1 OS=Caenorhabditis elegans GN=dpy-18 PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 7.832e-22 Identity = 67/217 (30.88%), Postives = 100/217 (46.08%), Query Frame = 1 Query: 157 VEVISWEPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXXADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFMDE----FNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDAALDPSSLHGGCPVIKGNKWSSTKWI--RVNEYK 789 VE+ + P A ++ + +S +E + LA P + ++TV DS TGK + R S +L T L +E E LQ+ +Y G Y+PHFD+ E F + G R+ATVL Y+S GG TVF A+ +I P DAL ++++ +P + H CPV+ G KW S KWI + NE++ Sbjct: 321 VEIKRFNPLAVLFKDVISDDEVAAIQELAKPKLARATVHDSVTGKLVTATYRISKSAWLKEWEGDVVETVNKRIGYMTNLEMETAEELQIANYGIGGHYDPHFDHAKKEESKSFESLGTGNRIATVLFYMSQPSHGGGTVFTEAKS-------------------TILPTKNDALFWYNLYKQGDGNPDTRHAACPVLVGIKWVSNKWIHEKGNEFR 518
BLAST of CX078277 vs. ExPASy Swiss-Prot
Match: P4HA2_MOUSE (Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus GN=P4ha2 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.745e-21 Identity = 66/204 (32.35%), Postives = 94/204 (46.08%), Query Frame = 1 Query: 172 WE-PRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXXADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDAALDPSSLHGGCPVIKGNKWSSTKW 768 W+ P Y++ +S EE E + +A P + ++TV D TG + R S ++L T L ++ E LQV +Y G +YEPHFD+ D F G R+AT L Y+SDVE GG TVFP+ G +I PK G A+ ++++ D + H CPV+ G KW S KW Sbjct: 335 WDSPHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPHFDFSRSDDEDAFKRLGTGNRVATFLNYMSDVEAGGATVFPDL-------------------GAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKWVSNKW 519 The following BLAST results are available for this feature:
BLAST of CX078277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX078277 ID=CX078277; Name=CX078277; organism=Citrus sinensis; type=EST; length=803bpback to top |