CX078276
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX078276 vs. ExPASy Swiss-Prot
Match: P4HA1_CHICK (Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.294e-22 Identity = 62/177 (35.03%), Postives = 85/177 (48.02%), Query Frame = -2 Query: 357 MRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXIADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDAALDPSSLHGGCPVIKGNKWSSTKWI 875 + ++TV D +TGK + R S +L+ I D T L + E LQV +Y G +YEPHFD+ D F G R+AT L Y+SDV GG TVFP + G S+ PK G A+ ++++ P D S+ H CPV+ GNKW S KW+ Sbjct: 342 LSRATVHDPETGKLTTAHYRVSKSAWLSGYESPVVSRINTRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFGRKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFP-------------------EVGASVWPKKGTAVFWYNLFPSGEGDYSTRHAACPVLVGNKWVSNKWL 499
BLAST of CX078276 vs. ExPASy Swiss-Prot
Match: P4HA1_RAT (Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1 PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 2.627e-21 Identity = 61/177 (34.46%), Postives = 85/177 (48.02%), Query Frame = -2 Query: 357 MRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXIADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDAALDPSSLHGGCPVIKGNKWSSTKWI 875 + ++TV D +TGK ++ R S +L+ I D T L + E LQV +Y G +YEPHFD+ D F G R+AT L Y+SDV GG TVFP + G S+ PK G A+ ++++ D S+ H CPV+ GNKW S KW+ Sbjct: 360 LSRATVHDPETGKLTTAQYRVSKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWLFYMSDVSAGGATVFP-------------------EVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWL 517
BLAST of CX078276 vs. ExPASy Swiss-Prot
Match: P4HA1_PONAB (Prolyl 4-hydroxylase subunit alpha-1 OS=Pongo abelii GN=P4HA1 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.452e-20 Identity = 59/177 (33.33%), Postives = 83/177 (46.89%), Query Frame = -2 Query: 357 MRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXIADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDAALDPSSLHGGCPVIKGNKWSSTKWI 875 +R++T+ + TG + R S +L+ I D T L + E LQV +Y G +YEPHFD+ D F G R+AT L Y+SDV GG TVFP + G S+ PK G A+ ++++ D S+ H CPV+ GNKW S KW+ Sbjct: 360 LRRATISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFP-------------------EVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWL 517
BLAST of CX078276 vs. ExPASy Swiss-Prot
Match: P4HA1_MOUSE (Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus GN=P4ha1 PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 8.452e-20 Identity = 59/177 (33.33%), Postives = 83/177 (46.89%), Query Frame = -2 Query: 357 MRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXIADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDAALDPSSLHGGCPVIKGNKWSSTKWI 875 +R++T+ + TG + R S +L+ I D T L + E LQV +Y G +YEPHFD+ D F G R+AT L Y+SDV GG TVFP + G S+ PK G A+ ++++ D S+ H CPV+ GNKW S KW+ Sbjct: 360 LRRATISNPVTGALETVHYRISKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWLFYMSDVSAGGATVFP-------------------EVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWL 517
BLAST of CX078276 vs. ExPASy Swiss-Prot
Match: P4HA1_HUMAN (Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapiens GN=P4HA1 PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 8.452e-20 Identity = 59/177 (33.33%), Postives = 83/177 (46.89%), Query Frame = -2 Query: 357 MRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXIADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDAALDPSSLHGGCPVIKGNKWSSTKWI 875 +R++T+ + TG + R S +L+ I D T L + E LQV +Y G +YEPHFD+ D F G R+AT L Y+SDV GG TVFP + G S+ PK G A+ ++++ D S+ H CPV+ GNKW S KW+ Sbjct: 360 LRRATISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFP-------------------EVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWL 517
BLAST of CX078276 vs. ExPASy Swiss-Prot
Match: P4HA2_CAEEL (Prolyl 4-hydroxylase subunit alpha-2 OS=Caenorhabditis elegans GN=phy-2 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.104e-19 Identity = 62/177 (35.03%), Postives = 85/177 (48.02%), Query Frame = -2 Query: 357 MRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXIADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFMDE----FNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDAALDPSSLHGGCPVIKGNKWSSTKWI 875 ++++TV +S TG+ + + R S +L I DFT L E LQV +Y G Y+PHFD+ E F T N G R+ATVL Y+S E GG TVF N L G ++ P DAL +++++ D D + H CPV+ G KW S KWI Sbjct: 350 LKRATVQNSKTGELEHATYRISKSAWLKGDLDPVIDRVNRRIEDFTNLNQATSEELQVANYGLGGHYDPHFDFARKEEKNAFKTLNTGNRIATVLFYMSQPERGGATVF-------------NHL------GTAVFPSKNDALFWYNLRRDGEGDLRTRHAACPVLLGVKWVSNKWI 507
BLAST of CX078276 vs. ExPASy Swiss-Prot
Match: P4HA1_BOVIN (Prolyl 4-hydroxylase subunit alpha-1 OS=Bos taurus GN=P4HA1 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.883e-19 Identity = 59/177 (33.33%), Postives = 83/177 (46.89%), Query Frame = -2 Query: 357 MRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXIADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDAALDPSSLHGGCPVIKGNKWSSTKWI 875 +R++T+ + TG + R S +L+ I D T L + E LQV +Y G +YEPHFD+ D F G R+AT L Y+SDV GG TVFP + G S+ PK G A+ ++++ D S+ H CPV+ GNKW S KW+ Sbjct: 360 LRRATISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVLAGGATVFP-------------------EVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWL 517
BLAST of CX078276 vs. ExPASy Swiss-Prot
Match: P4HA2_CHICK (Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gallus GN=P4HA2 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.911e-18 Identity = 60/182 (32.97%), Postives = 87/182 (47.80%), Query Frame = -2 Query: 342 MRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXIADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNT--KNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDAALDPSSLHGGCPVIKGNKWSSTKWI--RVNEY 875 + ++TV D TG + R S ++L + T L ++ E LQV +Y G +YEPHFD+ F++ K+ G R+AT L Y+SDVE GG TVFP+ G +I PK G A+ ++++ D + H CPV+ G KW S KW R NE+ Sbjct: 362 LARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVAKVNQRMQQITGLTVKTAELLQVANYGMGGQYEPHFDFSRRPFDSTLKSEGNRLATFLNYMSDVEAGGATVFPDF-------------------GAAIWPKKGTAVFWYNLFRSGEGDYRTRHAACPVLVGCKWVSNKWFHERGNEF 524
BLAST of CX078276 vs. ExPASy Swiss-Prot
Match: P4HA1_CAEEL (Prolyl 4-hydroxylase subunit alpha-1 OS=Caenorhabditis elegans GN=dpy-18 PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.926e-17 Identity = 59/185 (31.89%), Postives = 84/185 (45.41%), Query Frame = -2 Query: 339 MRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXIADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFMDE----FNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDAALDPSSLHGGCPVIKGNKWSSTKWI--RVNEYK 875 + ++TV DS TGK + R S +L I T L +E E LQ+ +Y G Y+PHFD+ E F + G R+ATVL Y+S GG TVF A+ +I P DAL ++++ +P + H CPV+ G KW S KWI + NE++ Sbjct: 353 LARATVHDSVTGKLVTATYRISKSAWLKEWEGDVVETVNKRIGYMTNLEMETAEELQIANYGIGGHYDPHFDHAKKEESKSFESLGTGNRIATVLFYMSQPSHGGGTVFTEAKS-------------------TILPTKNDALFWYNLYKQGDGNPDTRHAACPVLVGIKWVSNKWIHEKGNEFR 518
BLAST of CX078276 vs. ExPASy Swiss-Prot
Match: P4HA2_MOUSE (Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus GN=P4ha2 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.697e-17 Identity = 57/176 (32.39%), Postives = 80/176 (45.45%), Query Frame = -2 Query: 360 MRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXIADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDAALDPSSLHGGCPVIKGNKWSSTKW 875 + ++TV D TG + R S ++L + T L ++ E LQV +Y G +YEPHFD+ D F G R+AT L Y+SDVE GG TVFP+ G +I PK G A+ ++++ D + H CPV+ G KW S KW Sbjct: 363 LARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPHFDFSRSDDEDAFKRLGTGNRVATFLNYMSDVEAGGATVFPDL-------------------GAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKWVSNKW 519 The following BLAST results are available for this feature:
BLAST of CX078276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX078276 ID=CX078276; Name=CX078276; organism=Citrus sinensis; type=EST; length=879bpback to top |