CX078269
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX078269 vs. ExPASy Swiss-Prot
Match: NU1C_CITSI (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Citrus sinensis GN=ndhA PE=3 SV=1) HSP 1 Score: 320.857 bits (821), Expect = 5.499e-87 Identity = 167/168 (99.40%), Postives = 168/168 (100.00%), Query Frame = -1 Query: 300 IESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYSVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 803 +ESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYSVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL Sbjct: 17 LESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYSVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 184
BLAST of CX078269 vs. ExPASy Swiss-Prot
Match: NU1C_COFAR (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Coffea arabica GN=ndhA PE=3 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 3.231e-79 Identity = 151/170 (88.82%), Postives = 159/170 (93.53%), Query Frame = -1 Query: 300 FPIESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYSVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 809 F +ESL+EVYGI+W+L PI VL ITIGVLVIVWLEREISAGIQQRIGPEYA PLGILQALADGTKLLFKENLLPSRG++ LFSIGPSIAVI+ILLSYSVIPF Y LVLADL IG+FLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL Sbjct: 15 FKLESLKEVYGIIWILIPIFTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKENLLPSRGDARLFSIGPSIAVISILLSYSVIPFGYRLVLADLTIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 184
BLAST of CX078269 vs. ExPASy Swiss-Prot
Match: NU1C_LACSA (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Lactuca sativa GN=ndhA PE=3 SV=1) HSP 1 Score: 291.967 bits (746), Expect = 2.735e-78 Identity = 149/168 (88.69%), Postives = 160/168 (95.24%), Query Frame = -1 Query: 300 IESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYSVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 803 +ESL+EVYGI+W+L PI VL ITIGVLVIVWLEREISAGIQQRIGPEYA PLGILQALADGTKLLFKENLLPSRG++ LFSIGPSIAVI+ILLSY VIPFSY+LVLADL+IG+FLWIAISSIAP+GLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL Sbjct: 17 LESLKEVYGIIWMLIPIFTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYLVIPFSYHLVLADLSIGVFLWIAISSIAPVGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 184
BLAST of CX078269 vs. ExPASy Swiss-Prot
Match: NU1C_GOSHI (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Gossypium hirsutum GN=ndhA PE=3 SV=1) HSP 1 Score: 291.967 bits (746), Expect = 2.735e-78 Identity = 148/170 (87.06%), Postives = 160/170 (94.12%), Query Frame = -1 Query: 300 FPIESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYSVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 809 + +ESL+EVYGI+W+L PI VL ITIGVLVIVWLEREISAGIQQRIGPEYA PLGILQALADGTKLLFKEN+LPSRGN+ LFSIGP+IAVI+ILLS+SVIPFS L+LADLNIGIFLWIAISSIAP+GLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL Sbjct: 15 YTLESLKEVYGIIWMLVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKENILPSRGNTRLFSIGPAIAVISILLSFSVIPFSSRLILADLNIGIFLWIAISSIAPVGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 184
BLAST of CX078269 vs. ExPASy Swiss-Prot
Match: NU1C_PELHO (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Pelargonium hortorum GN=ndhA PE=3 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 4.666e-78 Identity = 148/167 (88.62%), Postives = 157/167 (94.01%), Query Frame = -1 Query: 300 ESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYSVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 800 ESLQE+YGI+W+L PI V+ ITIGVLVIVWLEREISAGIQQRIGPEYA P GILQALADGTKLL KENLLPSRG+S LFSIGPS+AVI+ILLSYSVIPFSY LVLADLN+G+FLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL Sbjct: 18 ESLQEIYGIVWMLVPILTLVVGITIGVLVIVWLEREISAGIQQRIGPEYAGPFGILQALADGTKLLLKENLLPSRGDSPLFSIGPSMAVISILLSYSVIPFSYRLVLADLNVGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 184
BLAST of CX078269 vs. ExPASy Swiss-Prot
Match: NU1C_GOSBA (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Gossypium barbadense GN=ndhA PE=3 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 4.666e-78 Identity = 147/170 (86.47%), Postives = 160/170 (94.12%), Query Frame = -1 Query: 300 FPIESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYSVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 809 + +ESL+EVYGI+W+L PI VL ITIGVLVIVWLEREISAGIQQRIGPEYA PLG+LQALADGTKLLFKEN+LPSRGN+ LFSIGP+IAVI+ILLS+SVIPFS L+LADLNIGIFLWIAISSIAP+GLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL Sbjct: 15 YTLESLKEVYGIIWMLVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGLLQALADGTKLLFKENILPSRGNTRLFSIGPAIAVISILLSFSVIPFSSRLILADLNIGIFLWIAISSIAPVGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 184
BLAST of CX078269 vs. ExPASy Swiss-Prot
Match: NU1C_HELAN (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Helianthus annuus GN=ndhA PE=3 SV=1) HSP 1 Score: 290.426 bits (742), Expect = 7.959e-78 Identity = 149/168 (88.69%), Postives = 158/168 (94.05%), Query Frame = -1 Query: 300 IESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYSVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 803 +ESL+EVYGI+WVL PI VL ITIGVLVIVWLEREISAGIQQRIGPEYA PLGILQALADGTKLLFKENLLPSRG++ LFSIGPSIAVI+ILLSY VIPF Y LVLADL+IG+FLWIAISSIAP+GLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL Sbjct: 17 LESLKEVYGIIWVLIPIFTPVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYLVIPFGYRLVLADLSIGVFLWIAISSIAPVGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 184
BLAST of CX078269 vs. ExPASy Swiss-Prot
Match: NU1C_PANGI (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Panax ginseng GN=ndhA PE=3 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 2.316e-77 Identity = 147/170 (86.47%), Postives = 159/170 (93.53%), Query Frame = -1 Query: 300 FPIESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYSVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 809 F +ESL+EVYGI+W+L PI VL ITIGVLVIVWLEREISAGIQQRIGPEYA PLGILQALADGTKLLFKENLLPSRG++ LFSIGPS+AV +ILLSY VIPF Y+LVLADL+IG+FLWIAISSIAP+GLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL Sbjct: 15 FRLESLKEVYGIIWMLIPIFTPVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKENLLPSRGDTRLFSIGPSVAVTSILLSYLVIPFGYHLVLADLSIGVFLWIAISSIAPVGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 184
BLAST of CX078269 vs. ExPASy Swiss-Prot
Match: NU1C_CUCSA (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus GN=ndhA PE=3 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 3.024e-77 Identity = 148/168 (88.10%), Postives = 156/168 (92.86%), Query Frame = -1 Query: 300 IESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYSVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 803 +E L+E YGILWVL PI VL ITIGVLVIVWLEREISAGIQQRIGPEYA PLG+LQALADGTKLLFKENLLPSRG++ LFSIGPSIAVI+ILLSYSVIPF Y LVLADL IG+FLWIAISS+APIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL Sbjct: 17 LEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 184
BLAST of CX078269 vs. ExPASy Swiss-Prot
Match: NU1C_OLIPU (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Olimarabidopsis pumila GN=ndhA PE=3 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 6.738e-77 Identity = 148/168 (88.10%), Postives = 156/168 (92.86%), Query Frame = -1 Query: 300 IESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYSVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 803 +ESL+EVYG++W+ PI VL I GVLVIVWLEREISAGIQQRIGPEYA PLGILQALADGTKLLFKENL PSRGN+ LFSIGPSIAVI+ILLSYSVIPFS +LVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL Sbjct: 17 LESLKEVYGLIWIFVPIFSLVLGIITGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKENLRPSRGNTPLFSIGPSIAVISILLSYSVIPFSNHLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 184 The following BLAST results are available for this feature:
BLAST of CX078269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX078269 ID=CX078269; Name=CX078269; organism=Citrus sinensis; type=EST; length=818bpback to top |