CX078196

Overview
NameCX078196
Unique NameCX078196
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9904 contig Csv1_Contig9904:975..1846. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX078196 vs. ExPASy Swiss-Prot
Match: ETR1_MALDO (Ethylene receptor OS=Malus domestica GN=ETR1 PE=2 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 6.725e-78
Identity = 140/183 (76.50%), Postives = 161/183 (87.98%), Query Frame = -3
Query:  325 FVNLMEGHIWMKSEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPV-HGQTNFPGLKVIVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFRVVSHEHQVVFMDVCVPGIDGYEVAVHIHEKFTRRHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLDKMRSVLSDLLEHRVLFES 870
            FVNLMEGHIW++SEGLGKGCTA FIVKLG PE SN+S L F PK+   H QTNFPGLKV+VMD+NGVSRSVTKGLL HLGCDV  VS ++E   V+S EH+VVFMDV +PGIDGYE+AV IHEKFT+RHERP++VALTGS D +TK+NCMRVG+DGVILKPVS+DKMRSVLS+LLEHRVLFE+
Sbjct:  558 FVNLMEGHIWIESEGLGKGCTATFIVKLGFPERSNESKLPFAPKLQANHVQTNFPGLKVLVMDDNGVSRSVTKGLLAHLGCDVTAVSLIDELLHVISQEHKVVFMDVSMPGIDGYELAVRIHEKFTKRHERPVLVALTGSIDKITKENCMRVGVDGVILKPVSVDKMRSVLSELLEHRVLFEA 740          
BLAST of CX078196 vs. ExPASy Swiss-Prot
Match: ETR1_PRUPE (Ethylene receptor OS=Prunus persica GN=ETR1 PE=2 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 1.402e-75
Identity = 138/183 (75.41%), Postives = 161/183 (87.98%), Query Frame = -3
Query:  325 FVNLMEGHIWMKSEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPV-HGQTNFPGLKVIVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFRVVSHEHQVVFMDVCVPGIDGYEVAVHIHEKFTRRHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLDKMRSVLSDLLEHRVLFES 870
            FVNLMEGHIW++SEG GKGCTAIFIVKLG  E SN+S L F+ K+   H QTNFPGLKV+VMD+NG   SVTKGLL+HLGCDV TVSS++E   V+S EH+VVFMDVC+PGIDGYE+AV IHEKFT+RHERP++VALTG+ D +TK+NCMRVGMDGVILKPVS+DKMRSVLS+LLEHRVLFE+
Sbjct:  558 FVNLMEGHIWIESEGPGKGCTAIFIVKLGFAERSNESKLPFLTKVQANHVQTNFPGLKVLVMDDNG---SVTKGLLVHLGCDVTTVSSIDEFLHVISQEHKVVFMDVCMPGIDGYELAVRIHEKFTKRHERPVLVALTGNIDKMTKENCMRVGMDGVILKPVSVDKMRSVLSELLEHRVLFEA 737          
BLAST of CX078196 vs. ExPASy Swiss-Prot
Match: ETR1_PASED (Ethylene receptor OS=Passiflora edulis GN=ETR1 PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 9.089e-75
Identity = 137/182 (75.27%), Postives = 158/182 (86.81%), Query Frame = -3
Query:  328 FVNLMEGHIWMKSEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPV-HGQTNFPGLKVIVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFRVVSHEHQVVFMDVCVPGIDGYEVAVHIHEKFTRRHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLDKMRSVLSDLLEHRVLFE 870
            FVNLM+GHIW++SEGLGKGCTAIFIVKLGIPE  N+S   F+ K+ V HGQT FPGLKV++MD+NGVSR VTKGLLLHLGCDV TV S EEC RV S +H+VVFMDV +P  +G+E AV +HEKFT+RHERPL+VALT STD +TK+NCMRVGMDG ILKPVS+DKMRSVLSDLLEH+VLFE
Sbjct:  558 FVNLMDGHIWLESEGLGKGCTAIFIVKLGIPERLNESKPPFMSKVAVDHGQTTFPGLKVLLMDDNGVSRMVTKGLLLHLGCDVTTVGSSEECIRVASQDHRVVFMDVGMP--EGFEAAVRLHEKFTKRHERPLVVALTASTDRMTKENCMRVGMDGAILKPVSVDKMRSVLSDLLEHKVLFE 737          
BLAST of CX078196 vs. ExPASy Swiss-Prot
Match: ETR2_PELHO (Ethylene receptor 2 OS=Pelargonium hortorum GN=ETR2 PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.313e-73
Identity = 131/183 (71.58%), Postives = 159/183 (86.89%), Query Frame = -3
Query:  325 FVNLMEGHIWMKSEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPV-HGQTNFPGLKVIVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFRVVSHEHQVVFMDVCVPGIDGYEVAVHIHEKFTRRHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLDKMRSVLSDLLEHRVLFES 870
            FVNLMEGHIW+ SEG GKGCTA F+VKLGIPE S++  L  +PK+P  HGQTNF GLKV+++D+NGVSR+VT+GLL HLGCDV TVSS +E  RVVS +++VVFMDVC+P +DG+E+AV IHEKF  RHERPLIVALTG+ D +TKDNC RVGM+GV+LKPVS+DKMR+VLS+LLEHRVLFE+
Sbjct:  558 FVNLMEGHIWIDSEGPGKGCTATFVVKLGIPERSSEPKLLLMPKVPANHGQTNFSGLKVLLLDDNGVSRAVTRGLLAHLGCDVTTVSSSDELLRVVSQDYKVVFMDVCMPEVDGFEIAVRIHEKFMTRHERPLIVALTGNIDQVTKDNCTRVGMEGVVLKPVSIDKMRNVLSNLLEHRVLFEA 740          
BLAST of CX078196 vs. ExPASy Swiss-Prot
Match: ETR1_TOBAC (Ethylene receptor OS=Nicotiana tabacum GN=ETR1 PE=2 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 1.111e-72
Identity = 133/183 (72.68%), Postives = 156/183 (85.25%), Query Frame = -3
Query:  325 FVNLMEGHIWMKSEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPV-HGQTNFPGLKVIVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFRVVSHEHQVVFMDVCVPGIDGYEVAVHIHEKFTRRHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLDKMRSVLSDLLEHRVLFES 870
            FVNLMEGHIW++SEGLGKG TAIFIVKLGIP  SN+  L F+P++P  H Q  F GLKV++MD+NG SR VTKGLL+HLGCDV TVSS +EC RV++ EH+VVFMDV +PGID YEVAV IHEKF + H RPLIVALTG+TD +TK+NCMRVGMDGVILKPVS+DKMRSVLS+LLEH V+ +S
Sbjct:  556 FVNLMEGHIWIESEGLGKGSTAIFIVKLGIPGRSNEPKLPFMPRLPANHMQMTFQGLKVLIMDDNGFSRMVTKGLLVHLGCDVTTVSSGDECLRVLTQEHKVVFMDVSIPGIDCYEVAVQIHEKFGKHHNRPLIVALTGNTDRVTKENCMRVGMDGVILKPVSVDKMRSVLSELLEHGVILQS 738          
BLAST of CX078196 vs. ExPASy Swiss-Prot
Match: ETR1_PELHO (Ethylene receptor 1 OS=Pelargonium hortorum GN=ETR1 PE=2 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 1.228e-71
Identity = 128/183 (69.95%), Postives = 157/183 (85.79%), Query Frame = -3
Query:  325 FVNLMEGHIWMKSEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPVHG-QTNFPGLKVIVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFRVVSHEHQVVFMDVCVPGIDGYEVAVHIHEKFTRRHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLDKMRSVLSDLLEHRVLFES 870
            FVNLM+GHIW+ SEG  KGCT  F+VKLGIPE SN+  L  +PK+  +  QT+FPGLKV++MDENG+SR VTKGLL+HLGCDV +VSS EEC R+VS +H+VVFMDV VPG+DG+E+AV IHEKF +RHERPLIVALT + D +TK+NC+RVGM+GVILKPVS+DKMR+VLS LLEHR+LFE+
Sbjct:  558 FVNLMDGHIWIDSEGPSKGCTVTFVVKLGIPEGSNEPKLPLMPKVSANNSQTDFPGLKVLLMDENGISRMVTKGLLMHLGCDVTSVSSSEECLRMVSQDHKVVFMDVRVPGLDGHELAVRIHEKFMKRHERPLIVALTSNADKVTKENCLRVGMEGVILKPVSVDKMRNVLSKLLEHRILFEA 740          
BLAST of CX078196 vs. ExPASy Swiss-Prot
Match: ETR1_SOLLC (Ethylene receptor 1 OS=Solanum lycopersicum GN=ETR1 PE=2 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 2.737e-71
Identity = 134/183 (73.22%), Postives = 155/183 (84.70%), Query Frame = -3
Query:  325 FVNLMEGHIWMKSEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPV-HGQTNFPGLKVIVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFRVVSHEHQVVFMDVCVPGIDGYEVAVHIHEKFTRRHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLDKMRSVLSDLLEHRVLFES 870
            FVNLMEGHIW++SEGLGKG TAIFI+KLGIP  +N+S L F+ K+P  H Q +F GLKV+VMDENGVSR VTKGLL HLGCDV TV S +EC RVV+HEH+VV MDV + GID YEVAV IHE+F +RH RPLIVALTG+TD +TK+NCMRVGMDGVILKPVS+ KMRSVLS+LLEH V+ ES
Sbjct:  572 FVNLMEGHIWIESEGLGKGSTAIFIIKLGIPGRANESKLPFVTKLPANHTQMSFQGLKVLVMDENGVSRMVTKGLLTHLGCDVTTVGSRDECLRVVTHEHKVVIMDVSMQGIDCYEVAVVIHERFGKRHGRPLIVALTGNTDRVTKENCMRVGMDGVILKPVSVYKMRSVLSELLEHGVVLES 754          
BLAST of CX078196 vs. ExPASy Swiss-Prot
Match: ETR1_CUCSA (Ethylene receptor 1 OS=Cucumis sativus GN=ETR1 PE=2 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 1.040e-70
Identity = 126/184 (68.48%), Postives = 156/184 (84.78%), Query Frame = -3
Query:  322 FVNLMEGHIWMKSEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPVHG-QTNFPGLKVIVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFRVVSHEHQVVFMDVCVPGIDGYEVAVHIHEKFTRRHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLDKMRSVLSDLLEHRVLFEST 870
            FVNLMEGHIW++SEGLGKGCTA FIVKLGI E SN+S L F  K+  +   T+FPGLKV+VMD+NGVSRSVTKGLL+HLGC+V T  S+EE  RVVS EH+VVFMD+C PG+DGYE+A+ I EKF + HERP +V LTG++D +TK++C+R GMDG+ILKPVS+DKMRSVLS+L+E RVLFE++
Sbjct:  557 FVNLMEGHIWLESEGLGKGCTATFIVKLGIAEQSNESKLPFTSKIHENSIHTSFPGLKVLVMDDNGVSRSVTKGLLVHLGCEVTTAGSIEEFLRVVSQEHKVVFMDICTPGVDGYELAIRIREKFAKCHERPFMVVLTGNSDKVTKESCLRAGMDGLILKPVSIDKMRSVLSELIERRVLFETS 740          
BLAST of CX078196 vs. ExPASy Swiss-Prot
Match: ETR1_BRAOL (Ethylene receptor 1 OS=Brassica oleracea GN=ETR1 PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.774e-70
Identity = 130/183 (71.04%), Postives = 156/183 (85.25%), Query Frame = -3
Query:  325 FVNLMEGHIWMKSEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPVHGQ-TNFPGLKVIVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFRVVSHEHQVVFMDVCVPGIDGYEVAVHIHEKFTRRHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLDKMRSVLSDLLEHRVLFES 870
            FVNLMEG+IW++SEG+GKGCTAIF VKL I   SN+S  S IPK+P + Q  NF GLKV+VMDENGVSR VTKGLL+HLGC+V TVSS EEC RVVSHEH+VVFMDVC PG++ Y++A+ IHEKFT+RH+RPL+VALTG+TD  TK+ CM  G+DGV+LKPVSLD MR+VLSD LEHRVL+E+
Sbjct:  555 FVNLMEGNIWIESEGVGKGCTAIFDVKLAI---SNESKQSGIPKVPANPQHVNFAGLKVLVMDENGVSRMVTKGLLVHLGCEVTTVSSNEECLRVVSHEHRVVFMDVCTPGVENYQIALRIHEKFTKRHQRPLLVALTGNTDKSTKEKCMSFGLDGVLLKPVSLDNMRNVLSDRLEHRVLYEA 734          
BLAST of CX078196 vs. ExPASy Swiss-Prot
Match: ETR1_CUCMR (Ethylene receptor 1 OS=Cucumis melo var. reticulatus GN=ETR1 PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 5.161e-70
Identity = 124/184 (67.39%), Postives = 156/184 (84.78%), Query Frame = -3
Query:  322 FVNLMEGHIWMKSEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPVHG-QTNFPGLKVIVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFRVVSHEHQVVFMDVCVPGIDGYEVAVHIHEKFTRRHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLDKMRSVLSDLLEHRVLFEST 870
            FVNLMEGHIW++SEGLGKGCTA FIVKLGI + SN+S L +  K+  +   T+FPGLKV+VMD+NGVSRSVTKGLL+HLGC+V T  S+EE  RVVS EH+VVFMD+C PG+DGYE+A+ I EKF + HERP +V LTG++D +TK++C+R GMDG+ILKPVS+DKMRSVLS+L+E RVLFE++
Sbjct:  557 FVNLMEGHIWLESEGLGKGCTATFIVKLGIADQSNESKLPYTSKIHENSIHTSFPGLKVLVMDDNGVSRSVTKGLLVHLGCEVTTAGSIEEFLRVVSQEHKVVFMDICTPGVDGYELAIRIREKFAKCHERPFMVVLTGNSDKVTKESCLRAGMDGLILKPVSIDKMRSVLSELIERRVLFETS 740          
The following BLAST results are available for this feature:
BLAST of CX078196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
ETR1_MALDO6.725e-7876.50Ethylene receptor OS=Malus domestica GN=ETR1 PE=2 ... [more]
ETR1_PRUPE1.402e-7575.41Ethylene receptor OS=Prunus persica GN=ETR1 PE=2 S... [more]
ETR1_PASED9.089e-7575.27Ethylene receptor OS=Passiflora edulis GN=ETR1 PE=... [more]
ETR2_PELHO1.313e-7371.58Ethylene receptor 2 OS=Pelargonium hortorum GN=ETR... [more]
ETR1_TOBAC1.111e-7272.68Ethylene receptor OS=Nicotiana tabacum GN=ETR1 PE=... [more]
ETR1_PELHO1.228e-7169.95Ethylene receptor 1 OS=Pelargonium hortorum GN=ETR... [more]
ETR1_SOLLC2.737e-7173.22Ethylene receptor 1 OS=Solanum lycopersicum GN=ETR... [more]
ETR1_CUCSA1.040e-7068.48Ethylene receptor 1 OS=Cucumis sativus GN=ETR1 PE=... [more]
ETR1_BRAOL1.774e-7071.04Ethylene receptor 1 OS=Brassica oleracea GN=ETR1 P... [more]
ETR1_CUCMR5.161e-7067.39Ethylene receptor 1 OS=Cucumis melo var. reticulat... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_7F02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-7F02-L3-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078196 ID=CX078196; Name=CX078196; organism=Citrus sinensis; type=EST; length=872bp
CTTTTTTTTTTGTTCACAAGTTACTATATTATAATTTCTGTTTCCCAAAG
CTTACAAAACAAGAAATCAGAAACCACAGGCAGAAATTTCACAAATCTGT
TAGTATTTCTTTGCCACTGCGTTCATAACAATTTGCAAAAAAATGCAAGT
TTAATGAACAAACCTGCCCTTTGTGTACATTTGTTATTTGGACCACTCTA
TTGAAAAGCTCTATCACAAAGTGGTATCTACCAAAAACCAAATGCTGTAG
AGAAAGCTCTCACGTTACCTTAAATATTTTTTCCCCCCACTTAAAAGGTG
TAGAAGCATTCTCCGTTTTTACGTGGACTCAAAGAGAACCCGGTGTTCCA
AAAGATCTGACAAAACACTCCTCATTTTATCAAGTGAAACAGGTTTTAGG
ATAACTCCATCCATTCCAACCCTCATGCAATTATCCTTGGTCAAATTGTC
AGTACTTCCAGTAAGGGCTACTATTAATGGCCTTTCATGACGCCTCGTAA
ATTTTTCATGTATATGGACAGCGACTTCATAACCATCAATTCCAGGCACG
CAAACGTCCATGAAGACCACCTGGTGTTCGTGAGAAACAACTCGGAAGCA
CTCCTCAACAGAGCTCACCGTCATTACATCACATCCCAGGTGCAACAGAA
GTCCCTTAGTCACTGACCTGCTAACACCATTTTCATCCATGACAATTACT
TTAAGCCCTGGAAAATTGGTCTGTCCGTGTACCGGCATTTTTGGAATAAA
GGAGAGGTTAGAATCATTTGAGTGCTCCGGAATCCCAAGTTTTACAATGA
AGATGGCAGTACAACCCTTTCCAAGACCTTCACTTTTCATCCAGATATGT
CCCTCCATAAGATTCACAAACC
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