CX078189

Overview
NameCX078189
Unique NameCX078189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length795
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10867 contig Csv1_Contig10867:654..1448. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX078189 vs. ExPASy Swiss-Prot
Match: NEP1_NEPGR (Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.193e-36
Identity = 95/264 (35.98%), Postives = 141/264 (53.41%), Query Frame = 3
Query:    3 ECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVSACRANRCLYQVAYGDGSYTVGDLVTETVSFGNSGSVKGIALGCGHDNE-XXXXXXXXXXXXXXXXXXXTKQIKAMSLAYCL--VDRDSPASGVLE--FNSARGGDAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMD-EAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVAL-FDTCYDF-SGLRSVRVPTVSLHFGAGKALDLPAKNYLI 770
            +C+ QS PIF+P+ SSS+S LPC++  C++L    C  N C Y   YGDGS T G + TET++FG S S+  I  GCG +N+                      Q+     +YC+  +   +P++ +L    NS   G   T  LI++ ++ TFYY+ L G SVG   + I PS F ++   G GGII+D GT +T     AY S+R  F+    NL   +G +  FD C+   S   ++++PT  +HF  G  L+LP++NY I
Sbjct:  128 QCFNQSTPIFNPQGSSSFSTLPCSSQLCQALSSPTCSNNFCQYTYGYGDGSETQGSMGTETLTFG-SVSIPNITFGCGENNQGFGQGNGAGLVGMGRGPLSLPSQLDVTKFSYCMTPIGSSTPSNLLLGSLANSVTAGSPNTT-LIQSSQIPTFYYITLNGLSVGSTRLPIDPSAFALNSNNGTGGIIIDSGTTLTYFVNNAYQSVRQEFISQI-NLPVVNGSSSGFDLCFQTPSDPSNLQIPTFVMHFDGGD-LELPSENYFI 387          
BLAST of CX078189 vs. ExPASy Swiss-Prot
Match: NEP2_NEPGR (Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.055e-35
Identity = 93/264 (35.23%), Postives = 134/264 (50.76%), Query Frame = 3
Query:    3 ECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVSACRANRCLYQVAYGDGSYTVGDLVTETVSFGNSGSVKGIALGCGHDNE-XXXXXXXXXXXXXXXXXXXTKQIKAMSLAYCLVDRDSPASGVLEFNSARGGDAVTAP---LIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSF---VRLAGNLKPTSGVALFDTCYDF-SGLRSVRVPTVSLHFGAGKALDLPAKNYLI 770
            +C+ Q  PIF+P+ SSS+S LPC +  C+ L    C  N C Y   YGDGS T G + TET +F  S SV  IA GCG DN+                      Q+     +YC+    S +   L   SA  G    +P   LI +    T+YY+ L G +VGG  + IP S F++ + G GG+I+D GT +T L   AYN++  +F   + L    + +SG++   TC+   S   +V+VP +S+ F  G  L+L  +N LI
Sbjct:  129 QCFSQPTPIFNPQDSSSFSTLPCESQYCQDLPSETCNNNECQYTYGYGDGSTTQGYMATETFTFETS-SVPNIAFGCGEDNQGFGQGNGAGLIGMGWGPLSLPSQLGVGQFSYCMTSYGSSSPSTLALGSAASGVPEGSPSTTLIHSSLNPTYYYITLQGITVGGDNLGIPSSTFQLQDDGTGGMIIDSGTTLTYLPQDAYNAVAQAFTDQINLPTVDESSSGLS---TCFQQPSDGSTVQVPEISMQFDGG-VLNLGEQNILI 387          
The following BLAST results are available for this feature:
BLAST of CX078189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
NEP1_NEPGR4.193e-3635.98Aspartic proteinase nepenthesin-1 OS=Nepenthes gra... [more]
NEP2_NEPGR6.055e-3535.23Aspartic proteinase nepenthesin-2 OS=Nepenthes gra... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_7E10_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-7E10-J19-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078189 ID=CX078189; Name=CX078189; organism=Citrus sinensis; type=EST; length=795bp
CCGAGTGTTATCAACAATCCGATCCGATTTTTGACCCAAAAACGTCATCG
TCTTACAGTCCTCTCCCGTGTGCCGCTCCTCAGTGTAAATCCCTCGACGT
GTCCGCTTGTCGTGCGAACAGGTGCCTCTACCAAGTGGCGTACGGTGATG
GATCTTATACCGTGGGTGATTTGGTGACTGAAACGGTGTCGTTTGGAAAC
AGCGGGAGCGTGAAGGGTATCGCTTTGGGTTGCGGTCATGATAATGAAGG
GCTCTTTGTTGGATCTGCCGGCTTGCTTGGACTTGGGGGTGGCATGCTCT
CTCTTACTAAGCAAATTAAAGCGATGTCATTGGCATACTGCTTGGTGGAC
CGTGACTCTCCCGCCTCTGGTGTTCTCGAGTTCAACTCGGCACGAGGCGG
TGACGCGGTCACGGCTCCGTTGATTAGGAACAAAAAAGTTGACACGTTCT
ATTACGTGGGGCTCACTGGATTCAGCGTCGGTGGTCAGGCGGTCCAAATC
CCACCATCGCTTTTTGAAATGGACGAAGCAGGCGACGGCGGGATTATTGT
TGATTGTGGAACCGCCATAACTCGCCTGCAGACTCAGGCCTACAACTCGC
TCCGCGACTCTTTCGTCAGGCTGGCGGGTAACTTGAAACCCACCAGCGGG
GTCGCTTTATTCGACACGTGCTACGATTTCTCCGGATTAAGGAGTGTTAG
GGTCCCAACGGTGTCGCTTCACTTCGGTGCTGGAAAAGCTCTTGATTTAC
CCGCCAAAAATTACTTGATTCCAGTAGACTCGGCTGGGACTTTCT
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