EY702373

Overview
NameEY702373
Unique NameEY702373
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY702373_ssr220 microsatellite EY702373_ssr220:220..231. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1886 contig Csv1_Contig1886:25..918. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702373 vs. ExPASy Swiss-Prot
Match: MOMAS_ORYSJ (Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 4.134e-70
Identity = 142/260 (54.62%), Postives = 185/260 (71.15%), Query Frame = 1
Query:   67 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMY---SNLXGA-VLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAXVNA 834
            R+L GKVA+ITGGA GIG CTARLF KHGA+V++ADI+D+LG S+  ++           YVHCDVT E D+  AV+ AV ++GKLD+MFNNAG        + +  + +FER+L++NLVG FLGTKHAARVM PA RGSIISTAS+   + GAA+HAY +SKH L+G  +N A ELGR GIRVNCVSP  V+TPLA+  + + D+ +  +    +NL GA  L+ +DIA AAL+L SD+ + VSG NL VDGG + VN+
Sbjct:   13 RKLVGKVAVITGGASGIGACTARLFVKHGARVVVADIQDELGASLVAELGPDASS-----YVHCDVTNEGDVAAAVDHAVARFGKLDVMFNNAGVSGPPCFRMSECTKEDFERVLAVNLVGPFLGTKHAARVMAPARRGSIISTASLSSSVSGAASHAYTTSKHALVGFTENAAGELGRHGIRVNCVSPAGVATPLARAAMGMDDEAIEAIMANSANLKGAGALKADDIAAAALFLASDDGRYVSGQNLRVDGGLSVVNS 267          
BLAST of EY702373 vs. ExPASy Swiss-Prot
Match: ABA2_ARATH (Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.429e-62
Identity = 131/269 (48.70%), Postives = 166/269 (61.71%), Query Frame = 1
Query:   67 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFL---KLADDGLGGM------YSNLXGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAXVNAGXSV 846
            +RL GKVALITGGA GIGE   RLF KHGAKV I D++DDLG  VCK +           ++H DV  E DI NAV+ AV  +G LDI+ NNAG      P+I +   +EFE    +N+ GAFL  KHAARVM P  +GSI+S  SV G++GG   H+Y  SKH +LGL ++ A ELG+ GIRVNCVSPY V+T LA   L   +  +D   G        +NL G  L  +D+A A L+L SD+S+ +SG NL++DGGF   N    V
Sbjct:   16 QRLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAF-FIHGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLSEFEMTFDVNVKGAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAELGQHGIRVNCVSPYAVATKLALAHLPEEERTEDAFVGFRNFAAANANLKGVELTVDDVANAVLFLASDDSRYISGDNLMIDGGFTCTNHSFKV 283          
BLAST of EY702373 vs. ExPASy Swiss-Prot
Match: TS2_MAIZE (Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 4.013e-57
Identity = 127/282 (45.04%), Postives = 168/282 (59.57%), Query Frame = 1
Query:   67 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYG-KLDIMFNNAGTVDE---VKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTP----------------------LAKDFLKLADDGLGGM------YSNLXGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 816
            +RL GKVA++TGGARGIGE   RLF+KHGA+V+IADI D  GE++   +           +V CDV+ E D+  AV+ A++++G +LD+  NNAG +        +IL  D AEF+R+L +N +GA LG KHAAR M P   GSI+S ASV  ++GG   HAY +SKH ++GL KN A EL   G+RVNCVSP+ V+TP                      L  D    +D  +  M       + L G  L P DIAEA L+L SDE++ +SGHNLVVDGG
Sbjct:   51 KRLDGKVAIVTGGARGIGEAIVRLFAKHGARVVIADIDDAAGEALASALGPQVS------FVRCDVSVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRAGSIVSVASVAAVLGGLGPHAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINAWRQGHDDATADADRDLDLDLDVTVPSDQEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGG 326          
BLAST of EY702373 vs. ExPASy Swiss-Prot
Match: HSD_MYCTU (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium tuberculosis GN=fabG3 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.792e-42
Identity = 102/249 (40.96%), Postives = 142/249 (57.03%), Query Frame = 1
Query:   70 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLXGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 816
            RL GKVAL++GGARG+G    R     GAKV+  DI D+ G++V  ++           YVH DVT+      AV+TAVT +G L ++ NNAG ++     I D    E++RIL +NL G FLG +   + MK AGRGSII+ +S+ G+ G  A H Y ++K  + GL K+TA+ELG  GIRVN + P +V TP       + D     ++    G   EP +++   +YL SDES   +G   VVDGG
Sbjct:    4 RLIGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAVAAELADAAR------YVHLDVTQPAQWTAAVDTAVTAFGGLHVLVNNAGILNI--GTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTP-------MTDWVPEDIFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG 237          
BLAST of EY702373 vs. ExPASy Swiss-Prot
Match: HSD_MYCBO (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium bovis GN=fabG3 PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.792e-42
Identity = 102/249 (40.96%), Postives = 142/249 (57.03%), Query Frame = 1
Query:   70 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLXGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 816
            RL GKVAL++GGARG+G    R     GAKV+  DI D+ G++V  ++           YVH DVT+      AV+TAVT +G L ++ NNAG ++     I D    E++RIL +NL G FLG +   + MK AGRGSII+ +S+ G+ G  A H Y ++K  + GL K+TA+ELG  GIRVN + P +V TP       + D     ++    G   EP +++   +YL SDES   +G   VVDGG
Sbjct:    4 RLIGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAVAAELADAAR------YVHLDVTQPAQWTAAVDTAVTAFGGLHVLVNNAGILNI--GTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTP-------MTDWVPEDIFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG 237          
BLAST of EY702373 vs. ExPASy Swiss-Prot
Match: BACC2_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.028e-36
Identity = 92/255 (36.08%), Postives = 144/255 (56.47%), Query Frame = 1
Query:   73 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPL-AKDFLKLADDGLGGMYS-----NLXGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGF 819
            L  K  LITGGA GIG    + F    A V++ADI +  GE++ +             +VH D+T E   +NA+ +AV ++G LD++ NNAG   E+   I + + + + ++L++NL G FL +KHA + M  +G+G+II+T SV G++      AY +SK G+L L ++ AV+  +  IRVNCV P ++ TPL  K FL+  +  L  +       N    + +PE+IA   L+L SD S  ++G  +  DGG+
Sbjct:    3 LTDKTVLITGGASGIGYAAVQAFLNQQANVVVADIDEAQGEAMIRK-----ENNDRLHFVHTDITDEPACQNAIRSAVDKFGGLDVLINNAGI--EIVAPIHEMELSNWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVGGVVAWPDIPAYNASKGGVLQLTRSMAVDYAKHNIRVNCVCPGIIDTPLNEKSFLENNEGTLEEIKKEKAKVNPLLRLGKPEEIANVMLFLASDLSSYMTGSAITADGGY 250          
BLAST of EY702373 vs. ExPASy Swiss-Prot
Match: CPNA_COMTE (Cyclopentanol dehydrogenase OS=Comamonas testosteroni GN=cpnA PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.342e-36
Identity = 87/250 (34.80%), Postives = 136/250 (54.40%), Query Frame = 1
Query:   70 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLXGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGF 819
            R+  KV L+TGGA G+G     L ++ GA V ++D+ ++LG     +I           ++H DVT E     AV+T + +  +LD + NNAG +  +KP + D    E++RI  IN+   FLGT+     M+ A +G I++ +S+ G++G     AY +SK  +    K  AV+L  F IRVN V P V++TP+ +  L         +   L G   +P ++++A L+L SDE+  V G  LVVDGG+
Sbjct:    3 RVNDKVVLVTGGAMGMGLTHCTLLAREGATVYLSDMNEELGHQAVAEIRRQGGKAH---FLHLDVTNENHWTGAVDTILAESDRLDALVNNAGILT-LKP-VQDTSNEEWDRIFEINVRSVFLGTRAVIEPMRKAHKGCIVNVSSIYGLVGAPGAAAYEASKGAVRLFTKACAVDLAPFNIRVNSVHPGVIATPMTQQILDAPQSARALLGPTLLGRAAQPMEVSQAVLFLVSDEASFVHGSELVVDGGY 247          
BLAST of EY702373 vs. ExPASy Swiss-Prot
Match: CPNA_COMS9 (Cyclopentanol dehydrogenase OS=Comamonas sp. (strain NCIMB 9872) GN=cpnA PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.342e-36
Identity = 87/250 (34.80%), Postives = 136/250 (54.40%), Query Frame = 1
Query:   70 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLXGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGF 819
            R+  KV L+TGGA G+G     L ++ GA V ++D+ ++LG     +I           ++H DVT E     AV+T + +  +LD + NNAG +  +KP + D    E++RI  IN+   FLGT+     M+ A +G I++ +S+ G++G     AY +SK  +    K  AV+L  F IRVN V P V++TP+ +  L         +   L G   +P ++++A L+L SDE+  V G  LVVDGG+
Sbjct:    3 RVNDKVVLVTGGAMGMGLTHCTLLAREGATVYLSDMNEELGHQAVAEIRRQGGKAH---FLHLDVTNENHWTGAVDTILAESDRLDALVNNAGILT-LKP-VQDTSNEEWDRIFEINVRSVFLGTRAVIEPMRKAHKGCIVNVSSIYGLVGAPGAAAYEASKGAVRLFTKACAVDLAPFNIRVNSVHPGVIATPMTQQILDAPQSARALLGPTLLGRAAQPMEVSQAVLFLVSDEASFVHGSELVVDGGY 247          
BLAST of EY702373 vs. ExPASy Swiss-Prot
Match: BACC_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 5.639e-35
Identity = 93/255 (36.47%), Postives = 142/255 (55.69%), Query Frame = 1
Query:   73 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPL-AKDFLKLADDGLGGMYS-----NLXGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGF 819
            L  K  LITGGA GIG    + F    A V++ADI +  GE++ +             +V  D+T E   ++AV +AV  +G LD++ NNAG   E+   I + + +++ ++L +NL G FL +KHA + M  AG+G+II+T SV G++      AY +SK G+L L K+ AV+  +  IRVNCV P ++ TPL  K FL+  +  L  +       N    + +PE+IA   L+L SD S  ++G  +  DGG+
Sbjct:    3 LTDKTVLITGGASGIGYAAVQAFLGQQANVVVADIDEAQGEAMVRK-----ENNDRLHFVQTDITDEAACQHAVESAVHTFGGLDVLINNAGI--EIVAPIHEMELSDWNKVLQVNLTGMFLMSKHALKHMLAAGKGNIINTCSVGGLVAWPDIPAYNASKGGVLQLTKSMAVDYAKHQIRVNCVCPGIIDTPLNEKSFLENNEGTLEEIKKEKAKVNPLLRLGKPEEIANVMLFLASDLSSYMTGSAITADGGY 250          
BLAST of EY702373 vs. ExPASy Swiss-Prot
Match: HSD_STREX (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Streptomyces exfoliatus PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.143e-34
Identity = 98/255 (38.43%), Postives = 139/255 (54.51%), Query Frame = 1
Query:   73 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAE-FERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGL---GGMYSN--LXGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGF 819
            L GK  +ITGGARG+G   AR     GA+V++AD+ D+ G +  +++           Y H DVT E+D +  V  A  ++G +D + NNAG    +    L+ +  E F +++ INL G F+G K     MK AG GSI++ +S  G++G A T +Y +SK G+ GL K  AVELG   IRVN V P +  TP+       A+ G+    G Y N  +     EP +IA A + L SD S  V+G  L VDGG+
Sbjct:    4 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAAR------YQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGM---FLETESVERFRKVVDINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMT------AETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGW 243          
The following BLAST results are available for this feature:
BLAST of EY702373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
MOMAS_ORYSJ4.134e-7054.62Momilactone A synthase OS=Oryza sativa subsp. japo... [more]
ABA2_ARATH2.429e-6248.70Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN... [more]
TS2_MAIZE4.013e-5745.04Sex determination protein tasselseed-2 OS=Zea mays... [more]
HSD_MYCTU2.792e-4240.963-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
HSD_MYCBO2.792e-4240.963-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
BACC2_BACSU1.028e-3636.08Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
CPNA_COMTE1.342e-3634.80Cyclopentanol dehydrogenase OS=Comamonas testoster... [more]
CPNA_COMS91.342e-3634.80Cyclopentanol dehydrogenase OS=Comamonas sp. (stra... [more]
BACC_BACSU5.639e-3536.47Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
HSD_STREX2.143e-3438.433-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-006-C07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702373 ID=EY702373; Name=EY702373; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGGGTTGCTGTGCGTGCTATAAGAATGGGCAGTGCTTCAGT
TGTCTCAGCTGCAGCAAGAAGGCTACAAGGCAAAGTGGCACTTATCACAG
GAGGAGCAAGAGGCATTGGGGAATGCACTGCAAGGCTCTTCTCAAAACAT
GGAGCTAAAGTACTCATTGCAGATATTAAAGATGACTTGGGCGAATCTGT
ATGCAAAGACATAGGCTCTTCATCATCATCAGCCAGCGGCTGCTCCTATG
TCCATTGTGATGTAACCAAAGAGAAAGATATCGAAAACGCCGTTAACACG
GCAGTCACTCAGTACGGAAAGCTAGACATTATGTTCAATAACGCCGGCAC
TGTGGATGAAGTCAAACCTAACATACTCGATAACGATCAGGCTGAATTTG
AGCGCATACTTTCCATTAACCTCGTTGGCGCATTTTTGGGGACGAAACAT
GCTGCTAGGGTGATGAAACCCGCCGGACGAGGCAGCATAATTTCAACTGC
GAGCGTTTGCGGAATCATTGGTGGCGCTGCAACACATGCATACGCTAGTT
CAAAGCATGGCCTTTTGGGGCTGATGAAGAATACTGCTGTGGAGCTTGGA
CGATTTGGCATTAGGGTCAATTGTGTGTCACCTTATGTGGTCTCAACTCC
ATTAGCTAAGGATTTTCTCAAGCTTGCTGATGATGGTTTGGGCGGCATGT
ATTCAAATCTTAANGGGGCTGTTCTTGAGCCTGAGGATATAGCTGAAGCT
GCTCTTTATTTGGGGAGTGATGAGTCTAAGTGTGTGAGTGGGCATAATTT
GGTCGTAGATGGAGGATTTGCTANTGTCAATGCAGGNNTTTCTGTNGTTG
GGAAATCTGAATGAGTGTATTTCCGAAAGCTGCATNGTTTGATC
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