CX078124
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX078124 vs. ExPASy Swiss-Prot
Match: CPL4_ARATH (RNA polymerase II C-terminal domain phosphatase-like 4 OS=Arabidopsis thaliana GN=CPL4 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.162e-20 Identity = 32/58 (55.17%), Postives = 42/58 (72.41%), Query Frame = -3 Query: 466 QREVLKGCKLVFSHAFPSKFPAHIHYLWKVVEQLGATCSIELDPSVTHVVSNKCSNEK 639 ++E+LKGCK+VFS FP+K H LWK+ E+LGATC+ E+D SVTHVV+ EK Sbjct: 338 RKEILKGCKIVFSRVFPTKAKPEDHPLWKMAEELGATCATEVDASVTHVVAMDVGTEK 395 HSP 2 Score: 47.3654 bits (111), Expect = 3.162e-20 Identity = 20/43 (46.51%), Postives = 29/43 (67.44%), Query Frame = -1 Query: 345 TKKSHWAAKEAKFLVDPRWIEAANCLWQGQLEEKFPVKQTKPE 473 T+K+ WA +E K++V WI+AAN LW Q EE F ++Q K + Sbjct: 393 TEKARWAVREKKYVVHRGWIDAANYLWMKQPEENFGLEQLKKQ 435
BLAST of CX078124 vs. ExPASy Swiss-Prot
Match: CPL3_ARATH (RNA polymerase II C-terminal domain phosphatase-like 3 OS=Arabidopsis thaliana GN=CPL3 PE=1 SV=2) HSP 1 Score: 62.7734 bits (151), Expect = 7.763e-13 Identity = 27/61 (44.26%), Postives = 40/61 (65.57%), Query Frame = -3 Query: 460 QREVLKGCKLVFSHAFP-SKFPAHIHYLWKVVEQLGATCSIELDPSVTHVVSNKCSNEKVS 639 QR++L GC++VFS P + H+H LW+ EQ GA C+ ++D VTHVV+N +KV+ Sbjct: 1147 QRKILAGCRIVFSRIIPVGEAKPHLHPLWQTAEQFGAVCTTQVDEHVTHVVTNSLGTDKVN 1207 HSP 2 Score: 31.9574 bits (71), Expect = 7.763e-13 Identity = 13/37 (35.14%), Postives = 21/37 (56.76%), Query Frame = -1 Query: 363 TKKSHWAAKEAKFLVDPRWIEAANCLWQGQLEEKFPV 473 T K +WA +F+V P W+EA+ L+Q E + + Sbjct: 1203 TDKVNWALTRGRFVVHPGWVEASAFLYQRANENLYAI 1239 The following BLAST results are available for this feature:
BLAST of CX078124 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX078124 ID=CX078124; Name=CX078124; organism=Citrus sinensis; type=EST; length=788bpback to top |