CX078085

Overview
NameCX078085
Unique NameCX078085
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length619
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3018 contig Csv1_Contig3018:197..815. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADH1_PETHY (Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 4.182e-74
Identity = 133/151 (88.08%), Postives = 144/151 (95.36%), Query Frame = 3
Query:    3 PSRFNEAKKFGVTEFVNPKDY-DKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 452
            PSRFN+AKKFGVTEFVNPKD+ DKPVQQVIA+MT+GGVDRSVECTG+V AMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKP+SD+PSVV+KYM KELE+EKFITH VPFSEINKAFD ML GESIRC+I M+
Sbjct:  231 PSRFNDAKKFGVTEFVNPKDHGDKPVQQVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPKSDIPSVVDKYMKKELELEKFITHQVPFSEINKAFDYMLKGESIRCMITME 381          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADH1_PEA (Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 7.888e-73
Identity = 129/149 (86.58%), Postives = 141/149 (94.63%), Query Frame = 3
Query:    6 SRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 452
            SRF  AKKFGV EFVNPK++DKPVQQVIA+MTNGGVDR+VECTGS+QAMISAFECVHDGWGVAVLVGVP+KDDAFKTHPMN LNERTLKGTF+GNYKPR+DLP+VVEKYM  ELE+EKFITHTVPFSEINKAFD ML GESIRCII+M+
Sbjct:  231 SRFELAKKFGVNEFVNPKEHDKPVQQVIAEMTNGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPSKDDAFKTHPMNFLNERTLKGTFYGNYKPRTDLPNVVEKYMKGELELEKFITHTVPFSEINKAFDYMLKGESIRCIIKME 379          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADH1_ARATH (Alcohol dehydrogenase class-P OS=Arabidopsis thaliana GN=ADH1 PE=1 SV=2)

HSP 1 Score: 272.322 bits (695), Expect = 1.345e-72
Identity = 128/147 (87.07%), Postives = 140/147 (95.24%), Query Frame = 3
Query:    9 RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 449
            RF++AK+FGVTE VNPKD+DKP+QQVIA+MT+GGVDRSVECTGSVQAMI AFECVHDGWGVAVLVGVP+KDDAFKTHPMN LNERTLKGTFFGNYKP++D+P VVEKYMNKELE+EKFITHTVPFSEINKAFD ML GESIRCII M
Sbjct:  231 RFDQAKEFGVTECVNPKDHDKPIQQVIAEMTDGGVDRSVECTGSVQAMIQAFECVHDGWGVAVLVGVPSKDDAFKTHPMNFLNERTLKGTFFGNYKPKTDIPGVVEKYMNKELELEKFITHTVPFSEINKAFDYMLKGESIRCIITM 377          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADH1_SOLTU (Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 2.295e-72
Identity = 127/149 (85.23%), Postives = 140/149 (93.96%), Query Frame = 3
Query:    6 SRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 452
            SRF +AKKFGVTEFVNPKDY KPVQ+VIA+MT+GGVDRSVECTG + AMISAFECVHDGWGVAVLVGVP+K+  FKTHPMNLLNERTLKGTFFGNYKPRSD+PSVVEKYMNKELE+EKFITHT+PF+EINKAFDLML GE +RCII M+
Sbjct:  231 SRFEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPMNLLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITME 379          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADH3_SOLTU (Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 6.677e-72
Identity = 126/149 (84.56%), Postives = 139/149 (93.29%), Query Frame = 3
Query:    6 SRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 452
            SRF +AKKFGVTEFVNPKDY KPVQ+VIA+MT+GGVDRSVECTG + AMISAFECVHDGWGVAVLVGVP+K+  FKTHPMN LNERTLKGTFFGNYKPRSD+PSVVEKYMNKELE+EKFITHT+PF+EINKAFDLML GE +RCII M+
Sbjct:  231 SRFEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITME 379          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADH2_SOLTU (Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 6.677e-72
Identity = 126/149 (84.56%), Postives = 139/149 (93.29%), Query Frame = 3
Query:    6 SRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 452
            SRF +AKKFGVTEFVNPKDY KPVQ+VIA+MT+GGVDRSVECTG + AMISAFECVHDGWGVAVLVGVP+K+  FKTHPMN LNERTLKGTFFGNYKPRSD+PSVVEKYMNKELE+EKFITHT+PF+EINKAFDLML GE +RCII M+
Sbjct:  231 SRFEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITME 379          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADH1_TRIRP (Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH1 PE=2 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 6.677e-72
Identity = 127/149 (85.23%), Postives = 140/149 (93.96%), Query Frame = 3
Query:    6 SRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 452
            SRF  AKKFGV EFVNPKD+DKPVQQVIA+MT+GGVDR+VECTGS+QAMISAFECVHDGWGVAVLVGVP KDDAFKTHPMN LNERTLKGTF+GNYKPR+DLP+VVE+YM  ELE+EKFITH++PFSEINKAFD ML GESIRCIIRM+
Sbjct:  231 SRFELAKKFGVNEFVNPKDHDKPVQQVIAEMTDGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPKKDDAFKTHPMNFLNERTLKGTFYGNYKPRTDLPNVVEQYMKGELELEKFITHSIPFSEINKAFDYMLKGESIRCIIRME 379          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADH1_PENAM (Alcohol dehydrogenase 1 OS=Pennisetum americanum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 1.943e-71
Identity = 126/150 (84.00%), Postives = 138/150 (92.00%), Query Frame = 3
Query:    3 PSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 452
            PSRF EAKKFG TEFVNPKD++KPVQ+V+ADMTNGGVDRSVECTG++ AMI AFECVHDGWGVAVLVGVP+KD  FKTHPMN LNERTLKGTFFGN+KPR+DLP+VVE YM KELEVEKFITH+VPFSEINKAFDLM  GE IRCIIRM+
Sbjct:  229 PSRFEEAKKFGCTEFVNPKDHNKPVQEVLADMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNFKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINKAFDLMAKGEGIRCIIRME 378          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADH2_SOLLC (Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN=ADH2 PE=2 SV=2)

HSP 1 Score: 266.159 bits (679), Expect = 9.642e-71
Identity = 124/148 (83.78%), Postives = 137/148 (92.57%), Query Frame = 3
Query:    6 SRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 449
            SRF +AKKFGVTEFVNPKDY KPVQ+VIA+MT+GGVDRSVECTG + AMISAFECVHDGWGVAVLVGVP+K+  FKTHP+N LNERTLKGTFFGNYKPRSD+P VVEKYMNKELE+EKFITHT+PF+EINKAFDLML GE +RCII M
Sbjct:  231 SRFEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPLNFLNERTLKGTFFGNYKPRSDIPCVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITM 378          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADH1_MAIZE (Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 9.642e-71
Identity = 124/150 (82.67%), Postives = 138/150 (92.00%), Query Frame = 3
Query:    3 PSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 452
            PSRF EA+KFG TEFVNPKD++KPVQ+V+A+MTNGGVDRSVECTG++ AMI AFECVHDGWGVAVLVGVP+KD  FKTHPMN LNERTLKGTFFGNYKPR+DLP+VVE YM KELEVEKFITH+VPF+EINKAFDLM  GE IRCIIRM+
Sbjct:  229 PSRFEEARKFGCTEFVNPKDHNKPVQEVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFAEINKAFDLMAKGEGIRCIIRME 378          
The following BLAST results are available for this feature:
BLAST of CX078085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
ADH1_PETHY4.182e-7488.08Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1... [more]
ADH1_PEA7.888e-7386.58Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1[more]
ADH1_ARATH1.345e-7287.07Alcohol dehydrogenase class-P OS=Arabidopsis thali... [more]
ADH1_SOLTU2.295e-7285.23Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=AD... [more]
ADH3_SOLTU6.677e-7284.56Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=AD... [more]
ADH2_SOLTU6.677e-7284.56Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=AD... [more]
ADH1_TRIRP6.677e-7285.23Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH... [more]
ADH1_PENAM1.943e-7184.00Alcohol dehydrogenase 1 OS=Pennisetum americanum G... [more]
ADH2_SOLLC9.642e-7183.78Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN... [more]
ADH1_MAIZE9.642e-7182.67Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_6H05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-6H05-O10-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078085 ID=CX078085; Name=CX078085; organism=Citrus sinensis; type=EST; length=619bp
ACCCAAGCAGATTCAATGAAGCCAAGAAGTTTGGGGTTACCGAGTTTGTG
AATCCAAAAGATTATGACAAACCTGTTCAACAGGTGATTGCTGACATGAC
CAATGGTGGAGTGGATAGAAGTGTTGAATGTACTGGAAGCGTCCAGGCCA
TGATTTCAGCATTTGAATGCGTTCACGATGGTTGGGGTGTTGCTGTGCTT
GTGGGTGTGCCAAACAAAGATGATGCATTCAAGACTCATCCCATGAATCT
GCTTAATGAGAGGACTCTTAAGGGTACCTTCTTTGGCAACTACAAACCTC
GCTCTGATCTTCCTTCTGTTGTTGAAAAATACATGAACAAGGAGTTGGAG
GTCGAGAAATTCATCACTCACACTGTGCCCTTCTCGGAGATAAACAAGGC
ATTTGACCTCATGCTTGCGGGAGAAAGCATTAGGTGCATCATTCGCATGG
ATGGTTAGATGTGTCTGCTGTTGCTGATCAATCTAATGGAGGCAGAATGA
AGATGATCACATAATTTTCCAAGTTATATATTACCCCGAGAATAAGTAAT
TTATGCTGTATGTTTGATGACTTGCTGCGAATGGCTTTCAAAGAGTTGTG
TTTTCTACATAAAAAAAAA
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