CX078082

Overview
NameCX078082
Unique NameCX078082
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078082 vs. ExPASy Swiss-Prot
Match: CUT1_SCHPO (Separin OS=Schizosaccharomyces pombe GN=cut1 PE=1 SV=3)

HSP 1 Score: 116.701 bits (291), Expect = 1.431e-25
Identity = 66/191 (34.55%), Postives = 87/191 (45.55%), Query Frame = -3
Query:   34 GKAGSAPTAEELTLALKSHDLFIYLGHGSGSQYVSRHDLLKLEKCAATFLMXXXXXXXXXXXCYIPQGTPLSYLLAGSPVIVANLWDVTDKDIDRFGKTMLDAWLRERSSVPMGCDQCSSVQDEAKNGRGKVNKKRMLRKKLPETSDISLCNNGCDHRPKLGSFMGQAREACKLPFLIGAAPVCYGVPTGI 606
            G   S P+  +    L  +D F+Y GHG G QY + +DL  L++CA T LM            + P GTPL YL AG P +VANLWDVTDKDIDRF   ML++W                                +   K P  +  S+C           + + ++R  C L +L GAAPV YG+P  I
Sbjct: 1678 GLIASQPSNRDFIKMLSGNDFFLYFGHGGGEQYTTSYDLATLKRCAVTILMGCSSGALYECGSFEPWGTPLDYLSAGCPTLVANLWDVTDKDIDRFSLKMLESW-------------------------------GLFENKAPFVNSTSIC-----------TAVSESRSCCHLRYLNGAAPVIYGIPAYI 1826          
BLAST of CX078082 vs. ExPASy Swiss-Prot
Match: BIMB_EMENI (Separin OS=Emericella nidulans GN=bimB PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 7.100e-25
Identity = 67/188 (35.64%), Postives = 88/188 (46.81%), Query Frame = -3
Query:   43 GKAGSAPTAEELTLALKSHDLFIYLGHGSGSQYVSRHDLLKLEKCAATFLMXXXXXXXXXXXCYIPQGTPLSYLLAGSPVIVANLWDVTDKDIDRFGKTMLDAWLRERSSVPMGCDQCSSVQDEAKNGRGKVNKKRMLRKKLPETSDISLCNNGCDHRPKLGSFMGQAREACKLPFLIGAAPVCYGVP 606
            G     PT +E   +L+S  LF+Y GHGSG+QY+    + +L++CA  FLM            Y P GTP++YL AGSP +VA LWDVTDKDIDRF K   + W                         G +       + + E                L + + Q+R AC L +L GAAPV YGVP
Sbjct: 1912 GMVNRQPTEDEFKDSLQSKSLFLYFGHGSGAQYIRGRTVKRLDRCAVAFLMGCSSGTLTEAGEYEPYGTPMNYLQAGSPALVATLWDVTDKDIDRFAKATFEHW-------------------------GLIGNGHRGNEGIGEAG------------VALDAAVSQSRGACVLKYLNGAAPVVYGVP 2062          
BLAST of CX078082 vs. ExPASy Swiss-Prot
Match: ESPL1_HUMAN (Separin OS=Homo sapiens GN=ESPL1 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 7.603e-19
Identity = 56/192 (29.17%), Postives = 82/192 (42.71%), Query Frame = -3
Query:   31 GKAGSAPTAEELTLALKSHDLFIYLGHGSGSQYVSRHDLLKLEKCAATFLMXXXXXXXXXXXCYIPQGTPLSYLLAGSPVIVANLWDVTDKDIDRFGKTMLDAWLRERSSVPMGCDQCSSVQDEAKNGRGKVNKKRMLRKKLPETSDISLCNNGCDHRPKLGSFMGQAREACKLPFLIGAAPVCYGVPTGIR 606
            G  G  P  E++  AL  HDL+IY GHG+G++++    +L+L   A   L                 G  L Y++AG P+ + NLWDVTD+DIDR+ + +L  WL      P                                                L  ++ QAR+A +L +LIGAAP+ YG+P  +R
Sbjct: 1977 GVVGEVPRPEQVQEALTKHDLYIYAGHGAGARFLDGQAVLRLSCRAVALLFGCSSAALAVHGNLEGAGIVLKYIMAGCPLFLGNLWDVTDRDIDRYTEALLQGWLGAGPGAP------------------------------------------------LLYYVNQARQAPRLKYLIGAAPIAYGLPVSLR 2120          
BLAST of CX078082 vs. ExPASy Swiss-Prot
Match: ESP1_YEAST (Separin OS=Saccharomyces cerevisiae GN=ESP1 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.585e-16
Identity = 58/182 (31.87%), Postives = 85/182 (46.70%), Query Frame = -3
Query:   43 PTAEELTLALKSHDLFIYLGHGSGSQYVSRHDLLKLEKCAATFLMXXXXXXXXXXXCYIPQGTPLSYLLAGSPVIVANLWDVTDKDIDRFGKTMLDAWLRERSSVPMGCDQCSSVQDEAKNGRGKVNKKRMLRKKLPETSDISLCNNGCDHRPKLGSFMGQAREACKLPFLIGAAPVCYGVP 588
            P  E L   L++ +LF+Y+GHG G QYV   ++ K  K A +FL+              P GT  +YLL G P+++ NLWDVTDKDID+F + + +          MG  +C+                         T D+    NG  +   +   + ++R  C L +L GAAPV YG+P
Sbjct: 1485 PEEETLLKMLQNSNLFVYIGHGGGEQYVRSKEIKKCTKIAPSFLLGCSSAAMKYYGKLEPTGTIYTYLLGGCPMVLGNLWDVTDKDIDKFSEELFE---------KMGF-RCN-------------------------TDDL----NG--NSLSVSYAVSKSRGVCHLRYLNGAAPVIYGLP 1625          
BLAST of CX078082 vs. ExPASy Swiss-Prot
Match: ESPL1_MOUSE (Separin OS=Mus musculus GN=Espl1 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.136e-14
Identity = 38/112 (33.93%), Postives = 58/112 (51.79%), Query Frame = -3
Query:  271 GKAGSAPTAEELTLALKSHDLFIYLGHGSGSQYVSRHDLLKLEKCAATFLMXXXXXXXXXXXCYIPQGTPLSYLLAGSPVIVANLWDVTDKDIDRFGKTMLDAWLRERSSVP 606
            G  G  P+ +++  AL   DL+IY GHG+G++++    +L+L   A   L                 G  L Y++AG P+ + NLWDVTD+DIDR+ + +L  WL      P
Sbjct: 1973 GVIGEVPSLDQVQAALTERDLYIYAGHGAGARFLDGQAVLRLSCRAVALLFGCSSAALAVHGNLEGAGIVLKYIMAGCPLFLGNLWDVTDRDIDRYTEALLQGWLGAGPGAP 2084          
The following BLAST results are available for this feature:
BLAST of CX078082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
CUT1_SCHPO1.431e-2534.55Separin OS=Schizosaccharomyces pombe GN=cut1 PE=1 ... [more]
BIMB_EMENI7.100e-2535.64Separin OS=Emericella nidulans GN=bimB PE=3 SV=2[more]
ESPL1_HUMAN7.603e-1929.17Separin OS=Homo sapiens GN=ESPL1 PE=1 SV=2[more]
ESP1_YEAST1.585e-1631.87Separin OS=Saccharomyces cerevisiae GN=ESP1 PE=1 S... [more]
ESPL1_MOUSE1.136e-1433.93Separin OS=Mus musculus GN=Espl1 PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_6H03_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-6H03-O6-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078082 ID=CX078082; Name=CX078082; organism=Citrus sinensis; type=EST; length=770bp
TTTTTTTTAGTGCTATAAACTTGGTTTTCTTCTTATACCGGTTGGGACAC
CGTAACACACCGGTGCAGCCCCAATCAAGAAAGGGAGTTTACATGCTTCA
CGAGCTTGGCCCATGAATGATCCAAGCTTTGGTCTATGATCACAACCATT
GTTACATAAACTAATATCCGAAGTTTCAGGTAATTTCTTCCGCAACATTC
TTTTTTTGTTAACTTTGCCTCTTCCGTTCTTGGCCTCATCTTGAACTGAA
GAGCATTGGTCACAGCCCATGGGAACACTTGACCTTTCCCTTAACCAAGC
ATCAAGCATGGTCTTCCCAAAACGGTCTATGTCCTTGTCTGTAACGTCCC
AAAGGTTGGCAACAATTACAGGGGACCCGGCTAGCAGATAGGACAGAGGA
GTACCTTGCGGAATGTAACAACCGTTTAATGACAAAGAACCACTACTGCA
TCCCATCAAGAAAGTAGCAGCACACTTCTCCAGCTTCAGAAGATCATGCC
TAGAAACGTATTGTGAACCACTTCCATGGCCAAGATATATGAAGAGGTCA
TGGCTTTTCAAGGCTAGAGTCAGTTCTTCAGCTGTGGGTGCAGATCCAGC
CTTCCCTTATTAGTGCATGTTTATGTCCACAAGAAAGTGCAGAGCAATGG
GTCTACAATGTGATTTTAAGATCTGGCCTTTCTATCATGCTCTTTCTTAC
AAAAGGCCAGATCAGACATACCACCAAATTTTGATCTCTAAACCAGTCCT
CAAACAGAAGTTGTGTTTCG
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