CX077975

Overview
NameCX077975
Unique NameCX077975
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length848
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3018 contig Csv1_Contig3018:39..887. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX077975 vs. ExPASy Swiss-Prot
Match: ADH1_PETHY (Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 7.561e-87
Identity = 156/175 (89.14%), Postives = 168/175 (96.00%), Query Frame = -3
Query:  325 AVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDY-DKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 846
            AVGLAAAEGAR++GASRIIGVDLNPSRFN+AKKFGVTEFVNPKD+ DKPVQQVIAEMT+GGVDRSVECTG+V AMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKP+SD+PSVV+KYM KE+ELEKFITH VPFSEINKAFD ML GESIRC+I M+
Sbjct:  207 AVGLAAAEGARIAGASRIIGVDLNPSRFNDAKKFGVTEFVNPKDHGDKPVQQVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPKSDIPSVVDKYMKKELELEKFITHQVPFSEINKAFDYMLKGESIRCMITME 381          
BLAST of CX077975 vs. ExPASy Swiss-Prot
Match: ADH1_SOLTU (Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 2.059e-84
Identity = 149/174 (85.63%), Postives = 163/174 (93.68%), Query Frame = -3
Query:  325 AVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 846
            AVGLAAAEGAR++GASRIIGVDLN SRF +AKKFGVTEFVNPKDY KPVQ+VIAEMT+GGVDRSVECTG + AMISAFECVHDGWGVAVLVGVP+K+  FKTHPMNLLNERTLKGTFFGNYKPRSD+PSVVEKYMNKE+ELEKFITH +PF+EINKAFDLML GE +RCII M+
Sbjct:  206 AVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPMNLLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITME 379          
BLAST of CX077975 vs. ExPASy Swiss-Prot
Match: ADH1_PEA (Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 3.512e-84
Identity = 151/174 (86.78%), Postives = 163/174 (93.68%), Query Frame = -3
Query:  325 AVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 846
            AVGLAAAEGAR+SGASRIIGVDL  SRF  AKKFGV EFVNPK++DKPVQQVIAEMTNGGVDR+VECTGS+QAMISAFECVHDGWGVAVLVGVP+KDDAFKTHPMN LNERTLKGTF+GNYKPR+DLP+VVEKYM  E+ELEKFITH VPFSEINKAFD ML GESIRCII+M+
Sbjct:  206 AVGLAAAEGARISGASRIIGVDLVSSRFELAKKFGVNEFVNPKEHDKPVQQVIAEMTNGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPSKDDAFKTHPMNFLNERTLKGTFYGNYKPRTDLPNVVEKYMKGELELEKFITHTVPFSEINKAFDYMLKGESIRCIIKME 379          
BLAST of CX077975 vs. ExPASy Swiss-Prot
Match: ADH3_SOLTU (Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 5.991e-84
Identity = 148/174 (85.06%), Postives = 162/174 (93.10%), Query Frame = -3
Query:  325 AVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 846
            AVGLAAAEGAR++GASRIIGVDLN SRF +AKKFGVTEFVNPKDY KPVQ+VIAEMT+GGVDRSVECTG + AMISAFECVHDGWGVAVLVGVP+K+  FKTHPMN LNERTLKGTFFGNYKPRSD+PSVVEKYMNKE+ELEKFITH +PF+EINKAFDLML GE +RCII M+
Sbjct:  206 AVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITME 379          
BLAST of CX077975 vs. ExPASy Swiss-Prot
Match: ADH2_SOLTU (Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 5.991e-84
Identity = 148/174 (85.06%), Postives = 162/174 (93.10%), Query Frame = -3
Query:  325 AVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 846
            AVGLAAAEGAR++GASRIIGVDLN SRF +AKKFGVTEFVNPKDY KPVQ+VIAEMT+GGVDRSVECTG + AMISAFECVHDGWGVAVLVGVP+K+  FKTHPMN LNERTLKGTFFGNYKPRSD+PSVVEKYMNKE+ELEKFITH +PF+EINKAFDLML GE +RCII M+
Sbjct:  206 AVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITME 379          
BLAST of CX077975 vs. ExPASy Swiss-Prot
Match: ADH1_ARATH (Alcohol dehydrogenase class-P OS=Arabidopsis thaliana GN=ADH1 PE=1 SV=2)

HSP 1 Score: 310.071 bits (793), Expect = 1.022e-83
Identity = 148/173 (85.55%), Postives = 161/173 (93.06%), Query Frame = -3
Query:  328 AVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 846
            AVGL AAEGAR++GASRIIGVD N  RF++AK+FGVTE VNPKD+DKP+QQVIAEMT+GGVDRSVECTGSVQAMI AFECVHDGWGVAVLVGVP+KDDAFKTHPMN LNERTLKGTFFGNYKP++D+P VVEKYMNKE+ELEKFITH VPFSEINKAFD ML GESIRCII M
Sbjct:  205 AVGLGAAEGARIAGASRIIGVDFNSKRFDQAKEFGVTECVNPKDHDKPIQQVIAEMTDGGVDRSVECTGSVQAMIQAFECVHDGWGVAVLVGVPSKDDAFKTHPMNFLNERTLKGTFFGNYKPKTDIPGVVEKYMNKELELEKFITHTVPFSEINKAFDYMLKGESIRCIITM 377          
BLAST of CX077975 vs. ExPASy Swiss-Prot
Match: ADH1_TRIRP (Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH1 PE=2 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 1.335e-83
Identity = 150/174 (86.21%), Postives = 163/174 (93.68%), Query Frame = -3
Query:  325 AVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 846
            AVGLAAAEGAR+SGASRIIGVDL  SRF  AKKFGV EFVNPKD+DKPVQQVIAEMT+GGVDR+VECTGS+QAMISAFECVHDGWGVAVLVGVP KDDAFKTHPMN LNERTLKGTF+GNYKPR+DLP+VVE+YM  E+ELEKFITH++PFSEINKAFD ML GESIRCIIRM+
Sbjct:  206 AVGLAAAEGARMSGASRIIGVDLVSSRFELAKKFGVNEFVNPKDHDKPVQQVIAEMTDGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPKKDDAFKTHPMNFLNERTLKGTFYGNYKPRTDLPNVVEQYMKGELELEKFITHSIPFSEINKAFDYMLKGESIRCIIRME 379          
BLAST of CX077975 vs. ExPASy Swiss-Prot
Match: ADH2_SOLLC (Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN=ADH2 PE=2 SV=2)

HSP 1 Score: 306.99 bits (785), Expect = 8.651e-83
Identity = 146/173 (84.39%), Postives = 160/173 (92.49%), Query Frame = -3
Query:  328 AVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 846
            AVGLAAAEGAR++GASRIIGVDLN SRF +AKKFGVTEFVNPKDY KPVQ+VIAEMT+GGVDRSVECTG + AMISAFECVHDGWGVAVLVGVP+K+  FKTHP+N LNERTLKGTFFGNYKPRSD+P VVEKYMNKE+ELEKFITH +PF+EINKAFDLML GE +RCII M
Sbjct:  206 AVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPLNFLNERTLKGTFFGNYKPRSDIPCVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITM 378          
BLAST of CX077975 vs. ExPASy Swiss-Prot
Match: ADH1_MAIZE (Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 8.651e-83
Identity = 145/174 (83.33%), Postives = 162/174 (93.10%), Query Frame = -3
Query:  325 AVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 846
            AVGLAAAEGAR++GASRIIGVDLNPSRF EA+KFG TEFVNPKD++KPVQ+V+AEMTNGGVDRSVECTG++ AMI AFECVHDGWGVAVLVGVP+KD  FKTHPMN LNERTLKGTFFGNYKPR+DLP+VVE YM KE+E+EKFITH+VPF+EINKAFDLM  GE IRCIIRM+
Sbjct:  205 AVGLAAAEGARIAGASRIIGVDLNPSRFEEARKFGCTEFVNPKDHNKPVQEVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFAEINKAFDLMAKGEGIRCIIRME 378          
BLAST of CX077975 vs. ExPASy Swiss-Prot
Match: ADH1_PENAM (Alcohol dehydrogenase 1 OS=Pennisetum americanum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 1.130e-82
Identity = 145/174 (83.33%), Postives = 162/174 (93.10%), Query Frame = -3
Query:  325 AVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 846
            AVGLAAAEGAR++GASRIIGVDLNPSRF EAKKFG TEFVNPKD++KPVQ+V+A+MTNGGVDRSVECTG++ AMI AFECVHDGWGVAVLVGVP+KD  FKTHPMN LNERTLKGTFFGN+KPR+DLP+VVE YM KE+E+EKFITH+VPFSEINKAFDLM  GE IRCIIRM+
Sbjct:  205 AVGLAAAEGARIAGASRIIGVDLNPSRFEEAKKFGCTEFVNPKDHNKPVQEVLADMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNFKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINKAFDLMAKGEGIRCIIRME 378          
The following BLAST results are available for this feature:
BLAST of CX077975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
ADH1_PETHY7.561e-8789.14Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1... [more]
ADH1_SOLTU2.059e-8485.63Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=AD... [more]
ADH1_PEA3.512e-8486.78Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1[more]
ADH3_SOLTU5.991e-8485.06Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=AD... [more]
ADH2_SOLTU5.991e-8485.06Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=AD... [more]
ADH1_ARATH1.022e-8385.55Alcohol dehydrogenase class-P OS=Arabidopsis thali... [more]
ADH1_TRIRP1.335e-8386.21Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH... [more]
ADH2_SOLLC8.651e-8384.39Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN... [more]
ADH1_MAIZE8.651e-8383.33Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 S... [more]
ADH1_PENAM1.130e-8283.33Alcohol dehydrogenase 1 OS=Pennisetum americanum G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_6B08_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-6B08-C16-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077975 ID=CX077975; Name=CX077975; organism=Citrus sinensis; type=EST; length=848bp
TTTTTTTTTTTTTTTTTATAAGAAAGAAGATTTACACGAAAATCTTTATT
ACATAAGCTACAAAAAGAAGTACAGTAAGAAATAGGTAGAAAACACACCT
CTTTGTACGCCATATGCAGCAAGTCATCAAACAGAAAAACAAAAATAAAA
AGGGACTGTAAGAAATATGTAGAAAACACAACTCTTTGAAAGCCATTCGC
AGCAAGTCATCAAACATACAGCATAAATTACTTATTCTCGGGGTAATATA
TAACTTGGAAAATTATGTGATCATCTTCATTCTGCCTCCATTAGATTGAT
CAGCAACAGCAGACACATCTAACCATCCATGCGAATGATGCACCTAATGC
TTTCTCCCGAAAGCATGAGGTCAAATGCCTTGTTTATCTCCGAGAAGGGC
ACAGCATGAGTGATGAATTTCTCAAGCTCCATCTCCTTGTTCATGTATTT
TTCAACAACTGAAGGAAGATCAGAGCGAGGTTTGTAGTTGCCAAAGAAGG
TACCCTTAAGAGTCCTCTCATTAAGCAGATTCATGGGATGAGTCTTGAAT
GCATCATCTTTGTTTGGCACACCCACAAGCACAGCAACACCCCAACCATC
GTGAACGCATTCAAATGCTGAGATCATGGCCTGGACGCTTCCAGTACATT
CAACACTTCTATCCACTCCACCATTGGTCATTTCAGCAATCACCTGTTGA
ACAGGTTTGTCATAATCTTTTGGATTCACAAACTCGGTAACCCCAAACTT
CTTGGCTTCATTGAATCTGCTTGGGTTCAAATCAACACCAATGATCCTGG
AAGCCCCTGATACTCTTGCCCCTTCGGCAGCAGCAAGGCCAACTGCAC
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