CX077969
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX077969 vs. ExPASy Swiss-Prot
Match: TCPG_OXYGR (T-complex protein 1 subunit gamma OS=Oxytricha granulifera PE=3 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 1.884e-75 Identity = 135/210 (64.29%), Postives = 168/210 (80.00%), Query Frame = -1 Query: 254 GAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANG-ENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQ 880 GA I NRP+ELQESDVGT GLFE+KKIGDE+F+F+ C++PKAC++LLRGASKD+LNE+ERNL DA+ VARN++ NPKLVPGGGA E+ ++ L + S IEG+++WP++A A A E IPRTLAQNCG +V+R MT L+ KHAN E + GIDGNTG I DM+E +WD +VK QT KT+IEA CMLLRIDDIVSGIKK + G+GQ Sbjct: 330 GATIANRPEELQESDVGTKCGLFEIKKIGDEYFSFMTKCENPKACSILLRGASKDVLNEIERNLHDALGVARNVMVNPKLVPGGGAIEMELACRLMEFSQKIEGMQQWPFKALAGALEVIPRTLAQNCGADVVRVMTELRAKHANDKEGLYWGIDGNTGKIRDMRESNVWDPISVKQQTLKTSIEATCMLLRIDDIVSGIKKDKRGGAGQ 539
BLAST of CX077969 vs. ExPASy Swiss-Prot
Match: TCPG_XENLA (T-complex protein 1 subunit gamma OS=Xenopus laevis GN=cct3 PE=2 SV=2) HSP 1 Score: 269.24 bits (687), Expect = 2.156e-71 Identity = 132/224 (58.93%), Postives = 167/224 (74.55%), Query Frame = -1 Query: 218 ACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHA-NGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSKPQIETEAD 886 ACGA I +R DEL+E DVGTGAGLFE+KKIGDE+F FI DCKDPKACT++LRGASK++L EVERNLQDAM V RN++ +P LVPGGGA+E++V+ L +KS ++ G+E+WPY A A A E IPRTL QNCG + IR +T+L+ KH G W G+DG G ++DMKE IW+ VK QT+KTA+E A +LLRIDDIVSG KKK Q + P+ +A+ Sbjct: 325 ACGARIASRTDELREEDVGTGAGLFEIKKIGDEYFTFITDCKDPKACTIVLRGASKEILAEVERNLQDAMQVCRNVVIDPYLVPGGGASEMSVAHILTEKSKTMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRILTSLRAKHTQEGCQTW-GVDGEAGVLADMKELGIWEPLAVKLQTYKTAVETAILLLRIDDIVSGHKKKGEDHGRQPAAAPEAPQQAE 547
BLAST of CX077969 vs. ExPASy Swiss-Prot
Match: TCPG_RAT (T-complex protein 1 subunit gamma OS=Rattus norvegicus GN=Cct3 PE=1 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 2.156e-71 Identity = 132/219 (60.27%), Postives = 165/219 (75.34%), Query Frame = -1 Query: 254 ACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK--------QAPGSGQ 886 ACGA IV+RP+EL+E DVGTGAGL E+KKIGDE+F FI DCKDPKACT+LLRGASK++L+EVERNLQDAM V RN++ +P+LVPGGGA+E+ V+ L +KS ++ G+E+WPY A A A E IPRTL QNCG + IR +T+L+ KH G++G TG + DMKE IW+ VK QT+KTA+E A +LLRIDDIVSG KKK AP +GQ Sbjct: 326 ACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQNRQTGAPDAGQ 544
BLAST of CX077969 vs. ExPASy Swiss-Prot
Match: TCPG_PONAB (T-complex protein 1 subunit gamma OS=Pongo abelii GN=CCT3 PE=2 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 2.156e-71 Identity = 132/219 (60.27%), Postives = 165/219 (75.34%), Query Frame = -1 Query: 254 ACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK--------QAPGSGQ 886 ACGA IV+RP+EL+E DVGTGAGL E+KKIGDE+F FI DCKDPKACT+LLRGASK++L+EVERNLQDAM V RN++ +P+LVPGGGA+E+ V+ L +KS ++ G+E+WPY A A A E IPRTL QNCG + IR +T+L+ KH G++G TG + DMKE IW+ VK QT+KTA+E A +LLRIDDIVSG KKK AP +GQ Sbjct: 326 ACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQSRQGGAPDAGQ 544
BLAST of CX077969 vs. ExPASy Swiss-Prot
Match: TCPG_MOUSE (T-complex protein 1 subunit gamma OS=Mus musculus GN=Cct3 PE=1 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 2.156e-71 Identity = 132/219 (60.27%), Postives = 165/219 (75.34%), Query Frame = -1 Query: 254 ACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK--------QAPGSGQ 886 ACGA IV+RP+EL+E DVGTGAGL E+KKIGDE+F FI DCKDPKACT+LLRGASK++L+EVERNLQDAM V RN++ +P+LVPGGGA+E+ V+ L +KS ++ G+E+WPY A A A E IPRTL QNCG + IR +T+L+ KH G++G TG + DMKE IW+ VK QT+KTA+E A +LLRIDDIVSG KKK AP +GQ Sbjct: 326 ACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQESCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQNRQTGAPDAGQ 544
BLAST of CX077969 vs. ExPASy Swiss-Prot
Match: TCPG_HUMAN (T-complex protein 1 subunit gamma OS=Homo sapiens GN=CCT3 PE=1 SV=4) HSP 1 Score: 269.24 bits (687), Expect = 2.156e-71 Identity = 132/219 (60.27%), Postives = 165/219 (75.34%), Query Frame = -1 Query: 254 ACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK--------QAPGSGQ 886 ACGA IV+RP+EL+E DVGTGAGL E+KKIGDE+F FI DCKDPKACT+LLRGASK++L+EVERNLQDAM V RN++ +P+LVPGGGA+E+ V+ L +KS ++ G+E+WPY A A A E IPRTL QNCG + IR +T+L+ KH G++G TG + DMKE IW+ VK QT+KTA+E A +LLRIDDIVSG KKK AP +GQ Sbjct: 326 ACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQSRQGGAPDAGQ 544
BLAST of CX077969 vs. ExPASy Swiss-Prot
Match: TCPG_BOVIN (T-complex protein 1 subunit gamma OS=Bos taurus GN=CCT3 PE=2 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 6.272e-71 Identity = 131/219 (59.82%), Postives = 165/219 (75.34%), Query Frame = -1 Query: 254 ACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK--------QAPGSGQ 886 ACGA IV+RP+EL+E DVGTGAGL E+KKIGDE+F FI +CKDPKACT+LLRGASK++L+EVERNLQDAM V RN++ +P+LVPGGGA+E+ V+ L +KS ++ G+E+WPY A A A E IPRTL QNCG + IR +T+L+ KH G++G TG + DMKE IW+ VK QT+KTA+E A +LLRIDDIVSG KKK AP +GQ Sbjct: 326 ACGARIVSRPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQSRQGGAPDAGQ 544
BLAST of CX077969 vs. ExPASy Swiss-Prot
Match: TCPG_TETPY (T-complex protein 1 subunit gamma OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 1.070e-70 Identity = 126/208 (60.58%), Postives = 166/208 (79.81%), Query Frame = -1 Query: 257 GAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSG 880 GA IVNRP+E+QESDVG GLFEVK IGDE+F F+ +C++P+AC+++LRGASKD+LNE+ERNL D ++VA+NI NPKLVPGGGA E+ VS+ L++ SSSIEG+ + P+ A A A EAIP+TLAQNCGV+V+R +T L+ KH N +IGI+GN+G I+DM E +W+ VK Q +KTAIE+ACMLLRIDD+VSG+KK++ G Sbjct: 331 GATIVNRPEEIQESDVGKKCGLFEVKLIGDEYFTFMTECENPEACSIILRGASKDVLNEMERNLHDCLAVAKNIFVNPKLVPGGGAIEMEVSSHLEKISSSIEGLHQLPFRAVAYALEAIPKTLAQNCGVDVVRNITELRAKHNQEGNKFIGIEGNSGKITDMGEANVWEPIAVKLQVYKTAIESACMLLRIDDVVSGLKKQKVAKGG 538
BLAST of CX077969 vs. ExPASy Swiss-Prot
Match: TCPG_MACFA (T-complex protein 1 subunit gamma OS=Macaca fascicularis GN=CCT3 PE=2 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 1.825e-70 Identity = 130/219 (59.36%), Postives = 165/219 (75.34%), Query Frame = -1 Query: 254 ACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK--------QAPGSGQ 886 ACGA IV+RP+EL+E DVGTGAGL E+KKIGDE+F FI +CKDPKACT+LLRGASK++L+EVERNLQDAM V RN++ +P+LVPGGGA+E+ V+ L +KS ++ G+E+WPY A A A E IPRTL QNCG + IR +T+L+ KH G++G TG + D+KE IW+ VK QT+KTA+E A +LLRIDDIVSG KKK AP +GQ Sbjct: 326 ACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDVKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQSRQGGAPDAGQ 544
BLAST of CX077969 vs. ExPASy Swiss-Prot
Match: TCPG_SCHPO (T-complex protein 1 subunit gamma OS=Schizosaccharomyces pombe GN=cct3 PE=1 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 6.935e-70 Identity = 124/203 (61.08%), Postives = 160/203 (78.82%), Query Frame = -1 Query: 278 ACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKK 886 ACGA IVNR ++L+E DVGTG GLF + K+GDE++ F+ CK+PKACT+LLRG SKD++NEVERNLQDAM+VARN+ +PKL PGGGATE+ VS L +K+ SIEG+ +WPY A A A E IPRTL QNCG N I+ +T L+ KHA G++++ GIDG TG + DM E +W+ VK Q+ KTAIE+AC+LLR+DDIVSG++K Sbjct: 324 ACGANIVNRLEDLREKDVGTGCGLFYIDKLGDEYYTFLTGCKNPKACTILLRGPSKDIINEVERNLQDAMAVARNVFFHPKLSPGGGATEMAVSVRLAEKARSIEGVAQWPYRAVADAIEIIPRTLVQNCGANPIKALTELRAKHAEGQHSF-GIDGETGRVVDMHEYGVWEPEAVKLQSIKTAIESACLLLRVDDIVSGVRK 525 The following BLAST results are available for this feature:
BLAST of CX077969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
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Sequences
The
following sequences are available for this feature:
EST sequence >CX077969 ID=CX077969; Name=CX077969; organism=Citrus sinensis; type=EST; length=886bpback to top |